Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G209300 Manihot esculenta HOM05D005179 ORTHO05D006225 2.1e-97 359.4 235 100.0
Manes.05G074000 Manihot esculenta HOM05D005179 ORTHO05D006225 6.1e-36 155.2 209 66.0
Ciclev10024447m.g Citrus clementina HOM05D005179 ORTHO05D006225 3.8e-22 109.4 204 41.2
TWI59G0379 Tripterygium wilfordii HOM05D005179 ORTHO05D006225 4.0e-19 99.4 205 55.6
Thecc.01G282700 Theobroma cacao HOM05D005179 ORTHO05D006225 1.3e-17 94.4 196 38.8
TWI59G1208 Tripterygium wilfordii HOM05D005179 ORTHO05D006225 2.9e-17 93.2 197 34.0
CANSAT25G0479 Cannabis sativa HOM05D005179 ORTHO05D006225 8.3e-17 91.7 203 37.4
Atru.chr5.1383 Acer truncatum HOM05D005179 ORTHO05D006225 1.2e-15 87.8 207 37.7
Lj5g0012316 Lotus japonicus HOM05D005179 ORTHO05D006225 1.2e-15 87.8 192 34.9
CSS0035012 Camellia sinensis var. sinensis HOM05D005179 ORTHO05D006225 3.5e-15 86.3 186 48.4
FAN20G2888 Fragaria x ananassa HOM05D005179 ORTHO05D006225 4.6e-15 85.9 191 47.1
Potri.002G215200 Populus trichocarpa HOM05D005179 ORTHO05D006225 4.6e-15 85.9 192 33.3
Prupe.8G243700 Prunus persica HOM05D005179 ORTHO05D006225 4.6e-15 85.9 192 53.1
COL.COLO4_09131 Corchorus olitorius HOM05D005179 ORTHO05D006225 5.9e-15 85.5 51 64.7
Phvul.001G149300 Phaseolus vulgaris HOM05D005179 ORTHO05D006225 7.8e-15 85.1 199 37.2
Sc24g0004150 Simmondsia chinensis HOM05D005179 ORTHO05D006225 7.8e-15 85.1 169 37.3
Ca_08572_v3 Cicer arietinum L. HOM05D005179 ORTHO05D006225 1.0e-14 84.7 182 44.0
Dinv11251 Davidia involucrata HOM05D005179 ORTHO05D006225 1.0e-14 84.7 164 38.4
Glyma.19G154300 Glycine max HOM05D005179 ORTHO05D006225 1.0e-14 84.7 199 37.2
Potri.014G139100 Populus trichocarpa HOM05D005179 ORTHO05D006225 1.3e-14 84.3 50 64.0
MSTRG.21570 Avicennia marina HOM05D005179 ORTHO05D006225 3.0e-14 83.2 202 35.1
CARHR173410 Cardamine hirsuta HOM05D005179 ORTHO05D006225 3.0e-14 83.2 51 58.8
Potri.014G139200 Populus trichocarpa HOM05D005179 ORTHO05D006225 5.0e-14 82.4 191 37.2
Rhsim13G0023300 Rhododendron simsii HOM05D005179 ORTHO05D006225 5.0e-14 82.4 194 37.1
Sabra02G0167400 Salix brachista HOM05D005179 ORTHO05D006225 6.6e-14 82.0 199 33.2
Hma1.2p1_0628F.1_g191965 Hydrangea macrophylla HOM05D005179 ORTHO05D006225 8.6e-14 81.6 203 46.3
RcHm_v2.0_Chr6g0291441 Rosa chinensis HOM05D005179 ORTHO05D006225 8.6e-14 81.6 196 48.0
Migut.D00272 Erythranthe guttata HOM05D005179 ORTHO05D006225 1.1e-13 81.3 195 49.7
Eucgr.K03387 Eucalyptus grandis HOM05D005179 ORTHO05D006225 1.1e-13 81.3 50 60.0
