Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G024700 Manihot esculenta HOM05D008852 ORTHO05D010731 3.0e-44 181.4 88 100.0
Manes.01G064900 Manihot esculenta HOM05D008852 ORTHO05D010731 3.9e-28 127.9 87 74.7
Potri.001G107400 Populus trichocarpa HOM05D008852 ORTHO05D010731 8.4e-23 110.2 85 63.5
Potri.003G124000 Populus trichocarpa HOM05D008852 ORTHO05D010731 7.1e-22 107.1 85 61.2
Ciclev10023081m.g Citrus clementina HOM05D008852 ORTHO05D010731 1.3e-15 86.3 90 51.1
CiPaw.12G095900 Carya illinoinensis HOM05D008852 ORTHO05D010731 1.4e-14 82.8 80 50.0
Thecc.03G275000 Theobroma cacao HOM05D008852 ORTHO05D010731 1.9e-14 82.4 81 48.1
CiPaw.11G138500 Carya illinoinensis HOM05D008852 ORTHO05D010731 4.2e-14 81.3 80 50.0
Cfa012137 Carpinus fangiana HOM05D008852 ORTHO05D010731 9.4e-14 80.1 80 48.8
Haze_08906 Corylus avellana HOM05D008852 ORTHO05D010731 2.1e-13 79.0 80 48.8
Haze_08910 Corylus avellana HOM05D008852 ORTHO05D010731 2.1e-13 79.0 80 48.8
QL12p017912 Quercus lobata HOM05D008852 ORTHO05D010731 4.6e-13 77.8 79 44.3
Gohir.D08G198700 Gossypium hirsutum HOM05D008852 ORTHO05D010731 3.9e-12 74.7 87 46.0
Gohir.A08G179900 Gossypium hirsutum HOM05D008852 ORTHO05D010731 5.1e-12 74.3 87 46.0
Gorai.004G209500 Gossypium raimondii HOM05D008852 ORTHO05D010731 5.1e-12 74.3 87 46.0
Gohir.D03G152700 Gossypium hirsutum HOM05D008852 ORTHO05D010731 8.8e-12 73.6 86 46.5
Gorai.003G160300 Gossypium raimondii HOM05D008852 ORTHO05D010731 8.8e-12 73.6 86 46.5
Phvul.002G287300 Phaseolus vulgaris HOM05D008852 ORTHO05D010731 1.1e-11 73.2 82 47.6
COL.COLO4_34424 Corchorus olitorius HOM05D008852 ORTHO05D010731 1.5e-11 72.8 88 42.0
Glyma.05G205400 Glycine max HOM05D008852 ORTHO05D010731 2.0e-11 72.4 82 46.3
Gohir.A03G015400 Gossypium hirsutum HOM05D008852 ORTHO05D010731 4.3e-11 71.2 86 45.3
Potri.002G228000 Populus trichocarpa HOM05D008852 ORTHO05D010731 7.4e-11 70.5 81 38.3
Prupe.5G095200 Prunus persica HOM05D008852 ORTHO05D010731 2.8e-10 68.6 81 40.7
Hma1.2p1_0514F.1_g169790 Hydrangea macrophylla HOM05D008852 ORTHO05D010731 4.8e-10 67.8 76 43.4
Hma1.2p1_3255F.1_g334555 Hydrangea macrophylla HOM05D008852 ORTHO05D010731 4.8e-10 67.8 76 43.4
Medtr8g096970 Medicago truncatula HOM05D008852 ORTHO05D010731 1.1e-09 66.6 84 45.2
Thecc.03G175100 Theobroma cacao HOM05D015019 ORTHO05D013840 1.4e-09 66.2 82 41.5
Manes.14G026900 Manihot esculenta HOM05D015019 ORTHO05D013840 4.1e-09 64.7 77 46.8
Glyma.08G012300 Glycine max HOM05D008852 ORTHO05D010731 6.9e-09 63.9 82 41.5
DCAR_008411 Daucus carota HOM05D008852 ORTHO05D010731 9.1e-09 63.5 80 36.2
Eucgr.D01882 Eucalyptus grandis HOM05D008852 ORTHO05D010731 2.0e-08 62.4 85 43.5
Gorai.007G023000 Gossypium raimondii HOM05D021552 ORTHO05D010731 4.5e-08 61.2 89 46.1
Lalb_Chr05g0224961 Lupinus albus HOM05D008852 ORTHO05D010731 5.9e-08 60.8 82 40.2
PGSC0003DMG400003065 Solanum tuberosum HOM05D008852 ORTHO05D010731 5.9e-08 60.8 88 42.0
Gohir.D11G021600 Gossypium hirsutum HOM05D021552 ORTHO05D010731 1.0e-07 60.1 89 44.9
Nn1g01419 Nelumbo nucifera HOM05D008852 ORTHO05D010731 1.0e-07 60.1 81 42.0
Ah.12g057350 Amaranthus hybridus HOM05D008852 ORTHO05D010731 5.0e-07 57.8 82 41.5
Cc08_g14310 Coffea canephora HOM05D008852 ORTHO05D010731 8.5e-07 57.0 84 38.1
Gohir.A09G180600 Gossypium hirsutum HOM05D015019 ORTHO05D013840 1.9e-06 55.8 85 40.0
Gohir.D09G175500 Gossypium hirsutum HOM05D015019 ORTHO05D013840 1.9e-06 55.8 85 40.0
Gorai.006G197600 Gossypium raimondii HOM05D015019 ORTHO05D013840 1.9e-06 55.8 85 40.0
Manes.06G146200 Manihot esculenta HOM05D015019 ORTHO05D013840 1.9e-06 55.8 82 39.0
CiPaw.04G065300 Carya illinoinensis HOM05D012645 ORTHO05D011500 3.2e-06 55.1 79 45.6
Lj4g0016563 Lotus japonicus HOM05D008852 ORTHO05D010731 3.2e-06 55.1 84 39.3
COL.COLO4_14294 Corchorus olitorius HOM05D015019 ORTHO05D013840 5.5e-06 54.3 73 41.1


User provided reference genes

Program Settings