Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G262800 Manihot esculenta HOM05D002977 ORTHO05D003225 6.4e-194 680.6 361 100.0
Manes.05G040400 Manihot esculenta HOM05D002977 ORTHO05D003225 9.6e-81 304.7 427 49.2
Sabra02G0121100 Salix brachista HOM05D002977 ORTHO05D003225 1.1e-55 221.5 493 37.7
Potri.002G152700 Populus trichocarpa HOM05D002977 ORTHO05D003225 3.4e-54 216.5 490 38.2
Potri.014G077400 Populus trichocarpa HOM05D002977 ORTHO05D003225 7.9e-51 205.3 495 36.6
COL.COLO4_06963 Corchorus olitorius HOM05D002977 ORTHO05D003225 1.8e-50 204.1 461 38.0
Sabra14G0054900 Salix brachista HOM05D002977 ORTHO05D003225 3.9e-50 203.0 490 35.9
Thecc.01G369200 Theobroma cacao HOM05D002977 ORTHO05D003225 3.7e-48 196.4 458 37.3
Duzib138G0317 Durio zibethinus HOM05D002977 ORTHO05D003225 2.4e-47 193.7 489 36.0
Gorai.004G156200 Gossypium raimondii HOM05D002977 ORTHO05D003225 2.0e-46 190.7 387 40.8
Gohir.A08G129200 Gossypium hirsutum HOM05D002977 ORTHO05D003225 7.7e-46 188.7 387 41.3
Gohir.D08G150500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 3.8e-45 186.4 387 39.5
Prupe.2G153900 Prunus persica HOM05D002977 ORTHO05D003225 4.2e-44 183.0 430 40.2
FvH4_7g12980 Fragaria vesca HOM05D002977 ORTHO05D003225 1.1e-41 174.9 437 38.2
Cpa.g.c33531 Carica papaya HOM05D002977 ORTHO05D003225 1.5e-41 174.5 452 36.9
FAN06G3334 Fragaria x ananassa HOM05D002977 ORTHO05D003225 2.6e-41 173.7 434 38.2
FAN10G0205 Fragaria x ananassa HOM05D002977 ORTHO05D003225 7.4e-41 172.2 435 36.1
Haze_15232 Corylus avellana HOM05D002977 ORTHO05D003225 2.8e-40 170.2 427 36.5
FAN10G1938 Fragaria x ananassa HOM05D002977 ORTHO05D003225 2.8e-40 170.2 436 35.8
RcHm_v2.0_Chr1g0352121 Rosa chinensis HOM05D002977 ORTHO05D003225 2.8e-40 170.2 454 37.0
FAN06G4128 Fragaria x ananassa HOM05D002977 ORTHO05D003225 4.8e-40 169.5 445 37.5
Cfa004177 Carpinus fangiana HOM05D002977 ORTHO05D003225 6.3e-40 169.1 418 39.5
Ciclev10020246m.g Citrus clementina HOM05D002977 ORTHO05D003225 3.1e-39 166.8 436 35.6
QL08p050716 Quercus lobata HOM05D002977 ORTHO05D003225 2.0e-38 164.1 429 35.9
MD01G1047600 Malus domestica HOM05D002977 ORTHO05D003225 6.5e-37 159.1 446 36.8
FAN01G0110 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.9e-36 157.5 455 35.6
GSVIVG01027598001 Vitis vinifera HOM05D002977 ORTHO05D003225 4.2e-36 156.4 409 35.9
MD07G1125600 Malus domestica HOM05D002977 ORTHO05D003225 1.1e-33 148.3 457 34.8
Dinv43754 Davidia involucrata HOM05D002977 ORTHO05D003225 2.2e-32 144.1 396 33.6
CANSAT56G0238 Cannabis sativa HOM05D002977 ORTHO05D003225 5.3e-31 139.4 454 32.4
DCAR_008585 Daucus carota HOM05D002977 ORTHO05D003225 2.0e-30 137.5 384 33.9
Peaxi162Scf00021g00041 Petunia axillaris HOM05D002977 ORTHO05D003225 4.5e-30 136.3 439 31.4
PGSC0003DMG400017053 Solanum tuberosum HOM05D002977 ORTHO05D003225 1.0e-29 135.2 396 31.3
Oeu059227.1 Olea europaea HOM05D002977 ORTHO05D003225 2.2e-29 134.0 375 34.1
Oeu059228.1 Olea europaea HOM05D002977 ORTHO05D003225 2.9e-29 133.7 375 34.1
CAN.G170.54 Capsicum annuum HOM05D002977 ORTHO05D003225 5.0e-29 132.9 425 32.0
