Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G274800 Manihot esculenta HOM05D007595 ORTHO05D009570 6.2e-190 668.7 884 100.0
Potri.014G052800 Populus trichocarpa HOM05D007595 ORTHO05D009570 3.2e-93 347.4 300 61.0
Sabra14G0039800 Salix brachista HOM05D007595 ORTHO05D009570 2.3e-91 341.3 279 63.1
Duzib138G0502 Durio zibethinus HOM05D007595 ORTHO05D009570 7.5e-87 326.2 283 60.8
Atru.chr5.81 Acer truncatum HOM05D007595 ORTHO05D009570 1.3e-86 325.5 317 54.6
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 1.3e-86 325.5 305 58.4
Cfa011030 Carpinus fangiana HOM05D007595 ORTHO05D009570 1.4e-85 322.0 257 63.0
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 7.0e-85 319.7 312 55.1
Prupe.1G180300 Prunus persica HOM05D007595 ORTHO05D009570 2.7e-84 317.8 265 61.9
SHI13644 Sapria himalayana HOM05D007595 ORTHO05D009570 6.0e-84 316.6 287 57.1
CiPaw.13G022600 Carya illinoinensis HOM05D007595 ORTHO05D009570 5.1e-83 313.5 277 57.4
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 1.1e-82 312.4 265 62.3
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 9.5e-82 309.3 256 61.3
MELO3C006272.2 Cucumis melo HOM05D007595 ORTHO05D009570 1.8e-80 305.1 304 54.3
Ciclev10018805m.g Citrus clementina HOM05D007595 ORTHO05D009570 4.0e-80 303.9 301 53.2
CsaV3_3G010510 Cucumis sativus L. HOM05D007595 ORTHO05D009570 4.0e-80 303.9 304 53.9
ClCG05G002930 Citrullus lanatus HOM05D007595 ORTHO05D009570 4.9e-78 297.0 301 53.8
Lalb_Chr16g0384971 Lupinus albus HOM05D007595 ORTHO05D009570 1.6e-76 292.0 298 53.0
Sed0013429 Sechium edule HOM05D007595 ORTHO05D009570 7.8e-76 289.7 305 52.1
CANSAT25G1659 Cannabis sativa HOM05D007595 ORTHO05D009570 1.7e-75 288.5 276 54.7
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 8.6e-75 286.2 304 52.3
VMungo0251G3282 Vigna mungo HOM05D007595 ORTHO05D009570 1.2e-73 282.3 267 53.6
Phvul.002G094300 Phaseolus vulgaris HOM05D007595 ORTHO05D009570 8.1e-73 279.6 254 56.3
Lj1g0026949 Lotus japonicus HOM05D007595 ORTHO05D009570 1.4e-72 278.9 281 53.7
CANSAT78G1456 Cannabis sativa HOM05D007595 ORTHO05D009570 1.2e-71 275.8 276 53.6
Lsat_1_v5_gn_4_38381 Lactuca sativa HOM05D007595 ORTHO05D009570 1.2e-71 275.8 302 49.3
vmacro09088 Vaccinium macrocarpon HOM05D007595 ORTHO05D009570 1.2e-71 275.8 316 51.3
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 2.6e-71 274.6 276 53.3
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 9.9e-71 272.7 255 56.5
Sc22g0000140 Simmondsia chinensis HOM05D007595 ORTHO05D009570 4.9e-70 270.4 300 48.0
Sc22g0001280 Simmondsia chinensis HOM05D007595 ORTHO05D009570 4.9e-70 270.4 300 48.0
THA.LOC104811608 Tarenaya hassleriana HOM05D007595 ORTHO05D009570 6.4e-70 270.0 247 56.3
Psat3g072800 Pisum sativum HOM05D007595 ORTHO05D009570 9.2e-69 266.2 267 53.9
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 9.2e-69 266.2 229 57.2
CANSAT54G2206 Cannabis sativa HOM05D007595 ORTHO05D009570 3.5e-68 264.2 256 52.7
Lalb_Chr05g0219501 Lupinus albus HOM05D007595 ORTHO05D009570 1.5e-66 258.8 285 51.2
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 1.4e-64 252.3 270 52.6
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 1.8e-64 251.9 270 50.7
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 2.0e-63 248.4 184 67.4
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.7e-62 245.4 184 63.0
MD02G1222500 Malus domestica HOM05D007595 ORTHO05D009570 2.9e-62 244.6 184 63.0
COL.COLO4_12359 Corchorus olitorius HOM05D007595 ORTHO05D009570 4.9e-62 243.8 184 65.2
AUR62034666 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.1e-61 242.7 184 63.0
CAN.G756.22 Capsicum annuum HOM05D007595 ORTHO05D009570 2.7e-60 238.0 253 52.6
Cc02_g25530 Coffea canephora HOM05D007595 ORTHO05D009570 2.7e-60 238.0 206 57.3
Medtr7g091470 Medicago truncatula HOM05D007595 ORTHO05D009570 2.7e-60 238.0 256 51.6
SalBow5G3719 Salvia bowleyana HOM05D007595 ORTHO05D009570 2.7e-60 238.0 263 49.8
CSS0007679 Camellia sinensis var. sinensis HOM05D007595 ORTHO05D009570 7.8e-60 236.5 184 61.4
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 2.5e-58 231.5 175 66.3
Ah.08g212430 Amaranthus hybridus HOM05D007595 ORTHO05D009570 1.6e-57 228.8 184 59.8
RcHm_v2.0_Chr4g0407101 Rosa chinensis HOM05D007595 ORTHO05D009570 4.8e-57 227.3 184 63.0
