Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G186500 Manihot esculenta HOM05D004641 ORTHO05D005871 9.3e-136 486.9 247 100.0
Thecc.02G351000 Theobroma cacao HOM05D004641 ORTHO05D005871 1.7e-108 396.4 230 87.4
Gorai.013G084700 Gossypium raimondii HOM05D004641 ORTHO05D005871 4.8e-108 394.8 230 85.2
Gohir.A13G074000 Gossypium hirsutum HOM05D004641 ORTHO05D005871 6.3e-108 394.4 230 85.7
Cpa.g.sc128.14 Carica papaya HOM05D004641 ORTHO05D005871 8.2e-108 394.0 229 83.8
Potri.011G083700 Populus trichocarpa HOM05D004641 ORTHO05D005871 5.3e-107 391.3 229 85.6
Duzib268G0036 Durio zibethinus HOM05D004641 ORTHO05D005871 1.2e-106 390.2 230 85.2
Gohir.D13G074100 Gossypium hirsutum HOM05D004641 ORTHO05D005871 1.5e-106 389.8 230 84.3
COL.COLO4_22996 Corchorus olitorius HOM05D004641 ORTHO05D005871 7.7e-106 387.5 230 85.2
PGR102G3009 Punica granatum HOM05D004641 ORTHO05D005871 1.3e-105 386.7 230 83.0
vmacro04307 Vaccinium macrocarpon HOM05D004641 ORTHO05D005871 1.3e-105 386.7 229 80.8
TWI12G0809 Tripterygium wilfordii HOM05D004641 ORTHO05D005871 5.0e-105 384.8 229 82.1
Rhsim07G0243500 Rhododendron simsii HOM05D004641 ORTHO05D005871 1.9e-104 382.9 233 78.5
GSVIVG01020002001 Vitis vinifera HOM05D004641 ORTHO05D005871 1.9e-104 382.9 230 81.7
CSS0000565 Camellia sinensis var. sinensis HOM05D004641 ORTHO05D005871 5.5e-104 381.3 229 80.8
CSS0029182 Camellia sinensis var. sinensis HOM05D004641 ORTHO05D005871 9.4e-104 380.6 229 80.3
CiPaw.06G083900 Carya illinoinensis HOM05D004641 ORTHO05D005871 3.6e-103 378.6 229 82.5
Ciclev10032310m.g Citrus clementina HOM05D004641 ORTHO05D005871 1.4e-102 376.7 229 80.3
Atru.chr11.1801 Acer truncatum HOM05D004641 ORTHO05D005871 3.0e-102 375.6 217 85.3
Actinidia04038 Actinidia chinensis HOM05D004641 ORTHO05D005871 5.2e-102 374.8 231 78.4
CiPaw.05G136500 Carya illinoinensis HOM05D004641 ORTHO05D005871 1.1e-101 373.6 229 81.2
THA.LOC104822117 Tarenaya hassleriana HOM05D004641 ORTHO05D005871 7.4e-101 370.9 229 78.2
QL03p064370 Quercus lobata HOM05D004641 ORTHO05D005871 9.7e-101 370.5 229 81.7
Eucgr.B03435 Eucalyptus grandis HOM05D004641 ORTHO05D005871 1.3e-100 370.2 230 79.6
Lj3A1038G72 Lonicera japonica HOM05D004641 ORTHO05D005871 3.7e-100 368.6 229 79.0
Prupe.1G273100 Prunus persica HOM05D004641 ORTHO05D005871 4.8e-100 368.2 229 79.0
CANSAT64G1560 Cannabis sativa HOM05D004641 ORTHO05D005871 6.3e-100 367.9 231 79.2
Nitab4.5_0000703g0120 Nicotiana tabacum HOM05D004641 ORTHO05D005871 8.2e-100 367.5 232 77.6
Glyma.02G106600 Glycine max HOM05D004641 ORTHO05D005871 1.1e-99 367.1 229 77.7
Peaxi162Scf00541g00527 Petunia axillaris HOM05D004641 ORTHO05D005871 1.4e-99 366.7 232 77.6
Medtr5g040250 Medicago truncatula HOM05D004641 ORTHO05D005871 2.4e-99 365.9 229 77.3
TAR629G2466 Trochodendron aralioides HOM05D004641 ORTHO05D005871 3.1e-99 365.5 226 81.4
VMungo1215G3365 Vigna mungo HOM05D004641 ORTHO05D005871 4.1e-99 365.2 229 77.3
