Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G212700 Manihot esculenta HOM05D009515 ORTHO05D010550 3.5e-52 208.4 134 100.0
Manes.05G069200 Manihot esculenta HOM05D009515 ORTHO05D010550 2.6e-31 139.0 145 62.8
Potri.014G135560 Populus trichocarpa HOM05D009515 ORTHO05D010550 2.1e-17 92.8 135 51.1
Sabra14G0101700 Salix brachista HOM05D009515 ORTHO05D010550 4.9e-14 81.6 134 44.8
Potri.002G213900 Populus trichocarpa HOM05D009515 ORTHO05D010550 2.7e-12 75.9 136 58.8
Duzib133G0496 Durio zibethinus HOM05D009515 ORTHO05D010550 1.3e-11 73.6 144 45.1
TAR633G2431 Trochodendron aralioides HOM05D012100 ORTHO05D010550 8.6e-11 70.9 132 53.8
TAR633G2812 Trochodendron aralioides HOM05D012100 ORTHO05D010550 1.1e-10 70.5 128 50.0
Glyma.19G205600 Glycine max HOM05D010368 ORTHO05D012190 2.5e-10 69.3 114 41.2
Duzib138G0019 Durio zibethinus HOM05D009515 ORTHO05D010550 5.6e-10 68.2 143 40.6
QL12p023816 Quercus lobata HOM05D012100 ORTHO05D010550 7.3e-10 67.8 159 42.1
Gohir.D08G079900 Gossypium hirsutum HOM05D009515 ORTHO05D010550 9.6e-10 67.4 134 38.1
Gorai.004G084900 Gossypium raimondii HOM05D009515 ORTHO05D010550 9.6e-10 67.4 134 38.1
Hma1.2p1_0209F.1_g089180 Hydrangea macrophylla HOM05D009515 ORTHO05D010550 9.6e-10 67.4 133 43.6
Duzib211G0224 Durio zibethinus HOM05D009515 ORTHO05D010550 1.2e-09 67.0 148 39.9
Glyma.03G208400 Glycine max HOM05D010368 ORTHO05D012190 1.6e-09 66.6 126 51.6
PGR044G1294 Punica granatum HOM05D057725 ORTHO05D010550 1.6e-09 66.6 140 36.4
PGR088G0005 Punica granatum HOM05D057725 ORTHO05D010550 1.6e-09 66.6 140 36.4
Thecc.01G289300 Theobroma cacao HOM05D009515 ORTHO05D010550 3.6e-09 65.5 142 38.7
Gohir.D08G136800 Gossypium hirsutum HOM05D009515 ORTHO05D010550 8.1e-09 64.3 147 39.5
TAR365G0883 Trochodendron aralioides HOM05D012100 ORTHO05D010550 1.1e-08 63.9 132 37.1
Eucgr.K03430 Eucalyptus grandis HOM05D012100 ORTHO05D010550 1.8e-08 63.2 117 39.3
arahy.Tifrunner.gnm1.ann1.H1EMIC Arachis hypogaea HOM05D010368 ORTHO05D012190 8.9e-08 60.8 135 46.7
Glyma.02G151900 Glycine max HOM05D010368 ORTHO05D012190 8.9e-08 60.8 129 39.5
Gohir.A08G071700 Gossypium hirsutum HOM05D009515 ORTHO05D010550 8.9e-08 60.8 134 35.8
CiPaw.08G100900 Carya illinoinensis HOM05D012100 ORTHO05D010550 1.2e-07 60.5 139 36.0
Cpa.g.sc9.153 Carica papaya HOM05D009515 ORTHO05D010550 2.0e-07 59.7 138 37.7
Prupe.8G251300 Prunus persica HOM05D012100 ORTHO05D010550 2.0e-07 59.7 146 47.9
FAN20G0201 Fragaria x ananassa HOM05D012100 ORTHO05D010550 2.6e-07 59.3 130 39.2
arahy.Tifrunner.gnm1.ann1.Q37X17 Arachis hypogaea HOM05D010368 ORTHO05D012190 3.4e-07 58.9 135 44.4
FvH4_2g24610 Fragaria vesca HOM05D012100 ORTHO05D010550 3.4e-07 58.9 135 40.7
FAN24G2924 Fragaria x ananassa HOM05D012100 ORTHO05D010550 3.4e-07 58.9 135 40.7
FAN27G3336 Fragaria x ananassa HOM05D012100 ORTHO05D010550 3.4e-07 58.9 133 43.6
Gohir.A08G116000 Gossypium hirsutum HOM05D009515 ORTHO05D010550 3.4e-07 58.9 146 39.7
CSS0013047 Camellia sinensis var. sinensis HOM05D009515 ORTHO05D010550 1.3e-06 57.0 145 34.5
FAN15G1158 Fragaria x ananassa HOM05D012100 ORTHO05D010550 1.7e-06 56.6 137 46.0
Atru.chr5.1291 Acer truncatum HOM05D009515 ORTHO05D010550 2.2e-06 56.2 158 32.3
Phvul.001G201500 Phaseolus vulgaris HOM05D010368 ORTHO05D012190 2.2e-06 56.2 129 34.1
Lj1g0028076 Lotus japonicus HOM05D010368 ORTHO05D012190 6.4e-06 54.7 115 38.3


User provided reference genes

Program Settings