Carub.0005s2976 Capsella rubella HOM05D005179 ORTHO05D006225 1.5e-13 80.9 51 54.9
Medtr7g094650 Medicago truncatula HOM05D005179 ORTHO05D006225 1.9e-13 80.5 210 36.2
Potri.004G022700 Populus trichocarpa HOM05D005179 ORTHO05D006225 2.5e-13 80.1 190 31.6
Aqoxy2G03259 Aquilegia oxysepala HOM05D005179 ORTHO05D006225 3.3e-13 79.7 50 60.0
FAN27G1844 Fragaria x ananassa HOM05D005179 ORTHO05D006225 3.3e-13 79.7 218 46.3
Nitab4.5_0001028g0210 Nicotiana tabacum HOM05D005179 ORTHO05D006225 3.3e-13 79.7 200 29.0
VMungo0720G0860 Vigna mungo HOM05D005179 ORTHO05D006225 3.3e-13 79.7 190 31.6
A07p26240 Brassica napus HOM05D005179 ORTHO05D006225 4.3e-13 79.3 50 56.0
C06p28620 Brassica napus HOM05D005179 ORTHO05D006225 4.3e-13 79.3 50 56.0
BolC6t38030H Brassica oleracea HOM05D005179 ORTHO05D006225 4.3e-13 79.3 50 56.0
BraA07t30267Z Brassica rapa HOM05D005179 ORTHO05D006225 4.3e-13 79.3 50 56.0
C08p37810 Brassica napus HOM05D000257 ORTHO05D009070 5.6e-13 79.0 51 52.9
BolC8t51360H Brassica oleracea HOM05D000257 ORTHO05D009070 5.6e-13 79.0 51 52.9
Cpa.g.sc64.166 Carica papaya HOM05D005179 ORTHO05D006225 5.6e-13 79.0 50 60.0
Dinv32955 Davidia involucrata HOM05D005179 ORTHO05D006225 5.6e-13 79.0 192 37.5
Oeu015958.1 Olea europaea HOM05D005179 ORTHO05D006225 5.6e-13 79.0 195 34.4
Solyc09g064900.1 Solanum lycopersicum HOM05D005179 ORTHO05D006225 5.6e-13 79.0 49 61.2
AL5G45930 Arabidopsis lyrata HOM05D005179 ORTHO05D006225 7.3e-13 78.6 50 54.0
AT3G63095 Arabidopsis thaliana HOM05D005179 ORTHO05D006225 7.3e-13 78.6 50 54.0
A09p54910 Brassica napus HOM05D000257 ORTHO05D009070 7.3e-13 78.6 51 52.9
BraA09t40901Z Brassica rapa HOM05D000257 ORTHO05D009070 7.3e-13 78.6 51 52.9
CAN.G609.9 Capsicum annuum HOM05D005179 ORTHO05D006225 7.3e-13 78.6 53 56.6
Glyma.03G151700 Glycine max HOM05D005179 ORTHO05D006225 7.3e-13 78.6 194 36.1
Sopen09g026600 Solanum pennellii HOM05D005179 ORTHO05D006225 9.5e-13 78.2 49 61.2
THA.LOC104817549 Tarenaya hassleriana HOM05D005179 ORTHO05D006225 9.5e-13 78.2 51 52.9
FvH4_2g23841 Fragaria vesca HOM05D005179 ORTHO05D006225 1.2e-12 77.8 222 46.4
Psat6g061040 Pisum sativum HOM05D005179 ORTHO05D006225 1.2e-12 77.8 165 33.3
GSVIVG01011106001 Vitis vinifera HOM05D005179 ORTHO05D006225 1.2e-12 77.8 49 59.2
Duzib138G1054 Durio zibethinus HOM05D005179 ORTHO05D006225 1.6e-12 77.4 202 35.6
Medtr1g032050 Medicago truncatula HOM05D005179 ORTHO05D006225 1.6e-12 77.4 202 30.2
Medtr1g032400 Medicago truncatula HOM05D005179 ORTHO05D006225 1.6e-12 77.4 202 30.2
Sabra14G0104900 Salix brachista HOM05D005179 ORTHO05D006225 1.6e-12 77.4 193 42.0
