Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 4.4e-112 407.9 199 100.0
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 5.5e-54 214.9 121 84.3
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.2e-53 213.8 122 83.6
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 6.7e-52 208.0 120 82.5
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 8.8e-52 207.6 123 81.3
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 1.1e-51 207.2 120 81.7
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 2.6e-51 206.1 122 80.3
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 5.7e-51 204.9 126 81.0
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 1.3e-50 203.8 120 80.8
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 1.3e-50 203.8 135 74.1
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 6.3e-50 201.4 119 79.8
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 1.1e-49 200.7 132 75.8
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 1.1e-49 200.7 136 73.5
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 1.8e-49 199.9 118 81.4
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 3.1e-49 199.1 118 78.8
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 4.1e-49 198.7 131 71.0
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 7.0e-49 198.0 122 76.2
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 1.2e-48 197.2 118 78.0
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 1.6e-48 196.8 125 76.0
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 2.0e-48 196.4 118 78.0
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 2.0e-48 196.4 132 73.5
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 2.6e-48 196.1 119 75.6
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 5.9e-48 194.9 120 76.7
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 7.7e-48 194.5 118 78.8
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 1.3e-47 193.7 118 76.3
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 1.7e-47 193.4 119 76.5
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 2.9e-47 192.6 121 74.4
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 3.8e-47 192.2 122 76.2
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 5.0e-47 191.8 132 68.9
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 6.5e-47 191.4 121 73.6
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 8.5e-47 191.0 132 71.2
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 1.5e-46 190.3 123 74.8
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 3.2e-46 189.1 120 72.5
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 3.2e-46 189.1 119 73.9
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 4.2e-46 188.7 132 72.0
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 7.2e-46 188.0 127 70.9
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 1.6e-45 186.8 132 70.5
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 2.1e-45 186.4 120 72.5
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 2.7e-45 186.0 117 73.5
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 2.7e-45 186.0 119 73.1
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 3.6e-45 185.7 112 78.6
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 8.0e-45 184.5 132 69.7
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 1.0e-44 184.1 132 69.7
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 1.4e-44 183.7 120 73.3
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 1.8e-44 183.3 120 74.2
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 1.8e-44 183.3 132 68.2
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 3.0e-44 182.6 128 69.5
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 5.2e-44 181.8 123 72.4
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 8.8e-44 181.0 122 72.1
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 2.0e-43 179.9 119 71.4
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 2.6e-43 179.5 102 84.3
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 3.3e-43 179.1 120 67.5
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 4.4e-43 178.7 135 68.9
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 9.7e-43 177.6 120 70.0
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 8.2e-42 174.5 149 60.4
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 1.1e-41 174.1 123 66.7
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 1.8e-41 173.3 123 63.4
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 4.1e-41 172.2 122 68.9
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 5.3e-41 171.8 120 65.0
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 5.3e-41 171.8 116 66.4
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 5.3e-41 171.8 120 65.8
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 7.0e-41 171.4 116 66.4
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 9.1e-41 171.0 121 67.8
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 1.2e-40 170.6 118 65.3
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 1.2e-40 170.6 118 65.3
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 1.2e-40 170.6 118 65.3
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 1.2e-40 170.6 118 65.3
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 1.6e-40 170.2 120 65.0
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.0e-40 169.9 159 57.9
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 3.5e-40 169.1 122 66.4
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 5.9e-40 168.3 120 62.5
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 2.2e-39 166.4 127 63.0
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 3.8e-39 165.6 123 64.2
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 8.5e-39 164.5 120 62.5
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 2.5e-38 162.9 120 67.5
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 5.5e-38 161.8 127 62.2
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 1.2e-37 160.6 117 66.7
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 1.6e-37 160.2 110 69.1
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.6e-37 160.2 102 74.5
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 3.6e-37 159.1 122 65.6
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 1.7e-34 150.2 132 59.8
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 8.3e-34 147.9 114 63.2
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 1.8e-28 130.2 127 53.5
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 2.6e-27 126.3 79 75.9
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 9.8e-27 124.4 80 71.2
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.7e-26 123.6 80 72.5
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 1.4e-25 120.6 112 53.6
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 5.4e-25 118.6 113 50.4
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 7.8e-24 114.8 90 64.4
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 1.5e-19 100.5 62 75.8
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 3.7e-18 95.9 83 61.4
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 1.4e-17 94.0 110 45.5
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 1.9e-14 83.6 104 44.2
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 1.5e-11 73.9 86 46.5
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 1.1e-09 67.8 98 43.9
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 4.1e-09 65.9 53 64.2


User provided reference genes

Program Settings