Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G198240 Manihot esculenta HOM05D008443 ORTHO05D010587 1.6e-63 246.1 144 100.0
Manes.05G088700 Manihot esculenta HOM05D008443 ORTHO05D010587 3.5e-26 122.1 75 82.7
QL03p061920 Quercus lobata HOM05D008443 ORTHO05D010587 1.6e-23 113.2 72 75.0
Gohir.A03G141200 Gossypium hirsutum HOM05D008443 ORTHO05D010587 1.1e-19 100.5 82 64.6
CSS0001689 Camellia sinensis var. sinensis HOM05D008443 ORTHO05D010587 2.4e-19 99.4 80 68.8
Duzib268G1406 Durio zibethinus HOM05D008443 ORTHO05D010587 2.4e-19 99.4 76 69.7
Gohir.A05G318400 Gossypium hirsutum HOM05D008443 ORTHO05D010587 9.3e-19 97.4 78 66.7
Gorai.005G184100 Gossypium raimondii HOM05D008443 ORTHO05D010587 9.3e-19 97.4 78 65.4
CiPaw.05G147800 Carya illinoinensis HOM05D008443 ORTHO05D010587 2.7e-18 95.9 71 77.5
Aqoxy3G03049 Aquilegia oxysepala HOM05D008443 ORTHO05D010587 3.5e-18 95.5 60 76.7
Gohir.D02G164100 Gossypium hirsutum HOM05D008443 ORTHO05D010587 6.0e-18 94.7 82 62.2
Nn3g16936 Nelumbo nucifera HOM05D008443 ORTHO05D010587 7.8e-18 94.4 62 77.4
CANSAT01G1518 Cannabis sativa HOM05D008443 ORTHO05D010587 5.1e-17 91.7 67 76.1
Gohir.D05G320600 Gossypium hirsutum HOM05D008443 ORTHO05D010587 1.1e-16 90.5 81 59.3
TAR629G3213 Trochodendron aralioides HOM05D008443 ORTHO05D010587 1.1e-16 90.5 71 64.8
Gorai.009G343700 Gossypium raimondii HOM05D008443 ORTHO05D010587 1.5e-16 90.1 82 57.3
ClCG05G025160 Citrullus lanatus HOM05D008443 ORTHO05D010587 2.5e-16 89.4 78 62.8
MBI15_g19742_MAGBIO Magnolia biondii HOM05D008443 ORTHO05D010587 5.6e-16 88.2 59 74.6
Eucgr.B03356 Eucalyptus grandis HOM05D008443 ORTHO05D010587 1.6e-15 86.7 49 87.8
Phvul.003G053700 Phaseolus vulgaris HOM05D008443 ORTHO05D010587 2.1e-15 86.3 69 59.4
TPR.G35976 Trifolium pratense HOM05D008443 ORTHO05D010587 1.4e-14 83.6 69 63.8
Glyma.18G135000 Glycine max HOM05D008443 ORTHO05D010587 1.8e-14 83.2 69 60.9
MD16G1089300 Malus domestica HOM05D008443 ORTHO05D010587 2.4e-14 82.8 52 80.8
Glyma.08G289300 Glycine max HOM05D008443 ORTHO05D010587 3.1e-14 82.4 70 60.0
TWI36G1347 Tripterygium wilfordii HOM05D008443 ORTHO05D010587 4.0e-14 82.0 67 70.1
Prupe.1G256700 Prunus persica HOM05D008443 ORTHO05D010587 5.3e-14 81.6 52 78.8
Lalb_Chr16g0382381 Lupinus albus HOM05D008443 ORTHO05D010587 1.5e-13 80.1 74 56.8
CsaV3_5G031740 Cucumis sativus L. HOM05D008443 ORTHO05D010587 2.6e-13 79.3 71 60.6
PGR102G0936 Punica granatum HOM05D008443 ORTHO05D010587 2.6e-13 79.3 69 66.7
