Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G003600 Manihot esculenta HOM05D006904 ORTHO05D008439 1.6e-128 463.0 267 100.0
Potri.001G084500 Populus trichocarpa HOM05D006904 ORTHO05D008439 8.4e-66 254.6 256 61.3
Thecc.03G222200 Theobroma cacao HOM05D006904 ORTHO05D008439 5.3e-60 235.3 268 56.0
CSS0028351 Camellia sinensis var. sinensis HOM05D006904 ORTHO05D008439 9.3e-57 224.6 265 59.2
Sabra01G0061300 Salix brachista HOM05D006904 ORTHO05D008439 9.3e-57 224.6 310 49.7
COL.COLO4_10787 Corchorus olitorius HOM05D006904 ORTHO05D008439 8.7e-55 218.0 255 53.3
Gohir.D12G240700 Gossypium hirsutum HOM05D006904 ORTHO05D008439 1.5e-54 217.2 218 58.7
Gorai.008G257800 Gossypium raimondii HOM05D006904 ORTHO05D008439 1.5e-54 217.2 218 58.7
Gohir.A12G239500 Gossypium hirsutum HOM05D006904 ORTHO05D008439 1.9e-54 216.9 218 58.7
TWI81G0826 Tripterygium wilfordii HOM05D006904 ORTHO05D008439 1.9e-54 216.9 277 51.3
Ciclev10021179m.g Citrus clementina HOM05D006904 ORTHO05D008439 1.6e-53 213.8 236 53.4
GSVIVG01019640001 Vitis vinifera HOM05D006904 ORTHO05D008439 8.2e-53 211.5 254 56.7
TAR629G0561 Trochodendron aralioides HOM05D006904 ORTHO05D008439 1.4e-52 210.7 273 54.6
Nitab4.5_0004251g0070 Nicotiana tabacum HOM05D006904 ORTHO05D008439 3.1e-52 209.5 224 56.2
Cfa011933 Carpinus fangiana HOM05D006904 ORTHO05D008439 1.2e-51 207.6 265 48.7
Dinv02287 Davidia involucrata HOM05D006904 ORTHO05D008439 1.2e-51 207.6 265 56.2
QL02p029228 Quercus lobata HOM05D006904 ORTHO05D008439 1.5e-51 207.2 230 59.6
CAN.G567.78 Capsicum annuum HOM05D006904 ORTHO05D008439 2.0e-51 206.8 203 58.6
Prupe.5G128700 Prunus persica HOM05D006904 ORTHO05D008439 3.4e-51 206.1 243 60.1
Cc08_g16680 Coffea canephora HOM05D006904 ORTHO05D008439 1.0e-50 204.5 251 55.0
Hma1.2p1_0456F.1_g156570 Hydrangea macrophylla HOM05D006904 ORTHO05D008439 1.3e-50 204.1 184 69.6
MSTRG.24864 Avicennia marina HOM05D006904 ORTHO05D008439 3.8e-50 202.6 237 53.6
Haze_09157 Corylus avellana HOM05D006904 ORTHO05D008439 3.8e-50 202.6 266 48.1
Aqoxy5G04256 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 6.5e-50 201.8 223 53.8
PGSC0003DMG400012243 Solanum tuberosum HOM05D006904 ORTHO05D008439 1.4e-49 200.7 192 59.9
ClCG10G000840 Citrullus lanatus HOM05D006904 ORTHO05D008439 2.5e-49 199.9 220 59.5
Eucgr.E01035 Eucalyptus grandis HOM05D006904 ORTHO05D008439 2.5e-49 199.9 224 58.5
Sopen08g031220 Solanum pennellii HOM05D006904 ORTHO05D008439 9.3e-49 198.0 237 53.2
Haze_09163 Corylus avellana HOM05D006904 ORTHO05D008439 1.2e-48 197.6 268 47.8
FAN04G1837 Fragaria x ananassa HOM05D006904 ORTHO05D008439 2.1e-48 196.8 248 52.4
Solyc08g083010.3 Solanum lycopersicum HOM05D006904 ORTHO05D008439 2.1e-48 196.8 203 56.7
THA.LOC104813055 Tarenaya hassleriana HOM05D006904 ORTHO05D008439 2.1e-48 196.8 254 48.8
MD06G1117600 Malus domestica HOM05D006904 ORTHO05D008439 6.1e-48 195.3 240 51.7
SGA_v2.0_scaffold104G30265 Striga asiatica HOM05D006904 ORTHO05D008439 6.1e-48 195.3 249 51.8
RcHm_v2.0_Chr7g0186801 Rosa chinensis HOM05D006904 ORTHO05D008439 1.0e-47 194.5 228 53.1
vmacro11509 Vaccinium macrocarpon HOM05D006904 ORTHO05D008439 1.3e-47 194.1 259 48.3
MD14G1125000 Malus domestica HOM05D006904 ORTHO05D008439 1.8e-47 193.7 241 51.5
Oeu010740.1 Olea europaea HOM05D006904 ORTHO05D008439 3.9e-47 192.6 182 59.3
Ca_13963_v3 Cicer arietinum L. HOM05D006904 ORTHO05D008439 5.1e-47 192.2 204 52.9
