Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G011900 Manihot esculenta HOM05D005006 ORTHO05D005903 1.3e-88 329.7 163 100.0
Manes.01G045300 Manihot esculenta HOM05D005006 ORTHO05D005903 2.5e-52 209.1 175 67.4
Manes.02G012001 Manihot esculenta HOM05D005006 ORTHO05D005903 1.4e-50 203.4 163 70.6
Potri.001G093500 Populus trichocarpa HOM05D005006 ORTHO05D005903 2.6e-46 189.1 145 71.0
PGSC0003DMG400012296 Solanum tuberosum HOM05D005006 ORTHO05D005903 1.5e-44 183.3 151 66.9
Duzib084G0720 Durio zibethinus HOM05D005006 ORTHO05D005903 4.2e-44 181.8 150 68.0
Gohir.A08G085100 Gossypium hirsutum HOM05D005006 ORTHO05D005903 1.2e-43 180.3 147 66.0
Solyc08g082090.1 Solanum lycopersicum HOM05D005006 ORTHO05D005903 1.8e-42 176.4 151 65.6
Sopen08g030380 Solanum pennellii HOM05D005006 ORTHO05D005903 1.8e-42 176.4 151 65.6
Gohir.D08G132000 Gossypium hirsutum HOM05D005006 ORTHO05D005903 5.2e-42 174.9 147 64.6
Gorai.004G134900 Gossypium raimondii HOM05D005006 ORTHO05D005903 5.2e-42 174.9 147 64.6
Thecc.03G294000 Theobroma cacao HOM05D005006 ORTHO05D005903 6.8e-42 174.5 148 64.9
Ciclev10022492m.g Citrus clementina HOM05D005006 ORTHO05D005903 2.0e-41 172.9 174 59.2
FvH4_5g04150 Fragaria vesca HOM05D005006 ORTHO05D005903 4.4e-41 171.8 146 63.0
FAN18G2980 Fragaria x ananassa HOM05D005006 ORTHO05D005903 1.3e-40 170.2 146 62.3
FAN13G1208 Fragaria x ananassa HOM05D005006 ORTHO05D005903 1.7e-40 169.9 146 62.3
FAN18G0263 Fragaria x ananassa HOM05D005006 ORTHO05D005903 1.7e-40 169.9 146 62.3
Sabra01G0069400 Salix brachista HOM05D000089 ORTHO05D003403 1.7e-40 169.9 139 67.6
COL.COLO4_21708 Corchorus olitorius HOM05D005006 ORTHO05D005903 2.2e-40 169.5 159 59.7
Duzib068G0822 Durio zibethinus HOM05D005006 ORTHO05D005903 2.2e-40 169.5 148 63.5
CiPaw.11G123200 Carya illinoinensis HOM05D005006 ORTHO05D005903 4.1e-39 165.2 145 64.8
Nitab4.5_0007099g0020 Nicotiana tabacum HOM05D005006 ORTHO05D005903 5.3e-39 164.9 149 61.1
RcHm_v2.0_Chr7g0195351 Rosa chinensis HOM05D005006 ORTHO05D005903 9.1e-39 164.1 152 61.2
Dinv37546 Davidia involucrata HOM05D005006 ORTHO05D005903 1.2e-38 163.7 140 64.3
Haze_08652 Corylus avellana HOM05D005006 ORTHO05D005903 3.5e-38 162.2 143 63.6
QL02p031286 Quercus lobata HOM05D005006 ORTHO05D005903 3.5e-38 162.2 164 56.7
Haze_08651 Corylus avellana HOM05D005006 ORTHO05D005903 7.7e-38 161.0 143 62.9
TWI15G0537 Tripterygium wilfordii HOM05D005006 ORTHO05D005903 5.0e-37 158.3 146 61.6
Cfa012825 Carpinus fangiana HOM05D005006 ORTHO05D005903 5.5e-36 154.8 143 61.5
