Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 3.4e-281 971.1 509 100.0
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 4.1e-130 469.2 488 53.5
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 8.6e-128 461.5 556 48.6
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 2.8e-118 429.9 574 45.8
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 5.6e-95 352.4 514 43.4
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 1.3e-91 341.3 496 45.8
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 7.9e-89 332.0 522 44.1
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 3.3e-87 326.6 509 41.8
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 3.7e-86 323.2 501 43.5
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 6.3e-86 322.4 512 41.4
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 2.7e-81 307.0 485 43.1
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 1.0e-80 305.1 447 43.2
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.7e-75 287.7 527 36.6
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 6.5e-75 285.8 535 37.8
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 2.7e-73 280.4 512 38.5
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 1.5e-71 274.6 517 38.3
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 2.6e-71 273.9 532 39.5
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.4e-69 268.1 527 35.7
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 2.4e-69 267.3 373 44.5
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 1.2e-68 265.0 333 48.3
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 1.7e-67 261.2 521 38.8
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 1.2e-65 255.0 516 37.6
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 1.6e-65 254.6 505 37.8
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 2.6e-63 247.3 395 42.0
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 1.1e-61 241.9 518 36.1
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 3.8e-59 233.4 448 36.6
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 8.5e-59 232.3 520 35.4
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 7.2e-58 229.2 353 39.7
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 1.6e-57 228.0 238 52.9
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 4.0e-56 223.4 511 35.0
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 3.4e-55 220.3 517 33.1
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 1.1e-53 215.3 523 33.3
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 1.1e-53 215.3 464 35.6
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 1.7e-51 208.0 515 34.6
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 5.0e-51 206.5 524 33.8
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 1.5e-50 204.9 514 33.7
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 5.5e-50 203.0 421 37.5
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 1.2e-49 201.8 514 31.7
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 1.6e-49 201.4 518 34.2
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 4.7e-49 199.9 509 33.8
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 3.0e-48 197.2 523 35.2
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 4.0e-48 196.8 298 41.6
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 6.8e-48 196.1 522 32.8
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 4.4e-47 193.4 516 32.0
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 7.5e-47 192.6 509 33.2
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 9.8e-47 192.2 507 30.0
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 1.1e-45 188.7 505 33.3
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 1.4e-45 188.3 516 32.0
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 5.4e-45 186.4 388 37.4
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 5.4e-45 186.4 398 35.7
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 3.5e-44 183.7 502 32.3
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 1.1e-42 178.7 475 35.2
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 1.9e-42 177.9 326 38.7
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 1.2e-41 175.3 521 32.2
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 2.1e-41 174.5 365 34.5
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 3.6e-41 173.7 439 33.7
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 5.2e-40 169.9 298 41.3
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 5.2e-40 169.9 517 32.1
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 8.9e-40 169.1 538 33.3
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 8.9e-40 169.1 508 30.5
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 3.4e-39 167.2 523 31.2
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 1.7e-38 164.9 371 34.0
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 6.3e-38 162.9 486 29.0
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 1.4e-37 161.8 516 29.5
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 1.8e-37 161.4 386 35.5
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 7.8e-36 156.0 414 34.3
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 4.3e-34 150.2 519 29.3
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 2.8e-33 147.5 515 28.7
AT1G02960 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 1.0e-32 145.6 431 32.9
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 1.0e-32 145.6 491 28.9
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 1.0e-32 145.6 192 46.4
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 3.1e-32 144.1 192 42.2
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 6.8e-32 142.9 411 33.8
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 5.4e-29 133.3 374 30.2
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 1.7e-27 128.3 368 31.2
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 1.7e-27 128.3 414 30.7
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 6.6e-27 126.3 453 28.7
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 1.5e-26 125.2 399 31.1
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 1.9e-26 124.8 442 31.0
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 5.6e-26 123.2 190 41.1
CSS0046769 Camellia sinensis var. sinensis HOM05D007164 ORTHO05D008802 2.8e-25 120.9 334 33.2
MELO3C019559.2 Cucumis melo HOM05D007164 ORTHO05D008802 4.7e-25 120.2 257 37.4
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 1.1e-24 119.0 193 37.8
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 4.0e-24 117.1 165 45.5
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 8.9e-24 115.9 165 39.4
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 7.1e-21 106.3 336 30.7
DCAR_005809 Daucus carota HOM05D007164 ORTHO05D008802 4.6e-20 103.6 265 34.7
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 4.6e-20 103.6 504 27.4
Nitab4.5_0005474g0060 Nicotiana tabacum HOM05D000498 ORTHO05D000354 7.8e-20 102.8 482 28.4
Solyc09g074840.4 Solanum lycopersicum HOM05D007164 ORTHO05D008802 3.0e-19 100.9 468 27.6
ATR0691G271 Amborella trichopoda HOM05D007164 ORTHO05D008802 1.6e-17 95.1 171 36.3
Ca_07266_v3 Cicer arietinum L. HOM05D007164 ORTHO05D008802 1.1e-16 92.4 164 39.0
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 1.1e-16 92.4 448 28.1
HanXRQChr10g0283981 Helianthus annuus HOM05D007164 ORTHO05D008802 1.8e-16 91.7 91 49.5
Peaxi162Scf00067g02422 Petunia axillaris HOM05D007164 ORTHO05D008802 2.3e-16 91.3 351 28.8
CiPaw.07G104400 Carya illinoinensis HOM05D007164 ORTHO05D008802 6.8e-16 89.7 191 39.8
EL10Ac7g17490 Beta vulgaris HOM05D007164 ORTHO05D008802 7.6e-15 86.3 358 28.8
Duzib138G1663 Durio zibethinus HOM05D007164 ORTHO05D008802 5.4e-13 80.1 185 35.1
AagrBONN_evm.TU.Sc2ySwM_117.3923 Anthoceros agrestis HOM05D007164 ORTHO05D008802 7.1e-13 79.7 158 32.3
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 1.7e-11 75.1 104 41.3
SEGI_29739 Sequoiadendron giganteum HOM05D007164 ORTHO05D008802 5.1e-11 73.6 109 34.9
Pp3c3_15490 Physcomitrium patens HOM05D007164 ORTHO05D008802 1.6e-09 68.6 150 29.3
Mapoly0046s0035 Marchantia polymorpha HOM05D007164 ORTHO05D008802 2.1e-09 68.2 167 26.9
BcaB06g26239 Brassica carinata HOM05D007164 ORTHO05D008802 4.4e-07 60.5 104 36.5
Zm00001eb133720 Zea mays HOM05D000144 ORTHO05D008802 6.4e-06 56.6 89 39.3


User provided reference genes

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