MD11G1289000 Malus domestica HOM05D000257 ORTHO05D009070 2.1e-12 77.0 179 35.8
TPR.G1598 Trifolium pratense HOM05D005179 ORTHO05D006225 2.1e-12 77.0 48 56.2
A04p00290 Brassica napus HOM05D005179 ORTHO05D006225 2.8e-12 76.6 51 52.9
C04p30120 Brassica napus HOM05D005179 ORTHO05D006225 2.8e-12 76.6 51 52.9
BolC4t24544H Brassica oleracea HOM05D005179 ORTHO05D006225 2.8e-12 76.6 51 52.9
BraA04t15748Z Brassica rapa HOM05D005179 ORTHO05D006225 2.8e-12 76.6 51 52.9
DCAR_018411 Daucus carota HOM05D005179 ORTHO05D006225 2.8e-12 76.6 208 38.0
Sc05g0004870 Simmondsia chinensis HOM05D005179 ORTHO05D006225 2.8e-12 76.6 167 38.9
Phvul.007G170000 Phaseolus vulgaris HOM05D005179 ORTHO05D006225 4.7e-12 75.9 48 54.2
FAN24G3244 Fragaria x ananassa HOM05D005179 ORTHO05D006225 8.0e-12 75.1 46 56.5
THA.LOC104802228 Tarenaya hassleriana HOM05D005179 ORTHO05D006225 8.0e-12 75.1 203 45.3
ECA247G2094 Erigeron canadensis HOM05D005179 ORTHO05D006225 1.0e-11 74.7 49 53.1
Gohir.A11G121400 Gossypium hirsutum HOM05D005179 ORTHO05D006225 1.0e-11 74.7 198 34.3
Lsat_1_v5_gn_1_29921 Lactuca sativa HOM05D005179 ORTHO05D006225 1.4e-11 74.3 200 47.5
Manes.05G074200 Manihot esculenta HOM05D005179 ORTHO05D006225 1.4e-11 74.3 54 51.9
Nitab4.5_0002386g0020 Nicotiana tabacum HOM05D005179 ORTHO05D006225 1.4e-11 74.3 49 53.1
PGR044G1538 Punica granatum HOM05D005179 ORTHO05D006225 1.4e-11 74.3 171 37.4
Aa31LG10G16940 Aethionema arabicum HOM05D005179 ORTHO05D006225 1.8e-11 73.9 49 51.0
Glyma.10G025200 Glycine max HOM05D005179 ORTHO05D006225 1.8e-11 73.9 207 33.8
Gohir.D08G077600 Gossypium hirsutum HOM05D005179 ORTHO05D006225 1.8e-11 73.9 207 34.8
Ca_09769_v3 Cicer arietinum L. HOM05D005179 ORTHO05D006225 3.1e-11 73.2 48 56.2
FAN15G0349 Fragaria x ananassa HOM05D005179 ORTHO05D006225 3.1e-11 73.2 221 45.2
FAN15G1538 Fragaria x ananassa HOM05D005179 ORTHO05D006225 3.1e-11 73.2 221 45.2
Psat3g065120 Pisum sativum HOM05D005179 ORTHO05D006225 3.1e-11 73.2 48 58.3
Lalb_Chr21g0306521 Lupinus albus HOM05D005179 ORTHO05D006225 4.0e-11 72.8 186 33.3
TAR636G3147 Trochodendron aralioides HOM05D005179 ORTHO05D006225 4.0e-11 72.8 198 43.4
VMungo1383G3409 Vigna mungo HOM05D005179 ORTHO05D006225 4.0e-11 72.8 46 58.7
arahy.Tifrunner.gnm1.ann1.AZF37F Arachis hypogaea HOM05D000257 ORTHO05D009070 5.2e-11 72.4 48 54.2
Ah.08g213000 Amaranthus hybridus HOM05D005179 ORTHO05D006225 6.8e-11 72.0 206 33.5
Cc01_g19710 Coffea canephora HOM05D005179 ORTHO05D006225 6.8e-11 72.0 50 52.0