FAN04G1712 Fragaria x ananassa HOM05D005006 ORTHO05D005903 1.2e-35 153.7 139 59.0
FAN04G3134 Fragaria x ananassa HOM05D005006 ORTHO05D005903 1.2e-35 153.7 139 59.0
Cc08_g15850 Coffea canephora HOM05D005006 ORTHO05D005903 1.6e-35 153.3 157 61.1
Atru.chr9.2028 Acer truncatum HOM05D005006 ORTHO05D005903 2.7e-35 152.5 151 57.6
Atru.chr9.2036 Acer truncatum HOM05D005006 ORTHO05D005903 2.7e-35 152.5 151 57.6
PGR031G0908 Punica granatum HOM05D005006 ORTHO05D005903 2.7e-35 152.5 150 62.0
CANSAT21G0143 Cannabis sativa HOM05D005006 ORTHO05D005903 1.4e-34 150.2 180 53.9
TWI81G0332 Tripterygium wilfordii HOM05D005006 ORTHO05D005903 5.2e-34 148.3 145 59.3
ClCG01G001990 Citrullus lanatus HOM05D005006 ORTHO05D005903 6.8e-34 147.9 145 60.0
Actinidia01391 Actinidia chinensis HOM05D005006 ORTHO05D005903 7.5e-33 144.4 143 56.6
Oeu061095.1 Olea europaea HOM05D005006 ORTHO05D005903 7.5e-33 144.4 155 56.8
Cpa.g.sc775.1 Carica papaya HOM05D005006 ORTHO05D005903 1.3e-32 143.7 148 56.1
Eucgr.D01714 Eucalyptus grandis HOM05D005006 ORTHO05D005903 1.7e-32 143.3 173 52.0
MD14G1122100 Malus domestica HOM05D005006 ORTHO05D005903 3.7e-32 142.1 178 51.7
Psat0s4474g0040 Pisum sativum HOM05D005006 ORTHO05D005903 6.3e-32 141.4 152 55.3
Prupe.5G116000 Prunus persica HOM05D005006 ORTHO05D005903 6.3e-32 141.4 189 48.7
MELO3C005742.2 Cucumis melo HOM05D005006 ORTHO05D005903 1.4e-31 140.2 146 57.5
Sed0010968 Sechium edule HOM05D005006 ORTHO05D005903 1.4e-31 140.2 158 54.4
TAR629G3139 Trochodendron aralioides HOM05D005006 ORTHO05D005903 1.4e-31 140.2 145 57.9
MD06G1103200 Malus domestica HOM05D005006 ORTHO05D005903 2.4e-31 139.4 166 52.4
Sc22g0005120 Simmondsia chinensis HOM05D005006 ORTHO05D005903 3.1e-31 139.0 164 51.2
Glyma.01G224600 Glycine max HOM05D005006 ORTHO05D005903 4.1e-31 138.7 175 53.7
Glyma.11G018400 Glycine max HOM05D005006 ORTHO05D005903 7.0e-31 137.9 175 54.9
Atru.chr2.764 Acer truncatum HOM05D005006 ORTHO05D005903 1.2e-30 137.1 151 53.0
AT5G41810 Arabidopsis thaliana HOM05D005006 ORTHO05D005903 1.6e-30 136.7 171 53.2
CARHR212760 Cardamine hirsuta HOM05D005006 ORTHO05D005903 1.6e-30 136.7 168 52.4
AL7G47430 Arabidopsis lyrata HOM05D005006 ORTHO05D005903 7.7e-30 134.4 171 52.6
CsaV3_5G002120 Cucumis sativus L. HOM05D005006 ORTHO05D005903 7.7e-30 134.4 149 55.7
DCAR_027715 Daucus carota HOM05D005006 ORTHO05D005903 1.3e-29 133.7 159 56.0
SGA_v2.0_scaffold111G31421 Striga asiatica HOM05D005006 ORTHO05D005903 1.7e-29 133.3 143 53.1
BcaC08g44558 Brassica carinata HOM05D005006 ORTHO05D005903 2.9e-29 132.5 171 50.3