CiPaw.12G078200 Carya illinoinensis HOM05D006904 ORTHO05D008439 6.7e-47 191.8 258 55.8
Haze_16434 Corylus avellana HOM05D006904 ORTHO05D008439 3.3e-46 189.5 251 47.8
Duzib205G0314 Durio zibethinus HOM05D006904 ORTHO05D008439 4.3e-46 189.1 245 52.2
FvH4_5g11010 Fragaria vesca HOM05D006904 ORTHO05D008439 4.3e-46 189.1 230 54.3
FAN18G2239 Fragaria x ananassa HOM05D006904 ORTHO05D008439 4.3e-46 189.1 230 54.3
Medtr3g005290 Medicago truncatula HOM05D006904 ORTHO05D008439 1.3e-45 187.6 215 51.6
Peaxi162Scf00074g00356 Petunia axillaris HOM05D006904 ORTHO05D008439 1.6e-45 187.2 223 50.7
MBI04_g44912_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 2.2e-45 186.8 252 47.2
Hund11354 Selenicereus undatus HOM05D006904 ORTHO05D008439 2.8e-45 186.4 234 50.4
Lj2g0027548 Lotus japonicus HOM05D006904 ORTHO05D008439 3.7e-45 186.0 227 52.0
Migut.A01096 Erythranthe guttata HOM05D006904 ORTHO05D008439 4.8e-45 185.7 227 48.9
Lsat_1_v5_gn_6_9180 Lactuca sativa HOM05D000482 ORTHO05D000349 6.3e-45 185.3 275 45.1
Nitab4.5_0007063g0060 Nicotiana tabacum HOM05D006904 ORTHO05D008439 6.3e-45 185.3 230 51.3
FAN13G1638 Fragaria x ananassa HOM05D006904 ORTHO05D008439 8.2e-45 184.9 230 53.0
HanXRQChr07g0192161 Helianthus annuus HOM05D006904 ORTHO05D008439 8.2e-45 184.9 263 46.8
Rhsim02G0251400 Rhododendron simsii HOM05D006904 ORTHO05D008439 8.2e-45 184.9 203 54.7
Glyma.09G286200 Glycine max HOM05D006904 ORTHO05D008439 1.1e-44 184.5 228 49.1
Thhalv10025762m.g Eutrema salsugineum HOM05D006904 ORTHO05D008439 1.4e-44 184.1 221 52.0
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 2.4e-44 183.3 219 52.1
Sed0025618 Sechium edule HOM05D006904 ORTHO05D008439 5.3e-44 182.2 225 51.1
Actinidia04169 Actinidia chinensis HOM05D006904 ORTHO05D008439 6.9e-44 181.8 223 48.4
BcaC09g50912 Brassica carinata HOM05D006904 ORTHO05D008439 6.9e-44 181.8 219 52.1
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 6.9e-44 181.8 219 52.1
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 6.9e-44 181.8 219 52.1
Lj8A201G80 Lonicera japonica HOM05D006904 ORTHO05D008439 9.0e-44 181.4 186 55.9
Phvul.002G333700 Phaseolus vulgaris HOM05D006904 ORTHO05D008439 9.0e-44 181.4 225 48.4
AT4G24090 Arabidopsis thaliana HOM05D006904 ORTHO05D008439 1.2e-43 181.0 221 53.4
BraA01t01480Z Brassica rapa HOM05D006904 ORTHO05D008439 1.2e-43 181.0 221 51.1
Sc01g0010610 Simmondsia chinensis HOM05D006904 ORTHO05D008439 1.2e-43 181.0 232 52.2
VMungo1309G0432 Vigna mungo HOM05D006904 ORTHO05D008439 1.2e-43 181.0 204 53.9
AL7G29200 Arabidopsis lyrata HOM05D006904 ORTHO05D008439 1.5e-43 180.6 262 48.9
arahy.Tifrunner.gnm1.ann1.U3Q9D7 Arachis hypogaea HOM05D006904 ORTHO05D008439 1.5e-43 180.6 216 52.3
Carub.0007s1701 Capsella rubella HOM05D006904 ORTHO05D008439 3.4e-43 179.5 266 48.5
ECA233G3570 Erigeron canadensis HOM05D006904 ORTHO05D008439 3.4e-43 179.5 190 54.2
BcaNung01113 Brassica carinata HOM05D006904 ORTHO05D008439 1.3e-42 177.6 221 52.0
PSO675G2501 Papaver somniferum HOM05D006904 ORTHO05D008439 1.3e-42 177.6 238 45.0
Atru.chr9.1900 Acer truncatum HOM05D006904 ORTHO05D008439 1.7e-42 177.2 197 52.3
Ah.12g053150 Amaranthus hybridus HOM05D006904 ORTHO05D008439 2.9e-42 176.4 213 50.2
Psat1g000400 Pisum sativum HOM05D006904 ORTHO05D008439 6.5e-42 175.3 225 49.8
EL10Ac5g12440 Beta vulgaris HOM05D006904 ORTHO05D008439 8.5e-42 174.9 204 49.0