Haze_04736 Corylus avellana HOM05D005179 ORTHO05D006225 6.8e-11 72.0 204 33.3
unitig_8.g3720 Utricularia gibba HOM05D005179 ORTHO05D006225 6.8e-11 72.0 193 33.7
Aqoxy5G00531 Aquilegia oxysepala HOM05D001530 ORTHO05D003676 8.9e-11 71.6 50 50.0
Gohir.A08G069300 Gossypium hirsutum HOM05D005179 ORTHO05D006225 8.9e-11 71.6 206 43.7
Gorai.007G135300 Gossypium raimondii HOM05D005179 ORTHO05D006225 8.9e-11 71.6 199 34.2
Lalb_Chr01g0020211 Lupinus albus HOM05D005179 ORTHO05D006225 8.9e-11 71.6 193 42.0
Manes.01G209200 Manihot esculenta HOM05D005179 ORTHO05D006225 8.9e-11 71.6 54 50.0
Ah.15g091740 Amaranthus hybridus HOM05D005179 ORTHO05D006225 1.2e-10 71.2 166 40.4
Gohir.D08G077500 Gossypium hirsutum HOM05D005179 ORTHO05D006225 1.2e-10 71.2 49 53.1
Gorai.004G082400 Gossypium raimondii HOM05D005179 ORTHO05D006225 1.2e-10 71.2 49 53.1
SGA_v2.0_scaffold11G05800 Striga asiatica HOM05D005179 ORTHO05D006225 1.2e-10 71.2 53 52.8
MSTRG.18220 Avicennia marina HOM05D005179 ORTHO05D006225 1.5e-10 70.9 198 29.8
Glyma.02G148700 Glycine max HOM05D005179 ORTHO05D006225 2.0e-10 70.5 205 33.7
Gohir.D11G126500 Gossypium hirsutum HOM05D005179 ORTHO05D006225 2.0e-10 70.5 199 34.2
Zm00001eb017420 Zea mays HOM05D005179 ORTHO05D006225 2.0e-10 70.5 48 56.2
MD03G1268100 Malus domestica HOM05D005179 ORTHO05D006225 3.4e-10 69.7 166 35.5
Gorai.004G082500 Gossypium raimondii HOM05D005179 ORTHO05D006225 4.4e-10 69.3 207 31.9
Lalb_Chr25g0290231 Lupinus albus HOM05D005179 ORTHO05D006225 4.4e-10 69.3 200 46.5
Nn4g26188 Nelumbo nucifera HOM05D005179 ORTHO05D006225 4.4e-10 69.3 51 47.1
SalBow6G3683 Salvia bowleyana HOM05D005179 ORTHO05D006225 5.8e-10 68.9 164 34.1
DCAR_002746 Daucus carota HOM05D005179 ORTHO05D006225 7.5e-10 68.6 50 50.0
Os03g0357500 Oryza sativa ssp. japonica HOM05D005179 ORTHO05D006225 7.5e-10 68.6 48 54.2
Rhsim01G0275800 Rhododendron simsii HOM05D000756 ORTHO05D000604 9.8e-10 68.2 162 45.1
Cfa006114 Carpinus fangiana HOM05D005179 ORTHO05D006225 1.3e-09 67.8 55 47.3
CiPaw.07G093600 Carya illinoinensis HOM05D005179 ORTHO05D006225 1.3e-09 67.8 203 33.0
CsaV3_7G028640 Cucumis sativus L. HOM05D005179 ORTHO05D006225 1.3e-09 67.8 162 32.7
Actinidia21103 Actinidia chinensis HOM05D000756 ORTHO05D000604 2.2e-09 67.0 47 51.1
Nn1g02158 Nelumbo nucifera HOM05D005179 ORTHO05D006225 2.2e-09 67.0 50 46.0
Zm00001eb394420 Zea mays HOM05D005179 ORTHO05D006225 2.2e-09 67.0 48 52.1
CiPaw.08G103900 Carya illinoinensis HOM05D005179 ORTHO05D006225 2.9e-09 66.6 217 31.8
