Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G247900 Manihot esculenta HOM05D008687 ORTHO05D010822 7.2e-22 106.3 52 100.0
Manes.05G025100 Manihot esculenta HOM05D008687 ORTHO05D010822 7.7e-16 86.3 52 78.8
TAR374G0349 Trochodendron aralioides HOM05D008687 ORTHO05D010822 2.2e-15 84.7 52 76.9
Phvul.010G111800 Phaseolus vulgaris HOM05D008687 ORTHO05D010822 2.9e-15 84.3 52 73.1
Glyma.07G057502 Glycine max HOM05D008687 ORTHO05D010822 8.5e-15 82.8 52 71.2
Hma1.2p1_0384F.1_g141170 Hydrangea macrophylla HOM05D008687 ORTHO05D010822 1.1e-14 82.4 52 73.1
CSS0023630 Camellia sinensis var. sinensis HOM05D008687 ORTHO05D010822 2.5e-14 81.3 52 75.0
Glyma.16G026500 Glycine max HOM05D008687 ORTHO05D010822 2.7e-13 77.8 52 65.4
Lalb_Chr10g0100361 Lupinus albus HOM05D008687 ORTHO05D010822 2.7e-13 77.8 52 67.3
Lj3g0001832 Lotus japonicus HOM05D008687 ORTHO05D010822 3.6e-13 77.4 52 69.2
Nitab4.5_0002247g0150 Nicotiana tabacum HOM05D008687 ORTHO05D010822 3.6e-13 77.4 52 73.1
CiPaw.01G073700 Carya illinoinensis HOM05D008687 ORTHO05D010822 4.7e-13 77.0 52 73.1
Nn4g26235 Nelumbo nucifera HOM05D008687 ORTHO05D010822 4.7e-13 77.0 43 83.7
Solyc01g097020.4 Solanum lycopersicum HOM05D008687 ORTHO05D010822 4.7e-13 77.0 52 73.1
Lalb_Chr17g0342441 Lupinus albus HOM05D008687 ORTHO05D010822 1.4e-12 75.5 52 67.3
Sc01g0002900 Simmondsia chinensis HOM05D008687 ORTHO05D010822 1.4e-12 75.5 52 67.3
MD07G1146600 Malus domestica HOM05D008687 ORTHO05D010822 4.0e-12 73.9 52 69.2
Nitab4.5_0006420g0050 Nicotiana tabacum HOM05D008687 ORTHO05D010822 5.2e-12 73.6 51 68.6
Psat4g160200 Pisum sativum HOM05D008687 ORTHO05D010822 6.8e-12 73.2 52 61.5
TPR.G20504 Trifolium pratense HOM05D008687 ORTHO05D010822 6.8e-12 73.2 52 63.5
Ca_26755_v3 Cicer arietinum L. HOM05D008687 ORTHO05D010822 8.8e-12 72.8 52 67.3
Migut.B01844 Erythranthe guttata HOM05D008687 ORTHO05D010822 8.8e-12 72.8 52 71.2
RcHm_v2.0_Chr1g0359021 Rosa chinensis HOM05D008687 ORTHO05D010822 2.0e-11 71.6 52 69.2
Potri.014G095901 Populus trichocarpa HOM05D008687 ORTHO05D010822 2.6e-11 71.2 52 67.3
MD01G1077100 Malus domestica HOM05D008687 ORTHO05D010822 4.4e-11 70.5 52 65.4
Thecc.01G345800 Theobroma cacao HOM05D008687 ORTHO05D010822 2.8e-10 67.8 52 65.4
COL.COLO4_06317 Corchorus olitorius HOM05D008687 ORTHO05D010822 3.7e-10 67.4 52 61.5
Gohir.A11G095700 Gossypium hirsutum HOM05D008687 ORTHO05D010822 1.8e-09 65.1 52 63.5
Gohir.D11G100600 Gossypium hirsutum HOM05D008687 ORTHO05D010822 1.8e-09 65.1 52 63.5
Gorai.007G106900 Gossypium raimondii HOM05D008687 ORTHO05D010822 1.8e-09 65.1 52 63.5
Prupe.2G184600 Prunus persica HOM05D008687 ORTHO05D010822 3.1e-09 64.3 52 63.5
Gorai.001G156200 Gossypium raimondii HOM05D008687 ORTHO05D010822 3.5e-08 60.8 42 66.7
HanXRQChr06g0166891 Helianthus annuus HOM05D008687 ORTHO05D010822 3.5e-08 60.8 47 51.1
Gohir.D07G144200 Gossypium hirsutum HOM05D008687 ORTHO05D010822 7.7e-08 59.7 42 64.3
Nn1g02205 Nelumbo nucifera HOM05D008687 ORTHO05D010822 1.0e-07 59.3 33 84.8
unitig_52.g17066 Utricularia gibba HOM05D008687 ORTHO05D010822 1.7e-07 58.5 53 54.7
FAN10G1050 Fragaria x ananassa HOM05D036424 ORTHO05D010822 6.5e-07 56.6 33 78.8
FAN10G4301 Fragaria x ananassa HOM05D036424 ORTHO05D010822 6.5e-07 56.6 33 78.8
Cc02_g39090 Coffea canephora HOM05D008687 ORTHO05D010822 1.1e-06 55.8 33 78.8
FAN03G1283 Fragaria x ananassa HOM05D008687 ORTHO05D010822 1.5e-06 55.5 34 73.5
FAN06G2082 Fragaria x ananassa HOM05D036424 ORTHO05D010822 1.5e-06 55.5 34 73.5
SalBow3G0692 Salvia bowleyana HOM05D008687 ORTHO05D010822 2.5e-06 54.7 33 69.7


User provided reference genes

Program Settings