Aa31LG6G7300 Aethionema arabicum HOM05D006904 ORTHO05D008439 1.4e-41 174.1 253 45.1
PGR042G3610 Punica granatum HOM05D006904 ORTHO05D008439 2.5e-41 173.3 214 58.4
CDE09G0165 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 3.2e-41 172.9 199 52.8
arahy.Tifrunner.gnm1.ann1.NJ37M5 Arachis hypogaea HOM05D006904 ORTHO05D008439 4.2e-41 172.6 232 49.6
MBI04_g21743_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 7.2e-41 171.8 183 53.0
PSO541G0496 Papaver somniferum HOM05D006904 ORTHO05D008439 1.2e-40 171.0 234 47.9
MELO3C013778.2 Cucumis melo HOM05D006904 ORTHO05D008439 3.6e-40 169.5 270 49.6
CsaV3_3G000910 Cucumis sativus L. HOM05D006904 ORTHO05D008439 6.1e-40 168.7 273 49.5
CDE11G0025 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 1.0e-39 167.9 210 49.5
TPR.G25509 Trifolium pratense HOM05D006904 ORTHO05D008439 3.0e-39 166.4 198 50.0
AUR62007044 Chenopodium quinoa HOM05D006904 ORTHO05D008439 2.5e-38 163.3 216 47.2
Haze_14079 Corylus avellana HOM05D006904 ORTHO05D008439 7.4e-38 161.8 215 47.9
Sp7g22050 Schrenkiella parvula HOM05D006904 ORTHO05D008439 1.3e-37 161.0 221 48.0
DCAR_006536 Daucus carota HOM05D006904 ORTHO05D008439 9.1e-36 154.8 184 57.6
ATR0620G017 Amborella trichopoda HOM05D006904 ORTHO05D008439 5.9e-35 152.1 244 41.8
CANSAT21G0222 Cannabis sativa HOM05D006904 ORTHO05D008439 1.7e-34 150.6 250 48.8
unitig_88.g27646 Utricularia gibba HOM05D006904 ORTHO05D008439 1.0e-31 141.4 225 47.1
Cpa.g.sc175.18 Carica papaya HOM05D006904 ORTHO05D008439 2.3e-31 140.2 214 48.6
HPP92_025869 Vanilla planifolia HOM05D006904 ORTHO05D008439 6.7e-31 138.7 214 47.7
SalBow8G2695 Salvia bowleyana HOM05D006904 ORTHO05D008439 4.8e-29 132.5 223 47.1
AUR62019908 Chenopodium quinoa HOM05D006904 ORTHO05D008439 7.0e-28 128.6 221 47.5
Lsat_1_v5_gn_3_13720 Lactuca sativa HOM05D006904 ORTHO05D008439 9.1e-28 128.3 264 38.3
SEGI_29366 Sequoiadendron giganteum HOM05D006904 ORTHO05D008439 1.3e-26 124.4 214 38.3
Aqoxy5G04252 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 3.8e-26 122.9 153 51.0
Nn5g30646 Nelumbo nucifera HOM05D006904 ORTHO05D008439 8.5e-26 121.7 113 60.2
Zm00001eb319140 Zea mays HOM05D006904 ORTHO05D008439 1.1e-25 121.3 203 49.3
ECA246G4131 Erigeron canadensis HOM05D006904 ORTHO05D008439 1.0e-23 114.8 156 45.5
CARHR231490 Cardamine hirsuta HOM05D006904 ORTHO05D008439 6.7e-23 112.1 117 57.3
Os09g0529350 Oryza sativa ssp. japonica HOM05D006904 ORTHO05D008439 7.5e-22 108.6 122 48.4
Pp3c9_20020 Physcomitrium patens HOM05D006904 ORTHO05D008439 7.0e-20 102.1 194 37.1
HanXRQChr06g0166841 Helianthus annuus HOM05D006904 ORTHO05D008439 7.7e-19 98.6 99 51.5
BcaC09g50913 Brassica carinata HOM05D006904 ORTHO05D008439 9.8e-14 81.6 77 58.4
CBR_g70738 Chara braunii HOM05D006904 ORTHO05D008439 2.4e-12 77.0 79 48.1
AagrBONN_evm.TU.Sc2ySwM_228.3172 Anthoceros agrestis HOM05D006904 ORTHO05D008439 5.4e-12 75.9 238 30.7
MCO05G331 Micromonas commoda HOM05D006904 ORTHO05D008439 2.7e-11 73.6 81 49.4
Mapoly0033s0090 Marchantia polymorpha HOM05D006904 ORTHO05D008439 3.5e-11 73.2 262 28.6
SMO361G0353 Selaginella moellendorffii HOM05D006904 ORTHO05D008439 3.5e-11 73.2 77 50.6
Cre02.g144850 Chlamydomonas reinhardtii HOM05D006904 ORTHO05D008439 6.5e-10 68.9 84 46.4
QL02p029244 Quercus lobata HOM05D006904 ORTHO05D008439 2.7e-08 63.5 104 41.3


User provided reference genes

Program Settings