Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G025400 Manihot esculenta HOM05D008361 ORTHO05D010527 8.3e-103 377.1 197 100.0
Ciclev10024020m.g Citrus clementina HOM05D008361 ORTHO05D010527 1.6e-66 256.5 214 66.8
QL12p017696 Quercus lobata HOM05D008361 ORTHO05D010527 2.6e-64 249.2 202 64.9
TWI81G0130 Tripterygium wilfordii HOM05D008361 ORTHO05D010527 4.9e-63 245.0 204 63.7
Dinv38990 Davidia involucrata HOM05D008361 ORTHO05D010527 5.1e-60 235.0 204 63.7
Potri.001G102600 Populus trichocarpa HOM05D008361 ORTHO05D010527 5.1e-60 235.0 203 64.5
Thecc.03G273500 Theobroma cacao HOM05D008361 ORTHO05D010527 2.6e-56 222.6 198 62.1
Duzib084G0204 Durio zibethinus HOM05D008361 ORTHO05D010527 2.4e-54 216.1 205 58.5
Sabra01G0077700 Salix brachista HOM05D008361 ORTHO05D010527 4.2e-54 215.3 204 60.8
Rhsim07G0093200 Rhododendron simsii HOM05D008361 ORTHO05D010527 7.1e-54 214.5 200 62.5
Atru.chr9.1564 Acer truncatum HOM05D008361 ORTHO05D010527 1.2e-53 213.8 189 63.0
vmacro13932 Vaccinium macrocarpon HOM05D008361 ORTHO05D010527 3.5e-53 212.2 200 60.5
PGR031G0074 Punica granatum HOM05D008361 ORTHO05D010527 4.6e-53 211.8 189 63.5
Gorai.004G209100 Gossypium raimondii HOM05D008361 ORTHO05D010527 1.6e-50 203.4 207 58.0
TAR629G3045 Trochodendron aralioides HOM05D008361 ORTHO05D010527 4.8e-50 201.8 202 56.9
Hma1.2p1_0514F.1_g169930 Hydrangea macrophylla HOM05D008361 ORTHO05D010527 1.4e-49 200.3 162 66.7
Peaxi162Scf00714g00330 Petunia axillaris HOM05D008361 ORTHO05D010527 6.9e-49 198.0 226 54.4
Oeu029779.2 Olea europaea HOM05D008361 ORTHO05D010527 4.9e-47 191.8 197 55.8
GSVIVG01019832001 Vitis vinifera HOM05D008361 ORTHO05D010527 2.7e-45 186.0 223 50.7
CANSAT21G0386 Cannabis sativa HOM05D008361 ORTHO05D010527 3.5e-45 185.7 187 55.1
Sopen08g028880 Solanum pennellii HOM05D008361 ORTHO05D010527 4.6e-45 185.3 209 55.0
Gohir.D12G228400 Gossypium hirsutum HOM05D008361 ORTHO05D010527 3.9e-44 182.2 204 53.9
Gohir.A12G225900 Gossypium hirsutum HOM05D008361 ORTHO05D010527 1.3e-42 177.2 206 52.9
THA.LOC104806378 Tarenaya hassleriana HOM05D008361 ORTHO05D010527 1.4e-41 173.7 222 50.9
PSO478G1996 Papaver somniferum HOM05D008361 ORTHO05D010527 5.3e-41 171.8 192 51.6
Gohir.A08G179550 Gossypium hirsutum HOM05D008361 ORTHO05D010527 9.0e-41 171.0 197 54.8
Nn1g01412 Nelumbo nucifera HOM05D008361 ORTHO05D010527 3.4e-40 169.1 190 56.8
PSO782G5127 Papaver somniferum HOM05D008361 ORTHO05D010527 3.4e-40 169.1 192 51.0
Eucgr.D01907 Eucalyptus grandis HOM05D008361 ORTHO05D010527 1.3e-39 167.2 162 56.8
Cpa.g.sc74.67 Carica papaya HOM05D008361 ORTHO05D010527 1.9e-38 163.3 173 56.1
Gohir.D08G198300 Gossypium hirsutum HOM05D008361 ORTHO05D010527 9.3e-38 161.0 207 50.7
Lsat_1_v5_gn_3_8380 Lactuca sativa HOM05D008361 ORTHO05D010527 3.5e-37 159.1 202 50.0
Actinidia27400 Actinidia chinensis HOM05D008361 ORTHO05D010527 4.6e-37 158.7 158 57.6
CARHR254730 Cardamine hirsuta HOM05D008361 ORTHO05D010527 6.1e-37 158.3 201 48.8
Thhalv10028959m.g Eutrema salsugineum HOM05D008361 ORTHO05D010527 5.7e-35 151.8 213 46.9
AL6G46250 Arabidopsis lyrata HOM05D008361 ORTHO05D010527 1.3e-34 150.6 206 47.6
BcaB01g01669 Brassica carinata HOM05D008361 ORTHO05D010527 2.2e-34 149.8 201 48.3
