Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G232100 Manihot esculenta HOM05D008325 ORTHO05D010336 2.8e-58 228.4 115 100.0
Potri.002G190800 Populus trichocarpa HOM05D008325 ORTHO05D010336 1.0e-23 113.6 120 60.0
Duzib133G0176 Durio zibethinus HOM05D008325 ORTHO05D010336 2.2e-23 112.5 106 58.5
Manes.05G011600 Manihot esculenta HOM05D008325 ORTHO05D010336 5.0e-23 111.3 120 60.0
Duzib138G1904 Durio zibethinus HOM05D008325 ORTHO05D010336 4.6e-21 104.8 111 55.9
Duzib211G0526 Durio zibethinus HOM05D008325 ORTHO05D010336 6.7e-20 100.9 109 53.2
Sabra02G0164700 Salix brachista HOM05D008325 ORTHO05D010336 3.3e-19 98.6 119 53.8
QL12p033939 Quercus lobata HOM05D008325 ORTHO05D010336 4.3e-19 98.2 117 50.4
Atru.chr5.921 Acer truncatum HOM05D008325 ORTHO05D010336 2.4e-17 92.4 136 52.9
QL12p034783 Quercus lobata HOM05D008325 ORTHO05D010336 4.1e-17 91.7 117 48.7
COL.COLO4_23173 Corchorus olitorius HOM05D008325 ORTHO05D010336 1.2e-16 90.1 115 49.6
Gorai.004G049600 Gossypium raimondii HOM05D008325 ORTHO05D010336 5.9e-16 87.8 104 51.9
Gohir.A08G039900 Gossypium hirsutum HOM05D008325 ORTHO05D010336 7.7e-16 87.4 104 51.9
Gohir.D08G050000 Gossypium hirsutum HOM05D008325 ORTHO05D010336 7.7e-16 87.4 103 50.5
Gohir.A12G122200 Gossypium hirsutum HOM05D008325 ORTHO05D010336 1.3e-15 86.7 127 47.2
Thecc.01G320800 Theobroma cacao HOM05D008325 ORTHO05D010336 1.7e-15 86.3 122 49.2
Gohir.D12G125800 Gossypium hirsutum HOM05D008325 ORTHO05D010336 5.0e-15 84.7 125 48.0
Gorai.008G136800 Gossypium raimondii HOM05D008325 ORTHO05D010336 5.0e-15 84.7 125 48.0
TAR365G0423 Trochodendron aralioides HOM05D008325 ORTHO05D010336 2.1e-13 79.3 103 44.7
Dinv33149 Davidia involucrata HOM05D008325 ORTHO05D010336 7.9e-13 77.4 119 46.2
CiPaw.07G122000 Carya illinoinensis HOM05D008325 ORTHO05D010336 1.4e-12 76.6 102 45.1
Oeu038060.1 Olea europaea HOM05D008325 ORTHO05D010336 1.5e-11 73.2 125 40.0
Dinv12107 Davidia involucrata HOM05D008325 ORTHO05D010336 5.7e-11 71.2 124 43.5
CiPaw.08G085200 Carya illinoinensis HOM05D008325 ORTHO05D010336 9.7e-11 70.5 128 40.6
Nn3g21852 Nelumbo nucifera HOM05D008325 ORTHO05D010336 9.7e-11 70.5 119 41.2
Nn4g25441 Nelumbo nucifera HOM05D008325 ORTHO05D010336 1.1e-09 67.0 115 39.1
Glyma.19G219600 Glycine max HOM05D008325 ORTHO05D010336 1.2e-08 63.5 128 42.2
ClCG09G004800 Citrullus lanatus HOM05D023270 ORTHO05D010336 1.5e-08 63.2 134 35.8
Nn4g25439 Nelumbo nucifera HOM05D008325 ORTHO05D010336 1.5e-08 63.2 99 43.4
Cpa.g.sc1096.2 Carica papaya HOM05D008325 ORTHO05D010336 3.4e-08 62.0 77 50.6
Oeu009100.1 Olea europaea HOM05D007843 ORTHO05D003639 4.5e-08 61.6 112 36.6
Ciclev10022863m.g Citrus clementina HOM05D008325 ORTHO05D010336 2.9e-07 58.9 135 37.8
Gohir.A11G107100 Gossypium hirsutum HOM05D008325 ORTHO05D010336 8.5e-07 57.4 51 60.8
QL12p033964 Quercus lobata HOM05D008942 ORTHO05D009202 1.1e-06 57.0 110 40.0
Sed0014576 Sechium edule HOM05D023270 ORTHO05D010336 1.9e-06 56.2 107 41.1
Glyma.02G009500 Glycine max HOM05D008325 ORTHO05D010336 2.5e-06 55.8 121 36.4
QL12p034826 Quercus lobata HOM05D008942 ORTHO05D009202 4.2e-06 55.1 98 40.8
Gohir.D11G112050 Gossypium hirsutum HOM05D008325 ORTHO05D010336 7.2e-06 54.3 51 58.8
Thecc.01G321000 Theobroma cacao HOM05D008942 ORTHO05D009202 7.2e-06 54.3 98 37.8
CSS0037105 Camellia sinensis var. sinensis HOM05D008325 ORTHO05D010336 9.4e-06 53.9 120 36.7


User provided reference genes

Program Settings