Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 4.0e-184 647.9 316 100.0
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 1.2e-138 496.9 313 76.4
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 7.5e-138 494.2 309 76.7
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 3.1e-136 488.8 294 79.9
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 2.9e-134 482.3 315 73.7
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 7.2e-133 477.6 313 72.8
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 7.2e-133 477.6 318 73.0
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.4e-131 473.4 315 73.3
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 4.0e-131 471.9 315 73.0
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 5.2e-131 471.5 315 73.0
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 8.8e-131 470.7 355 66.2
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 7.5e-130 467.6 319 70.8
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 3.7e-129 465.3 310 72.6
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.4e-128 462.6 328 70.1
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 5.4e-128 461.5 306 71.6
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 7.0e-128 461.1 318 70.8
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 8.0e-124 447.6 343 63.6
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.8e-121 439.1 310 70.0
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 8.3e-121 437.6 353 62.0
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 1.6e-119 433.3 301 67.1
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 3.9e-118 428.7 311 67.8
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 6.6e-118 427.9 310 65.5
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 7.3e-117 424.5 300 67.0
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 1.2e-116 423.7 300 67.0
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 4.7e-116 421.8 305 64.6
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 6.1e-116 421.4 322 62.7
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.8e-115 419.9 290 67.9
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 8.9e-115 417.5 322 62.1
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 1.2e-114 417.2 322 64.3
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 2.6e-114 416.0 255 75.3
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.6e-114 416.0 290 66.9
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 3.4e-114 415.6 315 65.4
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 3.4e-114 415.6 313 63.6
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 4.9e-113 411.8 305 65.2
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 1.3e-110 403.7 313 59.7
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 8.9e-107 391.0 318 63.5
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 1.2e-106 390.6 306 63.4
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 1.1e-104 384.0 315 62.2
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 1.4e-104 383.6 298 61.7
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 2.4e-104 382.9 295 64.7
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 1.2e-103 380.6 290 61.7
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 3.3e-101 372.5 310 59.7
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 8.9e-99 364.4 308 59.7
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 8.9e-99 364.4 250 69.6
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 1.5e-98 363.6 285 62.1
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 2.6e-98 362.8 313 56.2
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 1.7e-97 360.1 237 70.9
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 3.7e-97 359.0 328 55.5
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 3.7e-97 359.0 304 57.6
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 4.9e-97 358.6 301 57.5
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 3.2e-96 355.9 285 58.9
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 5.4e-96 355.1 288 58.7
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 9.2e-96 354.4 317 54.9
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.6e-95 353.6 315 54.0
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 3.5e-95 352.4 287 57.5
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 4.6e-95 352.1 283 58.3
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 1.0e-94 350.9 346 54.0
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 1.3e-94 350.5 285 58.6
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 1.7e-94 350.1 304 57.2
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 3.0e-94 349.4 302 56.0
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 3.9e-94 349.0 289 57.8
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 5.1e-94 348.6 287 56.8
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 5.1e-94 348.6 308 56.8
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 6.6e-94 348.2 289 56.7
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 8.6e-94 347.8 288 59.0
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 1.1e-93 347.4 298 54.7
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 1.1e-93 347.4 319 55.5
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.5e-93 347.1 315 53.7
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 1.9e-93 346.7 280 59.3
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 3.3e-93 345.9 322 55.6
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 3.3e-93 345.9 255 61.2
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 6.2e-92 341.7 257 63.4
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 8.1e-92 341.3 288 56.9
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 8.1e-92 341.3 298 55.7
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 8.9e-91 337.8 299 55.2
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 2.0e-90 336.7 315 52.7
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 1.7e-89 333.6 235 67.2
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 3.2e-88 329.3 358 48.6
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 4.2e-88 328.9 289 53.6
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 5.4e-88 328.6 297 54.2
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 5.4e-88 328.6 297 54.2
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 5.4e-88 328.6 311 54.0
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 7.1e-88 328.2 310 53.2
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 9.3e-88 327.8 291 55.3
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 1.6e-87 327.0 210 72.4
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 1.3e-86 323.9 259 59.8
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 2.5e-85 319.7 317 52.4
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 5.6e-85 318.5 273 59.0
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 5.6e-85 318.5 294 54.8
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 7.3e-85 318.2 273 59.0
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 9.0e-83 311.2 261 55.2
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 7.6e-82 308.1 274 58.4
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 2.3e-70 270.0 320 44.1
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 3.9e-70 269.2 268 53.0
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 1.8e-67 260.4 291 47.8
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 3.1e-67 259.6 206 59.2
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 1.7e-49 200.7 141 66.7
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 2.0e-45 187.2 300 39.7
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 4.1e-43 179.5 132 59.1
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 2.2e-41 173.7 140 62.1
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 3.0e-38 163.3 125 54.4
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 1.7e-33 147.5 124 58.1
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 6.1e-31 139.0 236 33.9
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 1.1e-27 128.3 255 33.3
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 1.8e-27 127.5 116 54.3
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 3.5e-26 123.2 86 66.3
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 1.0e-25 121.7 86 65.1
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 1.6e-23 114.4 86 61.6
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 4.0e-22 109.8 141 41.1
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 2.7e-15 87.0 102 47.1
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 5.2e-14 82.8 72 52.8
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 7.5e-13 79.0 64 59.4
Dinv32677 Davidia involucrata HOM05D006737 ORTHO05D008418 4.5e-10 69.7 53 56.6
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 2.8e-07 60.5 38 76.3
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 6.1e-07 59.3 38 73.7
Cre01.g055469 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 1.8e-06 57.8 140 26.4


User provided reference genes

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