BraA07t29781Z Brassica rapa HOM05D005006 ORTHO05D005903 3.8e-29 132.1 175 50.9
Hma1.2p1_0359F.1_g135340 Hydrangea macrophylla HOM05D005006 ORTHO05D005903 3.8e-29 132.1 155 53.5
CSS0014692 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 5.0e-29 131.7 167 50.9
C06p20240 Brassica napus HOM05D005006 ORTHO05D005903 6.6e-29 131.3 171 49.7
BolC6t37205H Brassica oleracea HOM05D005006 ORTHO05D005903 6.6e-29 131.3 171 49.7
Sed0013874 Sechium edule HOM05D005006 ORTHO05D005903 6.6e-29 131.3 143 55.2
A07p20950 Brassica napus HOM05D005006 ORTHO05D005903 1.1e-28 130.6 175 50.3
ClCG07G014930 Citrullus lanatus HOM05D005006 ORTHO05D005903 1.5e-28 130.2 171 48.0
ClCG10G009270 Citrullus lanatus HOM05D005006 ORTHO05D005903 1.5e-28 130.2 171 48.0
Peaxi162Scf00074g01119 Petunia axillaris HOM05D005006 ORTHO05D005903 1.5e-28 130.2 142 55.6
Nn1g01823 Nelumbo nucifera HOM05D005006 ORTHO05D005903 1.9e-28 129.8 144 54.2
Rhsim07G0083400 Rhododendron simsii HOM05D005006 ORTHO05D005903 1.9e-28 129.8 170 51.2
MSTRG.13880 Avicennia marina HOM05D005006 ORTHO05D005903 5.5e-28 128.3 164 50.6
TPR.G6668 Trifolium pratense HOM05D005006 ORTHO05D005903 5.5e-28 128.3 157 54.8
LjContig00312_ERROPOS870357g0014674 Lotus japonicus HOM05D005006 ORTHO05D005903 9.5e-28 127.5 166 50.6
Sp7g00270 Schrenkiella parvula HOM05D005006 ORTHO05D005903 2.1e-27 126.3 180 49.4
Carub.0007s3356 Capsella rubella HOM05D005006 ORTHO05D005903 2.8e-27 125.9 185 47.0
MELO3C016304.2 Cucumis melo HOM05D005006 ORTHO05D005903 2.8e-27 125.9 168 48.8
HanXRQChr07g0191041 Helianthus annuus HOM05D005006 ORTHO05D005903 3.6e-27 125.6 149 52.3
Lsat_1_v5_gn_6_11781 Lactuca sativa HOM05D005006 ORTHO05D005903 3.6e-27 125.6 160 49.4
Lj4g0012980 Lotus japonicus HOM05D005006 ORTHO05D005903 8.0e-27 124.4 180 48.3
BcaB02g07876 Brassica carinata HOM05D005006 ORTHO05D005903 1.0e-26 124.0 173 49.1
Sed0017945 Sechium edule HOM05D005006 ORTHO05D005903 2.3e-26 122.9 142 52.8
THA.LOC104809339 Tarenaya hassleriana HOM05D005006 ORTHO05D005903 2.3e-26 122.9 178 45.5
Glyma.05G215700 Glycine max HOM05D005006 ORTHO05D005903 3.0e-26 122.5 161 48.4
Aqoxy5G04131 Aquilegia oxysepala HOM05D005006 ORTHO05D005903 5.2e-26 121.7 148 52.0
ECA240G3705 Erigeron canadensis HOM05D005006 ORTHO05D005903 5.2e-26 121.7 151 51.7
Medtr5g009490 Medicago truncatula HOM05D005006 ORTHO05D005903 6.8e-26 121.3 168 49.4
Glyma.08G021800 Glycine max HOM05D005006 ORTHO05D005903 1.5e-25 120.2 164 48.8
Phvul.002G296900 Phaseolus vulgaris HOM05D005006 ORTHO05D005903 2.0e-25 119.8 173 46.2
