Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 9.7e-104 380.2 196 100.0
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 4.4e-72 275.0 195 73.3
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 2.4e-70 269.2 195 71.3
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 3.2e-70 268.9 195 70.8
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 4.1e-70 268.5 196 72.4
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 3.0e-68 262.3 194 70.6
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 6.6e-68 261.2 197 71.1
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 8.6e-68 260.8 196 70.9
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 1.1e-67 260.4 196 71.4
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 1.5e-67 260.0 197 70.6
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 1.5e-67 260.0 198 70.7
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.5e-67 260.0 194 70.1
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 3.3e-67 258.8 197 70.6
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 3.3e-67 258.8 194 69.6
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 7.3e-67 257.7 180 74.4
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 9.5e-67 257.3 195 70.3
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 2.8e-66 255.8 197 71.6
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 1.4e-65 253.4 193 69.9
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 1.8e-65 253.1 201 70.1
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 3.1e-65 252.3 181 74.0
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 3.1e-65 252.3 211 68.2
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 4.0e-65 251.9 197 71.1
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 8.9e-65 250.8 162 77.2
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 1.2e-64 250.4 162 77.2
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 2.6e-64 249.2 227 61.2
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 2.6e-64 249.2 227 61.2
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 3.4e-64 248.8 177 72.9
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 9.9e-64 247.3 169 74.6
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 1.3e-63 246.9 195 70.8
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 2.2e-63 246.1 197 66.0
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 2.2e-63 246.1 177 72.9
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 4.9e-63 245.0 193 69.4
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 6.4e-63 244.6 169 74.6
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.9e-62 243.0 201 66.2
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 2.4e-62 242.7 188 68.6
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 2.4e-62 242.7 201 66.2
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 2.4e-62 242.7 196 67.3
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 9.2e-62 240.7 174 71.3
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 9.2e-62 240.7 193 67.9
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 1.0e-60 237.3 197 64.0
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 1.3e-60 236.9 160 73.8
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 2.3e-60 236.1 191 70.2
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 3.0e-60 235.7 181 68.0
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 3.0e-60 235.7 182 67.6
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 3.9e-60 235.3 143 81.1
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 8.6e-60 234.2 185 67.6
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 8.6e-60 234.2 196 64.3
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 8.6e-60 234.2 177 69.5
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.1e-59 233.8 177 70.1
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 2.5e-59 232.6 196 65.8
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 3.3e-59 232.3 176 69.9
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 5.6e-59 231.5 175 70.3
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 2.1e-58 229.6 148 77.0
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 6.2e-58 228.0 196 63.3
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 1.1e-57 227.3 141 78.7
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 1.4e-57 226.9 141 80.9
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 4.0e-57 225.3 163 72.4
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 4.0e-57 225.3 143 81.8
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 6.8e-57 224.6 183 69.4
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 4.4e-56 221.9 231 56.3
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 5.8e-56 221.5 192 65.6
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 5.8e-56 221.5 195 63.1
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 7.6e-56 221.1 151 74.2
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 7.6e-56 221.1 139 80.6
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 9.9e-56 220.7 154 75.3
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 9.9e-56 220.7 137 78.8
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 1.3e-55 220.3 135 83.7
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 1.7e-55 219.9 196 64.3
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 2.2e-55 219.5 135 82.2
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 2.2e-55 219.5 171 66.7
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 4.9e-55 218.4 140 82.1
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 4.9e-55 218.4 140 82.1
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 4.9e-55 218.4 140 82.1
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 8.4e-55 217.6 192 64.6
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.1e-54 217.2 152 71.7
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 1.9e-54 216.5 188 63.3
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 1.9e-54 216.5 172 68.6
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 1.9e-54 216.5 132 83.3
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 7.1e-54 214.5 211 57.8
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 1.6e-53 213.4 132 82.6
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 6.0e-53 211.5 132 83.3
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 7.8e-53 211.1 152 69.7
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 2.5e-51 206.1 124 84.7
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 3.6e-50 202.2 143 74.1
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 1.1e-49 200.7 162 64.8
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 1.9e-46 189.9 132 71.2
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 9.3e-46 187.6 128 71.1
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 9.6e-43 177.6 147 69.4
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 2.1e-42 176.4 219 49.8
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 1.1e-41 174.1 104 86.5
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 1.4e-41 173.7 102 87.3
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 5.3e-41 171.8 122 69.7
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 9.0e-41 171.0 107 83.2
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 2.0e-40 169.9 106 80.2
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 3.4e-40 169.1 103 85.4
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 1.6e-37 160.2 97 83.5
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 3.5e-37 159.1 111 73.9
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 6.0e-37 158.3 103 76.7
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 3.9e-36 155.6 102 76.5
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 5.6e-35 151.8 182 52.2
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 1.5e-32 143.7 102 72.5
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 2.0e-32 143.3 127 59.1
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 3.8e-31 139.0 181 47.0
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 4.9e-31 138.7 176 46.6
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 1.6e-29 133.7 126 52.4
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 1.5e-27 127.1 79 82.3
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.5e-24 117.1 71 87.3
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.5e-24 117.1 71 87.3
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 3.4e-24 115.9 93 65.6
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 4.2e-22 109.0 75 66.7
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 7.1e-22 108.2 138 49.3
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 4.6e-21 105.5 63 82.5
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 2.5e-19 99.8 68 70.6
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 2.2e-15 86.7 109 38.5
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 1.8e-09 67.0 39 79.5
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 1.8e-09 67.0 39 79.5


User provided reference genes

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