DCAR_006904 Daucus carota HOM05D002977 ORTHO05D003225 2.1e-27 127.5 371 32.3
Hma1.2p1_0132F.1_g060810 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 8.0e-27 125.6 426 30.5
TWI14G0163 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 3.0e-26 123.6 388 38.1
Sopen01g037600 Solanum pennellii HOM05D002977 ORTHO05D003225 2.0e-25 120.9 398 32.2
A03p32000 Brassica napus HOM05D002977 ORTHO05D003225 2.6e-25 120.6 414 31.2
Eucgr.E00281 Eucalyptus grandis HOM05D002977 ORTHO05D003225 3.3e-25 120.2 420 34.5
Solyc01g091830.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 5.7e-25 119.4 398 30.4
Oeu024421.1 Olea europaea HOM05D002977 ORTHO05D003225 3.7e-24 116.7 357 33.9
Peaxi162Scf00233g00015 Petunia axillaris HOM05D002977 ORTHO05D003225 1.4e-23 114.8 435 30.3
BcaB01g02155 Brassica carinata HOM05D002977 ORTHO05D003225 2.4e-23 114.0 421 30.6
Oeu024422.1 Olea europaea HOM05D002977 ORTHO05D003225 2.4e-23 114.0 357 33.6
Lalb_Chr10g0097561 Lupinus albus HOM05D002977 ORTHO05D003225 7.0e-23 112.5 399 31.8
BcaC01g06858 Brassica carinata HOM05D002977 ORTHO05D003225 2.0e-22 110.9 420 29.0
Nitab4.5_0004550g0040 Nicotiana tabacum HOM05D002977 ORTHO05D003225 4.5e-22 109.8 439 30.8
Actinidia33447 Actinidia chinensis HOM05D002977 ORTHO05D003225 5.9e-22 109.4 404 30.7
Nitab4.5_0003356g0060 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.0e-21 108.6 405 29.9
THA.LOC104801463 Tarenaya hassleriana HOM05D002977 ORTHO05D003225 1.7e-21 107.8 452 29.9
BraA03t12372Z Brassica rapa HOM05D002977 ORTHO05D003225 2.2e-21 107.5 427 30.0
Atru.chr5.400 Acer truncatum HOM05D002977 ORTHO05D003225 2.9e-21 107.1 264 43.9
C03p39020 Brassica napus HOM05D002977 ORTHO05D003225 2.9e-21 107.1 420 29.3
BolC3t16174H Brassica oleracea HOM05D002977 ORTHO05D003225 2.9e-21 107.1 420 29.3
Lj3g0026127 Lotus japonicus HOM05D002977 ORTHO05D003225 1.5e-20 104.8 450 32.7
CARHR248960 Cardamine hirsuta HOM05D002977 ORTHO05D003225 2.5e-20 104.0 446 32.5
Cc02_g37200 Coffea canephora HOM05D002977 ORTHO05D003225 3.2e-20 103.6 400 30.8
Migut.B01683 Erythranthe guttata HOM05D002977 ORTHO05D003225 3.2e-20 103.6 385 31.4
Nitab4.5_0000134g0230 Nicotiana tabacum HOM05D002977 ORTHO05D003225 4.2e-20 103.2 404 30.2
TWI59G0633 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 5.5e-20 102.8 267 40.8
VMungo0331G1467 Vigna mungo HOM05D002977 ORTHO05D003225 5.5e-20 102.8 428 29.0
AL6G52680 Arabidopsis lyrata HOM05D002977 ORTHO05D003225 9.4e-20 102.1 287 39.4
Carub.0006s3643 Capsella rubella HOM05D002977 ORTHO05D003225 9.4e-20 102.1 436 31.9
vmacro20976 Vaccinium macrocarpon HOM05D002977 ORTHO05D003225 1.2e-19 101.7 415 29.2
CsaV3_3G009320 Cucumis sativus L. HOM05D002977 ORTHO05D003225 2.1e-19 100.9 370 36.8
Medtr8g032770 Medicago truncatula HOM05D002977 ORTHO05D003225 2.1e-19 100.9 422 29.4
PGR042G2435 Punica granatum HOM05D002977 ORTHO05D003225 2.7e-19 100.5 447 28.2
MELO3C006152.2 Cucumis melo HOM05D002977 ORTHO05D003225 6.1e-19 99.4 339 36.0
Glyma.03G017800 Glycine max HOM05D002977 ORTHO05D003225 6.1e-19 99.4 428 29.2