CSS0022093 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 3.4e-25 119.0 151 49.0
VMungo0251G1458 Vigna mungo HOM05D005006 ORTHO05D005903 4.4e-25 118.6 172 46.5
VMungo1215G3249 Vigna mungo HOM05D005266 ORTHO05D006416 9.8e-25 117.5 145 54.5
Lsat_1_v5_gn_6_85661 Lactuca sativa HOM05D005006 ORTHO05D005903 1.7e-24 116.7 148 51.4
Carub.0002s0046 Capsella rubella HOM05D005006 ORTHO05D005903 3.7e-24 115.5 175 45.1
Peaxi162Scf00117g00128 Petunia axillaris HOM05D005006 ORTHO05D005903 4.9e-24 115.2 134 53.7
ECA233G6185 Erigeron canadensis HOM05D005006 ORTHO05D005903 6.3e-24 114.8 162 46.3
Lalb_Chr05g0224201 Lupinus albus HOM05D005006 ORTHO05D005903 8.3e-24 114.4 165 48.5
Sp2g00420 Schrenkiella parvula HOM05D005006 ORTHO05D005903 1.4e-23 113.6 165 44.2
BraA09t37075Z Brassica rapa HOM05D005006 ORTHO05D005903 1.8e-23 113.2 163 45.4
BcaC04g22629 Brassica carinata HOM05D005006 ORTHO05D005903 4.1e-23 112.1 166 45.8
A09p14260 Brassica napus HOM05D005006 ORTHO05D005903 4.1e-23 112.1 165 45.5
C09p17190 Brassica napus HOM05D005006 ORTHO05D005903 4.1e-23 112.1 162 45.1
BolC9t54617H Brassica oleracea HOM05D005006 ORTHO05D005903 4.1e-23 112.1 162 45.1
CsaV3_4G006460 Cucumis sativus L. HOM05D005006 ORTHO05D005903 5.4e-23 111.7 173 43.4
AL2G10550 Arabidopsis lyrata HOM05D005006 ORTHO05D005903 1.6e-22 110.2 147 49.0
Rhsim02G0241500 Rhododendron simsii HOM05D005006 ORTHO05D005903 3.5e-22 109.0 163 47.9
AUR62010816 Chenopodium quinoa HOM05D005006 ORTHO05D005903 4.5e-22 108.6 191 41.4
Medtr8g099340 Medicago truncatula HOM05D005006 ORTHO05D005903 4.5e-22 108.6 170 42.4
Gohir.A12G235100 Gossypium hirsutum HOM05D005006 ORTHO05D005903 5.9e-22 108.2 122 59.0
HanXRQChr03g0085171 Helianthus annuus HOM05D005006 ORTHO05D005903 5.9e-22 108.2 147 49.0
BcaB07g31512 Brassica carinata HOM05D005006 ORTHO05D005903 7.8e-22 107.8 159 42.1
Thhalv10023644m.g Eutrema salsugineum HOM05D005006 ORTHO05D005903 1.0e-21 107.5 168 42.9
Psat7g027080 Pisum sativum HOM05D005006 ORTHO05D005903 1.0e-21 107.5 158 44.3
Aa31LG9G320 Aethionema arabicum HOM05D005006 ORTHO05D005903 1.7e-21 106.7 156 47.4
AT1G64340 Arabidopsis thaliana HOM05D005006 ORTHO05D005903 3.9e-21 105.5 141 48.2
Gohir.D03G082400 Gossypium hirsutum HOM05D005006 ORTHO05D005903 8.6e-21 104.4 128 53.9
Gohir.D12G236200 Gossypium hirsutum HOM05D005006 ORTHO05D005903 8.6e-21 104.4 120 55.8
Gorai.003G081300 Gossypium raimondii HOM05D005006 ORTHO05D005903 8.6e-21 104.4 128 53.9
Gorai.008G253000 Gossypium raimondii HOM05D005006 ORTHO05D005903 8.6e-21 104.4 120 55.8