HanXRQChr05g0132741 Helianthus annuus HOM05D008361 ORTHO05D010527 2.8e-34 149.4 208 45.2
Sp6g05820 Schrenkiella parvula HOM05D008361 ORTHO05D010527 3.7e-34 149.1 197 48.7
Migut.A00801 Erythranthe guttata HOM05D008361 ORTHO05D010527 4.8e-34 148.7 185 49.2
AT4G11655 Arabidopsis thaliana HOM05D008361 ORTHO05D010527 6.3e-34 148.3 195 49.2
A09p27520 Brassica napus HOM05D008361 ORTHO05D010527 6.3e-34 148.3 219 44.3
BraA09t38320Z Brassica rapa HOM05D008361 ORTHO05D010527 6.3e-34 148.3 219 44.3
C09p34810 Brassica napus HOM05D008361 ORTHO05D010527 8.2e-34 147.9 200 46.5
BolC9t56327H Brassica oleracea HOM05D008361 ORTHO05D010527 8.2e-34 147.9 200 46.5
Nitab4.5_0010472g0040 Nicotiana tabacum HOM05D008361 ORTHO05D010527 3.1e-33 146.0 170 54.1
Carub.0006s3074 Capsella rubella HOM05D008361 ORTHO05D010527 9.0e-33 144.4 198 49.5
Gorai.008G244500 Gossypium raimondii HOM05D008361 ORTHO05D010527 2.1e-29 133.3 157 49.7
ECA236G4060 Erigeron canadensis HOM05D008361 ORTHO05D010527 4.3e-27 125.6 144 51.4
CDE11G0059 Ceratophyllum demersum HOM05D008361 ORTHO05D010527 2.2e-26 123.2 202 41.1
SalBow1G8630 Salvia bowleyana HOM05D008361 ORTHO05D010527 5.0e-23 112.1 129 51.9
CDE04G2251 Ceratophyllum demersum HOM05D008361 ORTHO05D010527 2.2e-18 96.7 187 38.0
MBI16_g06253_MAGBIO Magnolia biondii HOM05D008361 ORTHO05D010527 1.2e-16 90.9 110 46.4
COL.COLO4_34416 Corchorus olitorius HOM05D008361 ORTHO05D010527 2.1e-13 80.1 98 55.1
ATR0317G124 Amborella trichopoda HOM05D008361 ORTHO05D010527 3.0e-12 76.3 196 37.2
SEGI_30233 Sequoiadendron giganteum HOM05D001228 ORTHO05D003869 9.7e-11 71.2 165 33.9
SEGI_01255 Sequoiadendron giganteum HOM05D001228 ORTHO05D003869 1.7e-10 70.5 147 36.7
Glyma.06G183000 Glycine max HOM05D001228 ORTHO05D002377 1.2e-08 64.3 161 30.4
CsaV3_1G001550 Cucumis sativus L. HOM05D001228 ORTHO05D002377 2.0e-08 63.5 126 34.9
VMungo1309G1620 Vigna mungo HOM05D001228 ORTHO05D002377 2.0e-08 63.5 185 29.7
SalBow5G1632 Salvia bowleyana HOM05D001228 ORTHO05D002377 2.6e-08 63.2 149 32.9
SalBow5G2380 Salvia bowleyana HOM05D001228 ORTHO05D002377 2.6e-08 63.2 149 32.9
ClCG06G016960 Citrullus lanatus HOM05D001228 ORTHO05D002377 3.5e-08 62.8 126 34.9
MELO3C017095.2 Cucumis melo HOM05D001228 ORTHO05D002377 3.5e-08 62.8 126 34.9
SEGI_01953 Sequoiadendron giganteum HOM05D001228 ORTHO05D003869 1.0e-07 61.2 155 32.3
Oeu016371.1 Olea europaea HOM05D001228 ORTHO05D002377 1.3e-07 60.8 187 29.9
Gorai.002G266800 Gossypium raimondii HOM05D001228 ORTHO05D003869 1.7e-07 60.5 170 34.1
ATR0594G080 Amborella trichopoda HOM05D001228 ORTHO05D003869 2.9e-07 59.7 199 31.7
Aqoxy4G02713 Aquilegia oxysepala HOM05D001228 ORTHO05D003869 5.0e-07 58.9 154 30.5
BcaB02g09360 Brassica carinata HOM05D001228 ORTHO05D002377 5.0e-07 58.9 152 32.9
Migut.I00019 Erythranthe guttata HOM05D001228 ORTHO05D002377 5.0e-07 58.9 149 32.9
Manes.17G121200 Manihot esculenta HOM05D001228 ORTHO05D002377 5.0e-07 58.9 143 32.2
SEGI_06720 Sequoiadendron giganteum HOM05D001228 ORTHO05D002377 5.0e-07 58.9 192 29.2
RcHm_v2.0_Chr2g0171451 Rosa chinensis HOM05D001228 ORTHO05D002377 6.5e-07 58.5 144 31.2
Sp4g18580 Schrenkiella parvula HOM05D001228 ORTHO05D002377 6.5e-07 58.5 152 32.9
