Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G009900 Manihot esculenta HOM05D007590 ORTHO05D007875 1.3e-55 219.5 115 100.0
Manes.02G010000 Manihot esculenta HOM05D007590 ORTHO05D007875 1.4e-41 172.9 115 83.5
Potri.001G091500 Populus trichocarpa HOM05D007590 ORTHO05D007875 1.1e-25 120.2 113 63.7
Cfa012011 Carpinus fangiana HOM05D007590 ORTHO05D007875 2.9e-23 112.1 117 56.4
Sabra01G0067900 Salix brachista HOM05D007590 ORTHO05D007875 2.7e-21 105.5 110 57.3
Sabra03G0101100 Salix brachista HOM05D007590 ORTHO05D007875 2.7e-21 105.5 113 57.5
Manes.01G049200 Manihot esculenta HOM05D007590 ORTHO05D007875 3.5e-21 105.1 109 62.4
Potri.003G140100 Populus trichocarpa HOM05D007590 ORTHO05D007875 1.0e-20 103.6 113 55.8
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 1.6e-18 96.3 113 54.9
CiPaw.12G082900 Carya illinoinensis HOM05D007590 ORTHO05D007875 3.7e-18 95.1 115 56.5
Prupe.5G120200 Prunus persica HOM05D007590 ORTHO05D007875 3.7e-18 95.1 113 50.4
Hma1.2p1_1746F.1_g300410 Hydrangea macrophylla HOM05D007590 ORTHO05D007875 4.8e-18 94.7 114 53.5
Rhsim02G0243500 Rhododendron simsii HOM05D007590 ORTHO05D007875 3.1e-17 92.0 114 54.4
CiPaw.11G121300 Carya illinoinensis HOM05D007590 ORTHO05D007875 2.6e-16 89.0 113 54.9
QL02p030422 Quercus lobata HOM05D007590 ORTHO05D007875 5.9e-16 87.8 116 50.0
PGSC0003DMG400005790 Solanum tuberosum HOM05D007590 ORTHO05D007875 2.9e-15 85.5 115 46.1
Peaxi162Scf00102g00178 Petunia axillaris HOM05D007590 ORTHO05D007875 3.8e-15 85.1 108 49.1
TAR375G1006 Trochodendron aralioides HOM05D007590 ORTHO05D007875 3.8e-15 85.1 112 50.0
TAR629G1835 Trochodendron aralioides HOM05D007590 ORTHO05D007875 3.8e-15 85.1 112 50.0
Nn1g01873 Nelumbo nucifera HOM05D007590 ORTHO05D007875 5.0e-15 84.7 113 49.6
Duzib068G0682 Durio zibethinus HOM05D007590 ORTHO05D007875 6.5e-15 84.3 116 51.7
Actinidia22161 Actinidia chinensis HOM05D007590 ORTHO05D007875 8.5e-15 84.0 107 43.9
Cpa.g.sc79.34 Carica papaya HOM05D007590 ORTHO05D007875 8.5e-15 84.0 118 45.8
Lalb_Chr05g0211541 Lupinus albus HOM05D007590 ORTHO05D007875 8.5e-15 84.0 112 47.3
Duzib068G0902 Durio zibethinus HOM05D007590 ORTHO05D007875 1.4e-14 83.2 107 54.2
TAR629G2201 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.4e-14 83.2 72 63.9
DCAR_006487 Daucus carota HOM05D007590 ORTHO05D007875 1.9e-14 82.8 116 47.4
Duzib084G0874 Durio zibethinus HOM05D007590 ORTHO05D007875 1.9e-14 82.8 117 48.7
Thecc.03G298200 Theobroma cacao HOM05D007590 ORTHO05D007875 1.9e-14 82.8 116 50.0
CDE10G0175 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 2.5e-14 82.4 107 45.8
Peaxi162Scf00074g00097 Petunia axillaris HOM05D007590 ORTHO05D007875 3.2e-14 82.0 88 60.2
TAR636G1032 Trochodendron aralioides HOM05D007590 ORTHO05D007875 4.2e-14 81.6 112 50.9
Sopen08g004200 Solanum pennellii HOM05D007590 ORTHO05D007875 5.5e-14 81.3 115 44.3
LjContig00312_ERROPOS870357g0000452 Lotus japonicus HOM05D007590 ORTHO05D007875 7.2e-14 80.9 113 47.8
