Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G011000 Manihot esculenta HOM05D010372 ORTHO05D010753 1.8e-120 436.0 239 100.0
Manes.01G049631 Manihot esculenta HOM05D010372 ORTHO05D010753 6.6e-62 241.5 279 58.8
Prupe.5G117500 Prunus persica HOM05D010372 ORTHO05D010753 1.7e-25 120.6 270 42.6
Potri.003G139000 Populus trichocarpa HOM05D010372 ORTHO05D010753 1.1e-21 107.8 218 39.4
Sabra03G0100100 Salix brachista HOM05D010372 ORTHO05D010753 3.7e-20 102.8 210 37.6
Duzib068G0715 Durio zibethinus HOM05D012734 ORTHO05D010753 1.1e-19 101.3 172 37.2
Sabra01G0068800 Salix brachista HOM05D010372 ORTHO05D010753 6.9e-19 98.6 252 38.1
QL02p030892 Quercus lobata HOM05D010372 ORTHO05D010753 8.4e-17 91.7 220 35.5
Dinv38842 Davidia involucrata HOM05D010372 ORTHO05D010753 1.9e-16 90.5 181 42.0
Potri.001G092600 Populus trichocarpa HOM05D010372 ORTHO05D010753 1.9e-16 90.5 253 39.5
CiPaw.11G122600 Carya illinoinensis HOM05D010372 ORTHO05D010753 2.5e-16 90.1 222 36.0
Gohir.A12G235800 Gossypium hirsutum HOM05D012734 ORTHO05D010753 3.2e-16 89.7 161 36.0
Gohir.A08G097300 Gossypium hirsutum HOM05D012734 ORTHO05D010753 7.1e-16 88.6 177 35.6
Gohir.D12G237000 Gossypium hirsutum HOM05D012734 ORTHO05D010753 7.1e-16 88.6 161 36.0
Gorai.008G253600 Gossypium raimondii HOM05D012734 ORTHO05D010753 7.1e-16 88.6 161 36.0
COL.COLO4_10683 Corchorus olitorius HOM05D012734 ORTHO05D010753 1.2e-15 87.8 161 36.6
Gorai.004G134100 Gossypium raimondii HOM05D012734 ORTHO05D010753 1.2e-15 87.8 177 36.2
Actinidia22147 Actinidia chinensis HOM05D010372 ORTHO05D010753 2.1e-15 87.0 179 39.7
FAN13G1611 Fragaria x ananassa HOM05D010372 ORTHO05D010753 4.6e-15 85.9 187 38.5
Thecc.03G296200 Theobroma cacao HOM05D012734 ORTHO05D010753 1.8e-14 84.0 165 35.8
Cfa023587 Carpinus fangiana HOM05D029168 ORTHO05D010753 6.7e-14 82.0 183 37.7
Haze_08627 Corylus avellana HOM05D029168 ORTHO05D010753 8.7e-14 81.6 209 35.9
Gohir.D08G131200 Gossypium hirsutum HOM05D012734 ORTHO05D010753 1.1e-13 81.3 177 35.0
Cfa012797 Carpinus fangiana HOM05D029168 ORTHO05D010753 2.5e-13 80.1 183 37.7
FAN18G3321 Fragaria x ananassa HOM05D010372 ORTHO05D010753 4.3e-13 79.3 176 40.3
Cpa.g.c39858 Carica papaya HOM05D010372 ORTHO05D010753 1.3e-12 77.8 218 36.2
FAN04G2204 Fragaria x ananassa HOM05D010372 ORTHO05D010753 2.2e-12 77.0 170 39.4
FvH4_5g04430 Fragaria vesca HOM05D010372 ORTHO05D010753 3.7e-12 76.3 185 39.5
FAN08G1234 Fragaria x ananassa HOM05D010372 ORTHO05D010753 2.4e-11 73.6 181 37.6
FAN18G3168 Fragaria x ananassa HOM05D010372 ORTHO05D010753 2.4e-11 73.6 186 39.2
Haze_08625 Corylus avellana HOM05D029168 ORTHO05D010753 1.7e-09 67.4 210 32.9
Sed0020029 Sechium edule HOM05D027870 ORTHO05D010753 2.9e-09 66.6 226 36.7
Gorai.007G025900 Gossypium raimondii HOM05D012734 ORTHO05D010753 8.5e-09 65.1 165 32.7
Nn3g19041 Nelumbo nucifera HOM05D017143 ORTHO05D010753 1.1e-08 64.7 176 36.9
Nitab4.5_0002944g0140 Nicotiana tabacum HOM05D013409 ORTHO05D013278 4.2e-08 62.8 171 35.1
Cc08_g15940 Coffea canephora HOM05D013409 ORTHO05D013278 5.5e-08 62.4 187 34.2
Dinv37541 Davidia involucrata HOM05D017143 ORTHO05D010753 9.4e-08 61.6 106 44.3
Gohir.A11G024600 Gossypium hirsutum HOM05D012734 ORTHO05D010753 1.6e-07 60.8 166 33.1
CARHR212700 Cardamine hirsuta HOM05D011836 ORTHO05D013977 7.9e-07 58.5 68 50.0
Peaxi162Scf00102g01722 Petunia axillaris HOM05D013409 ORTHO05D013278 1.0e-06 58.2 158 32.9
Aa31LG9G300 Aethionema arabicum HOM05D011836 ORTHO05D013977 2.3e-06 57.0 210 28.6
Sopen08g004150 Solanum pennellii HOM05D013409 ORTHO05D013278 2.3e-06 57.0 172 33.7
PGSC0003DMG400005789 Solanum tuberosum HOM05D013409 ORTHO05D013278 3.9e-06 56.2 175 34.3
Solyc08g008290.3 Solanum lycopersicum HOM05D013409 ORTHO05D013278 5.1e-06 55.8 172 34.9
CAN.G532.109 Capsicum annuum HOM05D013409 ORTHO05D013278 8.8e-06 55.1 179 30.7


User provided reference genes

Program Settings