Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 2.0e-186 655.6 329 100.0
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 1.0e-142 510.4 324 76.5
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 5.2e-142 508.1 319 80.3
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 9.8e-141 503.8 323 75.2
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 9.8e-141 503.8 324 78.7
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 4.9e-140 501.5 324 77.5
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 1.6e-138 496.5 323 75.9
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 2.0e-138 496.1 323 75.9
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 1.7e-137 493.0 359 70.2
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 8.6e-137 490.7 325 74.5
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 1.9e-136 489.6 324 75.0
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 1.6e-135 486.5 327 73.7
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 1.1e-134 483.8 322 73.9
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 2.3e-134 482.6 318 73.6
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 2.3e-134 482.6 318 73.3
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 4.0e-134 481.9 318 73.6
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 5.2e-134 481.5 318 73.9
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 6.8e-134 481.1 323 72.8
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.2e-133 480.3 319 74.0
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.2e-133 480.3 319 73.7
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 1.2e-133 480.3 318 73.9
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 5.8e-133 478.0 318 73.0
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 4.9e-132 474.9 324 70.7
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 1.1e-131 473.8 327 72.2
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 1.1e-131 473.8 327 72.2
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 1.1e-131 473.8 327 72.2
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 1.4e-131 473.4 314 72.3
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 1.4e-131 473.4 313 72.5
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 2.4e-131 472.6 313 74.1
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 2.4e-131 472.6 326 71.5
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 3.2e-131 472.2 319 72.1
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 9.2e-131 470.7 324 72.5
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 1.2e-130 470.3 319 72.1
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 1.6e-130 469.9 325 69.2
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 2.0e-130 469.5 318 71.1
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 2.7e-130 469.2 319 71.8
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 2.7e-130 469.2 314 72.9
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 4.6e-130 468.4 315 73.7
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 4.6e-130 468.4 314 72.6
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 6.0e-130 468.0 326 70.9
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.0e-129 467.2 314 72.0
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 2.3e-129 466.1 319 71.5
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.3e-129 466.1 319 72.7
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 3.0e-129 465.7 322 72.0
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 1.5e-128 463.4 326 69.3
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 5.6e-128 461.5 326 69.0
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 1.2e-127 460.3 326 68.7
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 1.6e-127 459.9 318 70.1
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 2.1e-127 459.5 319 69.6
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 2.1e-127 459.5 318 69.8
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 3.6e-127 458.8 324 70.4
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 8.1e-127 457.6 318 69.5
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 8.1e-127 457.6 319 71.8
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 3.1e-126 455.7 319 68.3
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 8.9e-126 454.1 316 69.0
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 7.5e-125 451.1 319 68.3
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 1.3e-124 450.3 324 67.9
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 2.4e-123 446.0 316 68.4
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 2.4e-123 446.0 316 68.0
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 4.1e-123 445.3 322 68.0
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 4.1e-123 445.3 324 65.4
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 5.4e-123 444.9 321 68.8
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 2.1e-122 443.0 289 75.1
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 3.5e-122 442.2 314 68.8
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 7.8e-122 441.0 318 67.6
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 1.3e-121 440.3 320 69.1
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.3e-121 439.5 319 69.3
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 5.1e-121 438.3 322 67.1
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 1.2e-119 433.7 315 69.2
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 8.9e-118 427.6 357 61.3
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 7.6e-117 424.5 375 58.1
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 6.4e-116 421.4 314 65.9
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 8.4e-116 421.0 319 62.7
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 1.4e-115 420.2 315 65.4
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 3.1e-110 402.5 321 60.4
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.2e-109 400.6 324 61.7
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 2.6e-109 399.4 317 59.9
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 1.3e-108 397.1 314 60.2
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 1.9e-104 383.3 324 60.5
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.8e-102 376.7 318 61.3
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 8.4e-100 367.9 246 73.6
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 9.0e-86 321.2 305 52.5
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 4.5e-85 318.9 317 48.9
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 1.3e-84 317.4 301 52.2
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 1.7e-84 317.0 323 51.7
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 4.1e-78 295.8 190 75.8
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 5.9e-77 292.0 303 55.1
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 1.7e-76 290.4 309 48.2
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.4e-75 287.3 307 50.8
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 8.5e-68 261.5 187 67.9
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 4.2e-59 232.6 171 68.4
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 3.1e-54 216.5 440 33.0
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 1.1e-46 191.4 138 65.2
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.4e-41 174.5 130 61.5
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.4e-41 174.5 130 61.5
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.8e-30 137.5 131 53.4
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 5.4e-30 136.0 160 46.9
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 6.1e-26 122.5 222 36.9
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.9e-22 110.9 88 59.1
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 2.5e-19 100.5 74 67.6
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 1.2e-18 98.2 88 48.9
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 6.2e-18 95.9 89 47.2
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 7.8e-13 79.0 52 78.8
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 1.9e-06 57.8 83 41.0


User provided reference genes

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