Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G232200 Manihot esculenta HOM05D008942 ORTHO05D009202 1.1e-63 246.5 123 100.0
Manes.01G232300 Manihot esculenta HOM05D008942 ORTHO05D009202 2.2e-61 238.8 123 96.7
Potri.014G115800 Populus trichocarpa HOM05D008942 ORTHO05D009202 1.8e-18 96.3 128 50.0
Potri.002G190700 Populus trichocarpa HOM05D008942 ORTHO05D009202 6.7e-18 94.4 131 51.1
Sabra14G0085900 Salix brachista HOM05D008942 ORTHO05D009202 3.3e-17 92.0 129 48.1
Sabra02G0164800 Salix brachista HOM05D008942 ORTHO05D009202 3.7e-16 88.6 130 47.7
QL12p033964 Quercus lobata HOM05D008942 ORTHO05D009202 6.9e-15 84.3 127 47.2
Thecc.01G321000 Theobroma cacao HOM05D008942 ORTHO05D009202 1.2e-14 83.6 125 48.8
QL12p033984 Quercus lobata HOM05D008942 ORTHO05D009202 1.5e-14 83.2 126 46.0
QL12p034826 Quercus lobata HOM05D008942 ORTHO05D009202 1.1e-12 77.0 123 46.3
CiPaw.08G085100 Carya illinoinensis HOM05D008942 ORTHO05D009202 1.4e-10 70.1 132 39.4
CiPaw.07G122100 Carya illinoinensis HOM05D008942 ORTHO05D009202 3.0e-10 68.9 117 41.9
CiPaw.07G122200 Carya illinoinensis HOM05D008942 ORTHO05D009202 1.5e-09 66.6 132 43.2
Duzib138G1053 Durio zibethinus HOM05D008942 ORTHO05D009202 1.5e-09 66.6 133 39.1
Haze_05106 Corylus avellana HOM05D008942 ORTHO05D009202 2.6e-09 65.9 100 44.0
Cfa004866 Carpinus fangiana HOM05D008942 ORTHO05D009202 3.3e-09 65.5 101 41.6
Cfa004867 Carpinus fangiana HOM05D008942 ORTHO05D009202 5.7e-09 64.7 86 41.9
CiPaw.08G085000 Carya illinoinensis HOM05D008942 ORTHO05D009202 7.4e-09 64.3 145 31.7
Nn4g25439 Nelumbo nucifera HOM05D008325 ORTHO05D010336 9.7e-09 63.9 101 42.6
Cpa.g.sc1096.1 Carica papaya HOM05D008942 ORTHO05D009202 1.7e-08 63.2 136 35.3
CiPaw.08G152800 Carya illinoinensis HOM05D009264 ORTHO05D009202 2.2e-08 62.8 128 39.1
MD17G1279600 Malus domestica HOM05D008942 ORTHO05D009202 2.2e-08 62.8 95 45.3
Atru.chr5.920 Acer truncatum HOM05D008942 ORTHO05D009202 3.7e-08 62.0 110 40.9
Ciclev10013538m.g Citrus clementina HOM05D009264 ORTHO05D009202 4.8e-08 61.6 134 33.6
Ciclev10022668m.g Citrus clementina HOM05D008942 ORTHO05D009202 8.2e-08 60.8 121 42.1
Duzib138G0801 Durio zibethinus HOM05D022988 ORTHO05D012858 8.2e-08 60.8 99 39.4
RcHm_v2.0_Chr3g0457951 Rosa chinensis HOM05D009264 ORTHO05D009202 8.2e-08 60.8 125 40.8
Lj5g0018092 Lotus japonicus HOM05D008942 ORTHO05D009202 1.4e-07 60.1 131 42.0
Nn4g25438 Nelumbo nucifera HOM05D008942 ORTHO05D009202 3.1e-07 58.9 91 39.6
TWI59G1203 Tripterygium wilfordii HOM05D008942 ORTHO05D009202 3.1e-07 58.9 74 44.6
CiPaw.08G085200 Carya illinoinensis HOM05D008325 ORTHO05D010336 5.3e-07 58.2 121 33.1
QL03p008780 Quercus lobata HOM05D009264 ORTHO05D009202 5.3e-07 58.2 69 46.4
QL03p013046 Quercus lobata HOM05D009264 ORTHO05D009202 5.3e-07 58.2 69 46.4
Gohir.D08G142200 Gossypium hirsutum HOM05D008942 ORTHO05D009202 9.1e-07 57.4 110 39.1
Gorai.004G146500 Gossypium raimondii HOM05D008942 ORTHO05D009202 2.0e-06 56.2 110 39.1
Thecc.05G327000 Theobroma cacao HOM05D021022 ORTHO05D009202 2.0e-06 56.2 107 38.3
PGR083G1195 Punica granatum HOM05D009264 ORTHO05D009202 3.4e-06 55.5 86 41.9
TAR365G0423 Trochodendron aralioides HOM05D008325 ORTHO05D010336 3.4e-06 55.5 106 34.9
Cfa006734 Carpinus fangiana HOM05D009264 ORTHO05D009202 4.5e-06 55.1 67 40.3
Haze_05107 Corylus avellana HOM05D008942 ORTHO05D009202 4.5e-06 55.1 91 39.6
Nn3g21851 Nelumbo nucifera HOM05D008325 ORTHO05D010336 4.5e-06 55.1 113 38.1
Atru.chr5.921 Acer truncatum HOM05D008325 ORTHO05D010336 5.9e-06 54.7 118 34.7
TPR.G3019 Trifolium pratense HOM05D008942 ORTHO05D009202 5.9e-06 54.7 107 40.2
Gorai.007G120200 Gossypium raimondii HOM05D008942 ORTHO05D009202 7.7e-06 54.3 112 35.7


User provided reference genes

Program Settings