HanXRQChr15g0466391 Helianthus annuus HOM05D005179 ORTHO05D006225 2.9e-09 66.6 45 48.9
ClCG09G006920 Citrullus lanatus HOM05D000257 ORTHO05D009070 3.7e-09 66.2 48 45.8
PSO832G0665 Papaver somniferum HOM05D005179 ORTHO05D006225 3.7e-09 66.2 186 44.1
PSO210G2426 Papaver somniferum HOM05D005179 ORTHO05D006225 4.9e-09 65.9 51 45.1
PSO447G0321 Papaver somniferum HOM05D005179 ORTHO05D006225 4.9e-09 65.9 51 45.1
SalBow4G1980 Salvia bowleyana HOM05D005179 ORTHO05D006225 4.9e-09 65.9 206 31.1
arahy.Tifrunner.gnm1.ann1.YN028F Arachis hypogaea HOM05D000257 ORTHO05D009070 6.4e-09 65.5 209 37.3
Lj1g0021337 Lotus japonicus HOM05D005179 ORTHO05D006225 6.4e-09 65.5 197 33.5
PSO210G7214 Papaver somniferum HOM05D005179 ORTHO05D006225 6.4e-09 65.5 186 43.5
ClCG07G000210 Citrullus lanatus HOM05D005179 ORTHO05D006225 8.3e-09 65.1 49 46.9
Os07g0655800 Oryza sativa ssp. japonica HOM05D005179 ORTHO05D006225 1.1e-08 64.7 48 50.0
ECA236G2709 Erigeron canadensis HOM05D005179 ORTHO05D006225 1.4e-08 64.3 45 53.3
Gohir.A08G069200 Gossypium hirsutum HOM05D005179 ORTHO05D006225 1.4e-08 64.3 52 50.0
Zm00001eb329500 Zea mays HOM05D005179 ORTHO05D006225 1.4e-08 64.3 48 47.9
MELO3C015854.2 Cucumis melo HOM05D005179 ORTHO05D006225 1.9e-08 63.9 164 37.2
Sed0002169 Sechium edule HOM05D005179 ORTHO05D006225 1.9e-08 63.9 49 46.9
SGA_v2.0_scaffold258G45766 Striga asiatica HOM05D005179 ORTHO05D006225 1.9e-08 63.9 49 42.9
SGA_v2.0_scaffold80G25940 Striga asiatica HOM05D005179 ORTHO05D006225 4.1e-08 62.8 45 51.1
Oeu028081.1 Olea europaea HOM05D005179 ORTHO05D006225 9.2e-08 61.6 51 45.1
Gohir.D12G005300 Gossypium hirsutum HOM05D005179 ORTHO05D006225 1.2e-07 61.2 189 28.0
Gorai.008G005200 Gossypium raimondii HOM05D005179 ORTHO05D006225 1.2e-07 61.2 189 28.0
ATR0626G310 Amborella trichopoda HOM05D005179 ORTHO05D006225 1.6e-07 60.8 46 52.2
Sopen02g023170 Solanum pennellii HOM05D005179 ORTHO05D006225 1.6e-07 60.8 161 32.9
Gorai.009G014800 Gossypium raimondii HOM05D005179 ORTHO05D006225 2.7e-07 60.1 189 27.5
Gohir.A12G005800 Gossypium hirsutum HOM05D005179 ORTHO05D006225 3.5e-07 59.7 189 27.5
Sed0008870 Sechium edule HOM05D005179 ORTHO05D006225 4.6e-07 59.3 162 30.2
Actinidia00740 Actinidia chinensis HOM05D005179 ORTHO05D006225 6.0e-07 58.9 44 45.5
PGSC0003DMG400020123 Solanum tuberosum HOM05D005179 ORTHO05D006225 6.0e-07 58.9 160 33.8
Sed0008634 Sechium edule HOM05D005179 ORTHO05D006225 7.8e-07 58.5 48 37.5
Migut.N02158 Erythranthe guttata HOM05D005179 ORTHO05D006225 1.0e-06 58.2 51 43.1


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