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 6.2e-57 226.9 178 61.2
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 1.1e-56 226.1 287 45.3
Nitab4.5_0000563g0010 Nicotiana tabacum HOM05D007595 ORTHO05D009570 2.4e-56 224.9 259 50.6
Migut.B01494 Erythranthe guttata HOM05D007595 ORTHO05D009570 6.9e-56 223.4 300 42.7
Lj9C550T12 Lonicera japonica HOM05D007595 ORTHO05D009570 9.9e-55 219.5 170 62.9
CDE04G2406 Ceratophyllum demersum HOM05D007595 ORTHO05D009570 3.2e-53 214.5 243 47.7
Ca_08452_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 3.2e-53 214.5 181 60.8
Ca_08455_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 3.2e-53 214.5 181 60.8
PSO675G4153 Papaver somniferum HOM05D007595 ORTHO05D009570 4.2e-53 214.2 283 44.2
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 5.4e-53 213.8 180 57.2
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 7.1e-53 213.4 290 42.4
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 1.8e-51 208.8 287 44.3
EL10Ac7g17423 Beta vulgaris HOM05D007595 ORTHO05D009570 3.0e-51 208.0 184 55.4
Oeu004640.1 Olea europaea HOM05D007595 ORTHO05D009570 5.1e-51 207.2 179 55.3
PSO732G0035 Papaver somniferum HOM05D007595 ORTHO05D009570 4.3e-50 204.1 283 44.2
Nn1g00708 Nelumbo nucifera HOM05D007595 ORTHO05D009570 5.8e-47 193.7 237 50.2
Aqoxy7G02148 Aquilegia oxysepala HOM05D007595 ORTHO05D009570 2.5e-45 188.3 237 47.3
PGR042G2115 Punica granatum HOM05D007595 ORTHO05D009570 2.1e-44 185.3 192 53.6
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 3.5e-44 184.5 172 55.8
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 2.3e-43 181.8 142 64.8
PSO732G0412 Papaver somniferum HOM05D007595 ORTHO05D009570 2.5e-42 178.3 222 44.6
Aa31LG1G28920 Aethionema arabicum HOM05D007595 ORTHO05D009570 7.4e-42 176.8 140 62.9
Glyma.20G014500 Glycine max HOM05D007595 ORTHO05D009570 2.8e-41 174.9 141 59.6
HanXRQChr14g0457401 Helianthus annuus HOM05D007595 ORTHO05D009570 2.2e-38 165.2 191 45.0
Thecc.01G401700 Theobroma cacao HOM05D007595 ORTHO05D009570 3.2e-37 161.4 117 69.2
DCAR_029507 Daucus carota HOM05D007595 ORTHO05D009570 9.3e-37 159.8 149 54.4
Gohir.D12G101900 Gossypium hirsutum HOM05D007595 ORTHO05D009570 1.5e-34 152.5 117 64.1
TAR629G2414 Trochodendron aralioides HOM05D007595 ORTHO05D009570 2.5e-34 151.8 125 60.8
Rhsim07G0038800 Rhododendron simsii HOM05D007595 ORTHO05D009570 1.1e-32 146.4 150 52.0
MD07G1093100 Malus domestica HOM05D007595 ORTHO05D009570 1.0e-30 139.8 118 59.3
FAN18G0104 Fragaria x ananassa HOM05D007595 ORTHO05D009570 2.2e-30 138.7 111 63.1
TPR.G3705 Trifolium pratense HOM05D007595 ORTHO05D009570 2.9e-30 138.3 108 63.0
ECA234G2641 Erigeron canadensis HOM05D007595 ORTHO05D009570 3.2e-29 134.8 103 64.1
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 5.5e-29 134.0 111 61.3
GSVIVG01018339001 Vitis vinifera HOM05D007595 ORTHO05D009570 2.0e-26 125.6 90 62.2
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 7.4e-26 123.6 87 67.8
HPP92_014879 Vanilla planifolia HOM05D007595 ORTHO05D009570 3.8e-22 111.3 173 39.3
Cc11_g12050 Coffea canephora HOM05D007595 ORTHO05D009570 8.8e-19 100.1 78 60.3
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 9.7e-18 96.7 75 62.7
Sabra14G0039700 Salix brachista HOM05D007595 ORTHO05D009570 2.8e-17 95.1 110 45.5
Cpa.g.sc52.75 Carica papaya HOM05D007595 ORTHO05D009570 3.7e-17 94.7 83 51.8
Solyc01g088670.3 Solanum lycopersicum HOM05D007595 ORTHO05D009570 4.8e-17 94.4 100 49.0
Migut.I00272 Erythranthe guttata HOM05D007595 ORTHO05D009570 1.7e-14 85.9 66 63.6
Zm00001eb224150 Zea mays HOM05D011046 ORTHO05D013342 5.5e-13 80.9 97 41.2
Zm00001eb367370 Zea mays HOM05D011046 ORTHO05D013342 1.8e-11 75.9 104 35.6
Zm00001eb210080 Zea mays HOM05D011046 ORTHO05D013342 4.1e-08 64.7 74 41.9
Eucgr.D01185 Eucalyptus grandis HOM05D007595 ORTHO05D009570 7.0e-08 63.9 51 58.8
Zm00001eb190020 Zea mays HOM05D011046 ORTHO05D013342 1.2e-07 63.2 56 50.0
ATR0665G577 Amborella trichopoda HOM05D007595 ORTHO05D009570 1.0e-06 60.1 110 30.0
RcHm_v2.0_Chr1g0330001 Rosa chinensis HOM05D008657 ORTHO05D010869 1.3e-06 59.7 215 27.0


User provided reference genes

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