MELO3C012013.2 Cucumis melo HOM05D008443 ORTHO05D010587 4.5e-13 78.6 73 58.9
Dinv31086 Davidia involucrata HOM05D000086 ORTHO05D000983 5.8e-13 78.2 61 65.6
Rhsim12G0048000 Rhododendron simsii HOM05D008443 ORTHO05D010587 5.8e-13 78.2 73 60.3
VMungo0251G0489 Vigna mungo HOM05D008443 ORTHO05D010587 5.8e-13 78.2 71 54.9
MD13G1089100 Malus domestica HOM05D008443 ORTHO05D010587 7.6e-13 77.8 52 76.9
FAN17G0561 Fragaria x ananassa HOM05D008443 ORTHO05D010587 2.9e-12 75.9 50 72.0
FAN22G1825 Fragaria x ananassa HOM05D008443 ORTHO05D010587 2.9e-12 75.9 50 72.0
Lsat_1_v5_gn_3_47940 Lactuca sativa HOM05D008443 ORTHO05D010587 6.4e-12 74.7 65 61.5
RcHm_v2.0_Chr4g0444191 Rosa chinensis HOM05D008443 ORTHO05D010587 8.4e-12 74.3 50 72.0
Dinv24885 Davidia involucrata HOM05D000086 ORTHO05D000983 3.2e-11 72.4 48 72.9
Sc11g0001310 Simmondsia chinensis HOM05D008443 ORTHO05D010587 4.2e-11 72.0 69 56.5
Medtr8g063410 Medicago truncatula HOM05D008443 ORTHO05D010587 2.1e-10 69.7 68 51.5
MSTRG.2385 Avicennia marina HOM05D008443 ORTHO05D010587 3.5e-10 68.9 66 59.1
CDE07G0196 Ceratophyllum demersum HOM05D008443 ORTHO05D010587 3.5e-10 68.9 53 66.0
ATR1149G093 Amborella trichopoda HOM05D008443 ORTHO05D010587 7.9e-10 67.8 51 58.8
Haze_07480 Corylus avellana HOM05D008443 ORTHO05D010587 7.9e-10 67.8 61 52.5
Lj2g0011197 Lotus japonicus HOM05D008443 ORTHO05D010587 7.9e-10 67.8 78 46.2
AUR62013990 Chenopodium quinoa HOM05D008443 ORTHO05D010587 1.0e-09 67.4 64 59.4
Cfa019086 Carpinus fangiana HOM05D008443 ORTHO05D010587 2.3e-09 66.2 62 53.2
COL.COLO4_24771 Corchorus olitorius HOM05D008443 ORTHO05D010587 1.5e-08 63.5 71 52.1
DCAR_031087 Daucus carota HOM05D008443 ORTHO05D010587 1.5e-08 63.5 48 72.9
Aa31LG7G7790 Aethionema arabicum HOM05D009339 ORTHO05D011480 9.6e-08 60.8 54 55.6
Thecc.03G007600 Theobroma cacao HOM05D008443 ORTHO05D010587 4.8e-07 58.5 62 51.6
HPP92_010558 Vanilla planifolia HOM05D008443 ORTHO05D010587 1.4e-06 57.0 59 47.5
MBI07_g21782_MAGBIO Magnolia biondii HOM05D006973 ORTHO05D008636 5.3e-06 55.1 49 53.1
MBI07_g41313_MAGBIO Magnolia biondii HOM05D006973 ORTHO05D008636 5.3e-06 55.1 49 53.1
Sed0013077 Sechium edule HOM05D033138 ORTHO05D010587 6.9e-06 54.7 64 46.9
Nn2g12547 Nelumbo nucifera HOM05D011714 ORTHO05D011286 9.0e-06 54.3 58 48.3
THA.LOC109117024 Tarenaya hassleriana HOM05D009339 ORTHO05D011480 9.0e-06 54.3 51 51.0


User provided reference genes

Program Settings