Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G019900 Manihot esculenta HOM05D008679 ORTHO05D010804 2.8e-300 1034.6 584 100.0
Potri.001G103200 Populus trichocarpa HOM05D008679 ORTHO05D010804 2.0e-120 437.2 594 48.8
Potri.003G128400 Populus trichocarpa HOM05D008679 ORTHO05D010804 4.8e-114 416.0 592 50.5
Sabra01G0077900 Salix brachista HOM05D008679 ORTHO05D010804 1.5e-107 394.4 607 47.8
QL12p032781 Quercus lobata HOM05D008679 ORTHO05D010804 3.2e-78 297.0 595 41.7
Ciclev10019505m.g Citrus clementina HOM05D008679 ORTHO05D010804 1.3e-74 285.0 618 35.8
Cfa012221 Carpinus fangiana HOM05D008679 ORTHO05D010804 1.1e-70 271.9 598 40.6
TWI15G0527 Tripterygium wilfordii HOM05D008679 ORTHO05D010804 1.2e-69 268.5 589 38.0
Duzib205G1921 Durio zibethinus HOM05D008679 ORTHO05D010804 6.1e-69 266.2 576 42.9
Thecc.03G280000 Theobroma cacao HOM05D008679 ORTHO05D010804 9.1e-57 225.7 594 39.1
Cpa.g.sc74.7 Carica papaya HOM05D008679 ORTHO05D010804 1.6e-56 224.9 560 34.5
Dinv38933 Davidia involucrata HOM05D008679 ORTHO05D010804 1.5e-54 218.4 567 31.7
CiPaw.11G134300 Carya illinoinensis HOM05D008679 ORTHO05D010804 3.0e-52 210.7 475 35.8
Duzib084G0348 Durio zibethinus HOM05D008679 ORTHO05D010804 1.2e-51 208.8 583 39.8
Prupe.5G101200 Prunus persica HOM05D008679 ORTHO05D010804 4.4e-51 206.8 618 36.9
RcHm_v2.0_Chr7g0197481 Rosa chinensis HOM05D008679 ORTHO05D010804 5.7e-51 206.5 578 35.1
Actinidia14568 Actinidia chinensis HOM05D008679 ORTHO05D010804 1.2e-45 188.7 568 28.7
FAN13G2706 Fragaria x ananassa HOM05D005554 ORTHO05D007823 4.0e-44 183.7 579 35.1
FAN08G1707 Fragaria x ananassa HOM05D008679 ORTHO05D010804 5.2e-44 183.3 594 35.0
FAN04G2302 Fragaria x ananassa HOM05D008679 ORTHO05D010804 1.2e-43 182.2 583 35.8
Gorai.008G247400 Gossypium raimondii HOM05D008679 ORTHO05D010804 5.8e-43 179.9 599 28.7
FvH4_5g02611 Fragaria vesca HOM05D008679 ORTHO05D010804 1.7e-42 178.3 579 34.4
Gohir.D12G231200 Gossypium hirsutum HOM05D008679 ORTHO05D010804 3.7e-42 177.2 595 29.4
FAN18G1823 Fragaria x ananassa HOM05D008679 ORTHO05D010804 3.2e-41 174.1 579 34.4
Dinv37632 Davidia involucrata HOM05D008679 ORTHO05D010804 1.2e-40 172.2 319 37.0
Actinidia01999 Actinidia chinensis HOM05D008679 ORTHO05D010804 2.3e-39 167.9 568 27.8
Sabra03G0091300 Salix brachista HOM05D008679 ORTHO05D010804 2.3e-36 157.9 213 47.4
Lj2P184T43 Lonicera japonica HOM05D008679 ORTHO05D010804 5.2e-36 156.8 570 27.4
Gohir.A12G230100 Gossypium hirsutum HOM05D008679 ORTHO05D010804 1.2e-35 155.6 575 29.4
Hma1.2p1_0896F.1_g234080 Hydrangea macrophylla HOM05D008679 ORTHO05D010804 1.4e-33 148.7 575 26.1
TAR374G0287 Trochodendron aralioides HOM05D008679 ORTHO05D010804 6.0e-32 143.3 581 26.2
Rhsim02G0231800 Rhododendron simsii HOM05D008679 ORTHO05D010804 7.8e-32 142.9 571 27.0
TAR375G0988 Trochodendron aralioides HOM05D008679 ORTHO05D010804 2.5e-30 137.9 580 25.9
vmacro11364 Vaccinium macrocarpon HOM05D005554 ORTHO05D007823 2.3e-28 131.3 574 26.1
COL.COLO4_34476 Corchorus olitorius HOM05D008679 ORTHO05D010804 4.6e-24 117.1 609 31.7
MD06G1085200 Malus domestica HOM05D008679 ORTHO05D010804 8.6e-23 112.8 559 27.0
Haze_08788 Corylus avellana HOM05D005554 ORTHO05D007823 1.5e-19 102.1 467 33.6
Lj2C0T7 Lonicera japonica HOM05D008679 ORTHO05D010804 5.6e-14 83.6 169 34.9
Oeu007747.1 Olea europaea HOM05D008679 ORTHO05D010804 3.5e-08 64.3 169 33.7
Nn1g01544 Nelumbo nucifera HOM05D008679 ORTHO05D010804 1.5e-06 58.9 159 32.1
PGR031G2708 Punica granatum HOM05D008679 ORTHO05D010804 1.5e-06 58.9 186 31.2
MSTRG.11979 Avicennia marina HOM05D008679 ORTHO05D010804 7.4e-06 56.6 179 32.4


User provided reference genes

Program Settings