Glyma.07G079500 Glycine max HOM05D002977 ORTHO05D003225 6.1e-19 99.4 423 29.6
SalBow3G1388 Salvia bowleyana HOM05D002977 ORTHO05D003225 1.8e-18 97.8 349 27.5
Nn6g34271 Nelumbo nucifera HOM05D002977 ORTHO05D003225 2.3e-18 97.4 504 29.2
Dinv37695 Davidia involucrata HOM05D002977 ORTHO05D003225 3.0e-18 97.1 481 27.4
Thhalv10029270m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 3.0e-18 97.1 444 30.0
MSTRG.20788 Avicennia marina HOM05D002977 ORTHO05D003225 8.8e-18 95.5 386 30.8
ClCG05G001920 Citrullus lanatus HOM05D002977 ORTHO05D003225 8.8e-18 95.5 364 34.6
Sp6g00770 Schrenkiella parvula HOM05D002977 ORTHO05D003225 8.8e-18 95.5 259 39.0
AT4G00770 Arabidopsis thaliana HOM05D002977 ORTHO05D003225 2.0e-17 94.4 287 39.0
MBI04_g42596_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 7.5e-17 92.4 440 28.4
Aa31LG5G240 Aethionema arabicum HOM05D002977 ORTHO05D003225 1.3e-16 91.7 482 26.3
Nitab4.5_0010430g0070 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.3e-16 91.7 356 29.8
Nn1g01342 Nelumbo nucifera HOM05D002977 ORTHO05D003225 8.3e-16 89.0 498 30.1
CSS0040991 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 4.1e-15 86.7 429 30.3
TAR629G3293 Trochodendron aralioides HOM05D002977 ORTHO05D003225 7.0e-15 85.9 414 30.4
arahy.Tifrunner.gnm1.ann1.XNH79U Arachis hypogaea HOM05D002977 ORTHO05D003225 9.1e-15 85.5 444 30.6
arahy.Tifrunner.gnm1.ann1.YQQF81 Arachis hypogaea HOM05D002977 ORTHO05D003225 2.0e-14 84.3 444 30.4
Psat4g151680 Pisum sativum HOM05D002977 ORTHO05D003225 5.9e-14 82.8 428 29.0
HanXRQChr06g0168991 Helianthus annuus HOM05D002977 ORTHO05D003225 7.7e-14 82.4 367 26.7
Lsat_1_v5_gn_7_8261 Lactuca sativa HOM05D002977 ORTHO05D003225 1.0e-13 82.0 408 27.2
Dinv39013 Davidia involucrata HOM05D002977 ORTHO05D003225 2.9e-13 80.5 422 30.3
Phvul.010G089700 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 2.9e-13 80.5 253 34.4
Aqoxy7G00463 Aquilegia oxysepala HOM05D002977 ORTHO05D003225 8.6e-13 79.0 461 29.9
Duzib133G0091 Durio zibethinus HOM05D002977 ORTHO05D003225 1.2e-11 75.1 123 41.5
CiPaw.02G024700 Carya illinoinensis HOM05D002977 ORTHO05D003225 1.0e-10 72.0 126 39.7
TWI81G0253 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 1.4e-10 71.6 480 24.4
Manes.01G067700 Manihot esculenta HOM05D002977 ORTHO05D003225 4.0e-10 70.1 480 25.8
Sed0021237 Sechium edule HOM05D002977 ORTHO05D003225 4.4e-09 66.6 344 31.1
SGA_v2.0_scaffold153G37063 Striga asiatica HOM05D002977 ORTHO05D003225 4.4e-09 66.6 393 24.4
Prupe.5G089800 Prunus persica HOM05D002977 ORTHO05D003225 1.7e-08 64.7 284 31.0
Ca_23758_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 2.2e-08 64.3 242 33.5
Hund16963 Selenicereus undatus HOM05D002977 ORTHO05D003225 2.8e-08 63.9 379 27.2
RcHm_v2.0_Chr7g0199421 Rosa chinensis HOM05D002977 ORTHO05D003225 1.1e-07 62.0 505 25.5
Migut.E01299 Erythranthe guttata HOM05D002977 ORTHO05D003225 4.1e-07 60.1 371 28.3
Hma1.2p1_0371F.1_g138190 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 7.8e-06 55.8 131 32.1


User provided reference genes

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