Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 0.0e+00 1342.0 649 100.0
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 1.2e-299 1032.7 646 77.6
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 2.6e-294 1015.0 646 76.2
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 2.1e-288 995.3 646 73.8
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 5.2e-287 990.7 649 74.6
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 1.2e-286 989.6 649 74.6
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 1.5e-286 989.2 649 74.6
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 1.3e-285 986.1 602 77.2
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 1.1e-284 983.0 652 72.4
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 1.4e-284 982.6 644 73.1
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 4.1e-284 981.1 650 73.7
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 7.8e-283 976.9 662 70.8
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 1.9e-281 972.2 656 71.6
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 3.3e-281 971.5 579 77.9
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 1.6e-280 969.1 585 77.4
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 1.1e-279 966.5 658 72.3
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 1.4e-279 966.1 585 77.1
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 5.8e-278 960.7 616 74.5
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 8.3e-277 956.8 655 71.9
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 1.2e-275 953.0 575 76.0
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 4.6e-275 951.0 652 71.3
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 7.8e-275 950.3 665 71.6
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 7.8e-275 950.3 650 71.7
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 3.9e-274 948.0 636 71.1
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 9.6e-273 943.3 640 70.8
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 2.8e-272 941.8 605 73.7
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 8.1e-272 940.3 582 75.3
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 8.1e-272 940.3 652 70.4
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 5.2e-271 937.6 587 75.6
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 6.8e-271 937.2 647 70.9
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 6.8e-271 937.2 659 69.7
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 6.8e-271 937.2 577 75.4
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 6.8e-271 937.2 578 76.1
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 3.4e-270 934.9 577 75.0
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 5.8e-270 934.1 577 75.0
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 5.8e-270 934.1 579 75.0
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 7.6e-270 933.7 618 71.2
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 7.6e-270 933.7 577 75.0
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 8.4e-269 930.2 607 71.8
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 5.4e-268 927.5 649 69.8
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 1.6e-267 926.0 583 73.9
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 2.1e-267 925.6 583 73.9
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 2.7e-267 925.2 579 74.1
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 2.7e-267 925.2 736 63.3
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 1.0e-266 923.3 575 75.5
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 8.7e-266 920.2 582 73.7
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 1.9e-265 919.1 590 73.1
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 2.8e-264 915.2 637 69.2
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 2.8e-264 915.2 651 68.0
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 3.6e-264 914.8 577 74.4
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 5.3e-263 911.0 649 68.3
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 5.3e-263 911.0 591 72.4
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 1.5e-262 909.4 649 68.1
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 2.0e-262 909.1 581 73.7
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 2.6e-262 908.7 578 74.9
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 7.6e-262 907.1 649 68.1
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 9.9e-262 906.7 585 73.5
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 2.2e-261 905.6 649 68.0
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 6.4e-261 904.0 576 74.5
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 1.9e-260 902.5 606 71.0
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 2.1e-259 899.0 559 75.7
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 3.5e-259 898.3 586 72.5
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 1.0e-258 896.7 620 69.0
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 1.7e-258 896.0 646 69.5
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 4.3e-257 891.3 649 66.4
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 6.2e-256 887.5 595 69.6
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 1.1e-255 886.7 599 69.8
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 1.7e-253 879.4 585 70.9
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 6.4e-253 877.5 655 68.4
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 9.3e-252 873.6 646 65.6
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 6.2e-248 860.9 578 69.0
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 1.5e-246 856.3 614 69.1
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 6.5e-245 850.9 606 69.0
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 1.9e-244 849.4 653 65.8
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 5.5e-244 847.8 594 69.4
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 3.5e-243 845.1 581 70.1
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 6.0e-243 844.3 621 66.3
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 1.8e-242 842.8 580 69.5
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 1.8e-242 842.8 617 68.1
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 2.3e-242 842.4 618 68.1
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 2.3e-242 842.4 618 68.1
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 2.5e-241 839.0 617 66.5
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 8.2e-240 833.9 653 64.9
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 3.4e-238 828.6 588 66.8
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 4.2e-236 821.6 657 64.7
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 7.1e-236 820.8 625 65.0
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 3.9e-234 815.1 653 64.5
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 3.7e-232 808.5 652 61.3
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 9.0e-231 803.9 575 65.4
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 1.6e-219 766.5 619 62.2
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 3.9e-218 761.9 575 65.7
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 5.5e-212 741.5 576 62.5
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 7.2e-196 688.0 583 59.7
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 3.0e-194 682.6 560 58.4
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 5.7e-193 678.3 579 57.9
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 3.6e-187 659.1 525 62.5
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 1.0e-186 657.5 585 55.9
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 4.9e-176 622.1 664 51.1
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 3.9e-173 612.5 636 50.9
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 4.4e-169 599.0 373 71.8
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 9.2e-167 591.3 617 50.6
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 4.8e-139 499.2 518 51.5
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 3.8e-128 463.0 255 82.0
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 2.4e-98 364.0 210 80.5
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 1.1e-79 302.0 219 69.4
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 1.3e-67 261.9 196 60.7
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 3.4e-60 237.3 218 57.3
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 3.5e-49 200.7 107 85.0
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 3.9e-40 170.6 131 58.0
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 3.8e-27 127.5 101 56.4
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 4.9e-27 127.1 80 76.2
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 1.0e-24 119.4 65 80.0
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 5.6e-23 113.6 78 66.7
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 2.7e-17 94.7 109 53.2
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 6.2e-14 83.6 43 88.4
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 1.4e-13 82.4 37 97.3
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 2.9e-11 74.7 39 84.6
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 1.1e-10 72.8 62 53.2
Zm00001eb027230 Zea mays HOM05D006696 ORTHO05D008683 2.8e-06 58.2 71 47.9


User provided reference genes

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