Ca_17490_v3 Cicer arietinum L. HOM05D005006 ORTHO05D005903 1.1e-20 104.0 170 45.3
Gohir.A02G102000 Gossypium hirsutum HOM05D005006 ORTHO05D005903 2.5e-20 102.8 117 53.8
MBI07_g24340_MAGBIO Magnolia biondii HOM05D005006 ORTHO05D005903 3.3e-20 102.4 163 42.3
ClCG11G005390 Citrullus lanatus HOM05D000189 ORTHO05D006628 1.6e-19 100.1 139 47.5
MBI06_g32753_MAGBIO Magnolia biondii HOM05D005006 ORTHO05D005903 1.2e-17 94.0 144 47.2
Dinv38852 Davidia involucrata HOM05D005006 ORTHO05D005903 2.6e-17 92.8 143 42.7
PGR042G1559 Punica granatum HOM05D005006 ORTHO05D005903 2.2e-16 89.7 142 41.5
ClCG01G011510 Citrullus lanatus HOM05D005006 ORTHO05D005903 4.1e-15 85.5 93 54.8
ClCG05G010200 Citrullus lanatus HOM05D005006 ORTHO05D005903 4.1e-15 85.5 93 54.8
ClCG07G009600 Citrullus lanatus HOM05D005006 ORTHO05D005903 4.1e-15 85.5 93 54.8
Sc01g0010170 Simmondsia chinensis HOM05D005006 ORTHO05D005903 7.0e-15 84.7 159 40.3
Phvul.002G163200 Phaseolus vulgaris HOM05D005006 ORTHO05D005903 1.7e-13 80.1 84 52.4
CSS0044305 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 2.5e-12 76.3 81 58.0
Gohir.A11G024100 Gossypium hirsutum HOM05D005006 ORTHO05D005903 3.3e-12 75.9 96 52.1
ATR0589G111 Amborella trichopoda HOM05D005006 ORTHO05D005903 2.8e-11 72.8 162 37.7
CSS0044713 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 5.2e-10 68.6 141 38.3
TAR636G0983 Trochodendron aralioides HOM05D000337 ORTHO05D000297 2.0e-09 66.6 80 47.5
PSO724G0798 Papaver somniferum HOM05D005006 ORTHO05D005903 4.4e-09 65.5 165 33.9
PSO724G1125 Papaver somniferum HOM05D005006 ORTHO05D005903 4.4e-09 65.5 165 33.9
SGA_v2.0_scaffold173G39083 Striga asiatica HOM05D005006 ORTHO05D005903 9.8e-09 64.3 112 41.1
SalBow1G2562 Salvia bowleyana HOM05D005006 ORTHO05D005903 2.2e-08 63.2 113 39.8
SalBow1G1740 Salvia bowleyana HOM05D005006 ORTHO05D005903 2.9e-08 62.8 113 39.8
PSO724G0350 Papaver somniferum HOM05D005006 ORTHO05D005903 4.9e-08 62.0 176 35.8
Rhsim02G0241700 Rhododendron simsii HOM05D000089 ORTHO05D003403 4.9e-08 62.0 129 40.3
Zm00001eb382950 Zea mays HOM05D005006 ORTHO05D005903 8.3e-08 61.2 149 35.6
TPR.G3451 Trifolium pratense HOM05D006501 ORTHO05D008241 1.4e-07 60.5 79 46.8
Nn3g19068 Nelumbo nucifera HOM05D005006 ORTHO05D005903 3.2e-07 59.3 81 49.4
PSO729G0067 Papaver somniferum HOM05D005006 ORTHO05D005903 5.4e-07 58.5 111 42.3
CSS0015607 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 9.2e-07 57.8 136 33.1
EL10Ac5g12894 Beta vulgaris HOM05D005006 ORTHO05D005903 2.7e-06 56.2 116 37.9


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