PGSC0003DMG400012280 Solanum tuberosum HOM05D007590 ORTHO05D007875 7.2e-14 80.9 112 48.2
Ciclev10022592m.g Citrus clementina HOM05D007590 ORTHO05D007875 9.4e-14 80.5 110 50.0
TAR374G1746 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.2e-13 80.1 113 50.4
MSTRG.25673 Avicennia marina HOM05D007590 ORTHO05D007875 2.1e-13 79.3 108 50.9
CSS0045762 Camellia sinensis var. sinensis HOM05D007590 ORTHO05D007875 2.1e-13 79.3 115 48.7
MSTRG.11924 Avicennia marina HOM05D007590 ORTHO05D007875 2.7e-13 79.0 107 50.5
CDE10G0927 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 2.7e-13 79.0 107 43.9
Medtr5g009260 Medicago truncatula HOM05D007590 ORTHO05D007875 3.6e-13 78.6 116 44.0
Nitab4.5_0002782g0040 Nicotiana tabacum HOM05D007590 ORTHO05D007875 3.6e-13 78.6 116 49.1
Cc08_g16080 Coffea canephora HOM05D007590 ORTHO05D007875 4.6e-13 78.2 108 49.1
COL.COLO4_10703 Corchorus olitorius HOM05D007590 ORTHO05D007875 7.9e-13 77.4 78 60.3
Duzib205G1174 Durio zibethinus HOM05D007590 ORTHO05D007875 7.9e-13 77.4 115 46.1
SalBow1G4032 Salvia bowleyana HOM05D007590 ORTHO05D007875 7.9e-13 77.4 73 54.8
SalBow1G6340 Salvia bowleyana HOM05D007590 ORTHO05D007875 7.9e-13 77.4 73 54.8
Sopen08g030630 Solanum pennellii HOM05D007590 ORTHO05D007875 1.0e-12 77.0 111 46.8
Aqoxy5G04230 Aquilegia oxysepala HOM05D007590 ORTHO05D007875 1.4e-12 76.6 115 44.3
FAN13G0413 Fragaria x ananassa HOM05D007590 ORTHO05D007875 1.4e-12 76.6 115 48.7
Lsat_1_v5_gn_6_83961 Lactuca sativa HOM05D007590 ORTHO05D007875 1.4e-12 76.6 108 47.2
CiPaw.12G082700 Carya illinoinensis HOM05D007590 ORTHO05D007875 1.8e-12 76.3 115 47.8
Nn3g19015 Nelumbo nucifera HOM05D007590 ORTHO05D007875 1.8e-12 76.3 113 47.8
RcHm_v2.0_Chr7g0194781 Rosa chinensis HOM05D007590 ORTHO05D007875 1.8e-12 76.3 115 46.1
Solyc08g082370.1 Solanum lycopersicum HOM05D007590 ORTHO05D007875 1.8e-12 76.3 111 45.9
Phvul.002G164500 Phaseolus vulgaris HOM05D007590 ORTHO05D007875 2.3e-12 75.9 114 41.2
Glyma.01G225600 Glycine max HOM05D007590 ORTHO05D007875 3.0e-12 75.5 116 44.8
Lsat_1_v5_gn_3_10720 Lactuca sativa HOM05D007590 ORTHO05D007875 3.0e-12 75.5 108 44.4
FAN04G0970 Fragaria x ananassa HOM05D007590 ORTHO05D007875 5.1e-12 74.7 115 47.8
Nitab4.5_0001231g0140 Nicotiana tabacum HOM05D007590 ORTHO05D007875 5.1e-12 74.7 103 49.5
Sed0026863 Sechium edule HOM05D007590 ORTHO05D007875 5.1e-12 74.7 121 41.3
HanXRQChr03g0083501 Helianthus annuus HOM05D007590 ORTHO05D007875 8.8e-12 73.9 108 42.6
FAN08G0943 Fragaria x ananassa HOM05D007590 ORTHO05D007875 1.1e-11 73.6 115 46.1
AUR62019841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 2.0e-11 72.8 117 41.9
TWI60G0225 Tripterygium wilfordii HOM05D007590 ORTHO05D007875 2.0e-11 72.8 116 44.0
EL10Ac5g12916 Beta vulgaris HOM05D007590 ORTHO05D007875 4.3e-11 71.6 82 53.7
TPR.G25602 Trifolium pratense HOM05D007590 ORTHO05D007875 5.7e-11 71.2 116 43.1
Ca_24513_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 1.3e-10 70.1 72 52.8