Aqoxy3G02962 Aquilegia oxysepala HOM05D001228 ORTHO05D002377 8.5e-07 58.2 166 28.3
BcaC02g11749 Brassica carinata HOM05D001228 ORTHO05D002377 1.1e-06 57.8 152 32.2
Ca_07712_v3 Cicer arietinum L. HOM05D001228 ORTHO05D003869 1.1e-06 57.8 182 30.2
Glyma.04G181900 Glycine max HOM05D001228 ORTHO05D002377 1.1e-06 57.8 176 29.0
Lsat_1_v5_gn_5_17320 Lactuca sativa HOM05D001228 ORTHO05D002377 1.1e-06 57.8 153 32.0
CDE06G1654 Ceratophyllum demersum HOM05D001228 ORTHO05D002377 1.5e-06 57.4 146 31.5
ECA246G2365 Erigeron canadensis HOM05D001228 ORTHO05D002377 1.5e-06 57.4 160 30.6
Sc04g0001840 Simmondsia chinensis HOM05D001228 ORTHO05D002377 1.5e-06 57.4 126 32.5
TAR374G0262 Trochodendron aralioides HOM05D001228 ORTHO05D002377 1.5e-06 57.4 158 31.0
Carub.0004s1811 Capsella rubella HOM05D001228 ORTHO05D002377 1.9e-06 57.0 152 31.6
COL.COLO4_14441 Corchorus olitorius HOM05D001228 ORTHO05D003869 1.9e-06 57.0 177 31.6
unitig_27.g24875 Utricularia gibba HOM05D001228 ORTHO05D003869 1.9e-06 57.0 158 28.5
CsaV3_5G037240 Cucumis sativus L. HOM05D001228 ORTHO05D002377 2.5e-06 56.6 148 31.8
Prupe.3G284200 Prunus persica HOM05D001228 ORTHO05D002377 2.5e-06 56.6 144 31.2
Prupe.5G174700 Prunus persica HOM05D001228 ORTHO05D002377 2.5e-06 56.6 160 28.8
unitig_744.g24401 Utricularia gibba HOM05D001228 ORTHO05D002377 2.5e-06 56.6 148 33.1
Aa31LG5G21500 Aethionema arabicum HOM05D001228 ORTHO05D002377 3.2e-06 56.2 152 31.6
Gohir.D01G220101 Gossypium hirsutum HOM05D001228 ORTHO05D003869 3.2e-06 56.2 170 33.5
Medtr4g013270 Medicago truncatula HOM05D001228 ORTHO05D003869 3.2e-06 56.2 154 29.2
Nn4g22785 Nelumbo nucifera HOM05D001228 ORTHO05D002377 3.2e-06 56.2 146 32.9
DCAR_018663 Daucus carota HOM05D001228 ORTHO05D003869 4.2e-06 55.8 196 29.1
Nn2g13279 Nelumbo nucifera HOM05D001228 ORTHO05D003869 4.2e-06 55.8 195 29.2
ATR0730G035 Amborella trichopoda HOM05D001228 ORTHO05D002377 5.5e-06 55.5 144 34.7
Ca_26733_v3 Cicer arietinum L. HOM05D001228 ORTHO05D002377 5.5e-06 55.5 145 33.8
Gohir.D07G226600 Gossypium hirsutum HOM05D001228 ORTHO05D002377 5.5e-06 55.5 144 31.9
Sed0004923 Sechium edule HOM05D001228 ORTHO05D002377 5.5e-06 55.5 148 31.1
Actinidia19096 Actinidia chinensis HOM05D001228 ORTHO05D002377 7.2e-06 55.1 152 31.6
CANSAT64G1579 Cannabis sativa HOM05D001228 ORTHO05D002377 7.2e-06 55.1 148 33.1
Duzib147G0423 Durio zibethinus HOM05D001228 ORTHO05D002377 7.2e-06 55.1 144 31.9
MD12G1180900 Malus domestica HOM05D001228 ORTHO05D003869 7.2e-06 55.1 154 31.8
Psat3g123520 Pisum sativum HOM05D001228 ORTHO05D003869 7.2e-06 55.1 183 28.4
TPR.G1678 Trifolium pratense HOM05D001228 ORTHO05D002377 7.2e-06 55.1 146 31.5
Gorai.001G261500 Gossypium raimondii HOM05D001228 ORTHO05D002377 9.4e-06 54.7 144 31.9
HanXRQChr10g0295771 Helianthus annuus HOM05D001228 ORTHO05D002377 9.4e-06 54.7 158 31.0
Lsat_1_v5_gn_8_103660 Lactuca sativa HOM05D001228 ORTHO05D003869 9.4e-06 54.7 157 28.7
Thecc.03G010800 Theobroma cacao HOM05D001228 ORTHO05D002377 9.4e-06 54.7 152 28.3
Thecc.05G005700 Theobroma cacao HOM05D001228 ORTHO05D003869 9.4e-06 54.7 168 31.0


User provided reference genes

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