Ca_29733_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 1.3e-10 70.1 72 52.8
CANSAT21G0370 Cannabis sativa HOM05D007590 ORTHO05D007875 2.2e-10 69.3 127 44.9
SGA_v2.0_scaffold305G47972 Striga asiatica HOM05D007590 ORTHO05D007875 2.2e-10 69.3 108 44.4
Glyma.11G017400 Glycine max HOM05D007590 ORTHO05D007875 2.8e-10 68.9 74 56.8
CsaV3_4G006590 Cucumis sativus L. HOM05D007590 ORTHO05D007875 4.8e-10 68.2 115 41.7
Oeu063521.1 Olea europaea HOM05D007590 ORTHO05D007875 8.2e-10 67.4 107 44.9
Gohir.D03G083700 Gossypium hirsutum HOM05D007590 ORTHO05D007875 1.1e-09 67.0 115 43.5
Aa31LG2G1420 Aethionema arabicum HOM05D010600 ORTHO05D007875 1.4e-09 66.6 125 36.8
Gohir.D12G237700 Gossypium hirsutum HOM05D007590 ORTHO05D007875 1.8e-09 66.2 113 42.5
Gohir.D12G237966 Gossypium hirsutum HOM05D007590 ORTHO05D007875 1.8e-09 66.2 113 42.5
AUR62010841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 2.4e-09 65.9 117 39.3
Sed0003477 Sechium edule HOM05D007590 ORTHO05D007875 3.1e-09 65.5 62 53.2
MELO3C016294.2 Cucumis melo HOM05D007590 ORTHO05D007875 4.1e-09 65.1 71 53.5
Gohir.A12G236500 Gossypium hirsutum HOM05D007590 ORTHO05D007875 9.1e-09 63.9 110 41.8
Gorai.008G254500 Gossypium raimondii HOM05D007590 ORTHO05D007875 9.1e-09 63.9 113 41.6
Migut.A00642 Erythranthe guttata HOM05D007590 ORTHO05D007875 1.2e-08 63.5 60 55.0
Gohir.A02G100100 Gossypium hirsutum HOM05D007590 ORTHO05D007875 2.6e-08 62.4 113 43.4
ClCG07G011620 Citrullus lanatus HOM05D007590 ORTHO05D007875 3.4e-08 62.0 64 53.1
Gorai.003G079000 Gossypium raimondii HOM05D007590 ORTHO05D007875 3.4e-08 62.0 107 43.0
Ah.12g052560 Amaranthus hybridus HOM05D007590 ORTHO05D007875 5.9e-08 61.2 122 40.2
ATR0602G105 Amborella trichopoda HOM05D007590 ORTHO05D007875 5.9e-08 61.2 128 37.5
Eucgr.D01739 Eucalyptus grandis HOM05D007590 ORTHO05D007875 7.7e-08 60.8 138 39.9
MBI06_g08455_MAGBIO Magnolia biondii HOM05D007590 ORTHO05D007875 1.7e-07 59.7 63 50.8
Thhalv10023875m.g Eutrema salsugineum HOM05D010600 ORTHO05D007875 2.2e-07 59.3 126 40.5
Carub.0002s0036 Capsella rubella HOM05D010600 ORTHO05D007875 5.0e-07 58.2 123 35.0
Haze_09063 Corylus avellana HOM05D007590 ORTHO05D007875 8.5e-07 57.4 78 51.3
Gohir.A02G100200 Gossypium hirsutum HOM05D007590 ORTHO05D007875 1.4e-06 56.6 106 39.6
Zm00001eb204270 Zea mays HOM05D021977 ORTHO05D007875 1.4e-06 56.6 58 56.9
Zm00001eb383160 Zea mays HOM05D021977 ORTHO05D007875 2.5e-06 55.8 126 36.5
Sp2g00320 Schrenkiella parvula HOM05D010600 ORTHO05D007875 3.2e-06 55.5 124 35.5
A09p14360 Brassica napus HOM05D010600 ORTHO05D007875 4.2e-06 55.1 121 38.0
BraA09t37083Z Brassica rapa HOM05D010600 ORTHO05D007875 4.2e-06 55.1 121 38.0
BolC9t54630H Brassica oleracea HOM05D010600 ORTHO05D007875 7.2e-06 54.3 121 37.2
BcaC04g22619 Brassica carinata HOM05D010600 ORTHO05D007875 9.4e-06 53.9 121 37.2


User provided reference genes

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