Sabra11G0066400 Salix brachista HOM05D004641 ORTHO05D005871 7.0e-99 364.4 229 81.2
Aa31LG7G8260 Aethionema arabicum HOM05D004641 ORTHO05D005871 9.1e-99 364.0 245 74.3
Medtr7g039370 Medicago truncatula HOM05D004641 ORTHO05D005871 1.2e-98 363.6 229 76.9
Phvul.002G086150 Phaseolus vulgaris HOM05D004641 ORTHO05D005871 1.2e-98 363.6 229 77.3
Ca_24263_v3 Cicer arietinum L. HOM05D004641 ORTHO05D005871 1.6e-98 363.2 229 76.9
Cc11_g13100 Coffea canephora HOM05D004641 ORTHO05D005871 2.0e-98 362.8 229 78.2
TAR622G0412 Trochodendron aralioides HOM05D004641 ORTHO05D005871 4.5e-98 361.7 226 79.6
MSTRG.7808 Avicennia marina HOM05D004641 ORTHO05D005871 7.7e-98 360.9 229 77.7
Lj2g0007835 Lotus japonicus HOM05D004641 ORTHO05D005871 7.7e-98 360.9 232 75.4
Oeu001572.1 Olea europaea HOM05D004641 ORTHO05D005871 7.7e-98 360.9 229 76.9
Psat2g121160 Pisum sativum HOM05D004641 ORTHO05D005871 1.3e-97 360.1 229 76.9
RcHm_v2.0_Chr4g0439951 Rosa chinensis HOM05D004641 ORTHO05D005871 1.3e-97 360.1 229 77.7
CARHR025060 Cardamine hirsuta HOM05D004641 ORTHO05D005871 3.8e-97 358.6 245 73.1
MD13G1073100 Malus domestica HOM05D004641 ORTHO05D005871 3.8e-97 358.6 229 76.4
AL1G38720 Arabidopsis lyrata HOM05D004641 ORTHO05D005871 5.0e-97 358.2 245 73.1
FvH4_4g31460 Fragaria vesca HOM05D004641 ORTHO05D005871 5.0e-97 358.2 229 76.4
FAN22G2174 Fragaria x ananassa HOM05D004641 ORTHO05D005871 6.5e-97 357.8 229 76.9
PGSC0003DMG400003384 Solanum tuberosum HOM05D004641 ORTHO05D005871 6.5e-97 357.8 232 75.0
Carub.0001s2410 Capsella rubella HOM05D004641 ORTHO05D005871 8.5e-97 357.5 245 73.5
Solyc05g007450.3 Solanum lycopersicum HOM05D004641 ORTHO05D005871 8.5e-97 357.5 232 75.0
Glyma.01G046400 Glycine max HOM05D004641 ORTHO05D005871 1.5e-96 356.7 229 75.5
Lalb_Chr10g0098211 Lupinus albus HOM05D004641 ORTHO05D005871 1.5e-96 356.7 229 76.4
Nn3g17219 Nelumbo nucifera HOM05D004641 ORTHO05D005871 1.5e-96 356.7 229 78.6
Sopen05g003330 Solanum pennellii HOM05D004641 ORTHO05D005871 3.2e-96 355.5 232 75.0
BcaC05g26381 Brassica carinata HOM05D004641 ORTHO05D005871 4.2e-96 355.1 245 72.7
C05p24110 Brassica napus HOM05D004641 ORTHO05D005871 4.2e-96 355.1 245 72.7
BolC5t31146H Brassica oleracea HOM05D004641 ORTHO05D005871 4.2e-96 355.1 245 72.7
AT1G26840 Arabidopsis thaliana HOM05D004641 ORTHO05D005871 5.5e-96 354.8 245 72.2
HanXRQChr12g0362561 Helianthus annuus HOM05D004641 ORTHO05D005871 7.2e-96 354.4 229 76.0
A09p40260 Brassica napus HOM05D004641 ORTHO05D005871 9.4e-96 354.0 245 72.2
Thhalv10008398m.g Eutrema salsugineum HOM05D004641 ORTHO05D005871 1.2e-95 353.6 245 72.7
SalBow2G2171 Salvia bowleyana HOM05D004641 ORTHO05D005871 1.2e-95 353.6 230 75.7
BraA09t39524Z Brassica rapa HOM05D004641 ORTHO05D005871 2.1e-95 352.8 245 72.2
Migut.L01304 Erythranthe guttata HOM05D004641 ORTHO05D005871 2.7e-95 352.4 229 75.5
Sc11g0001860 Simmondsia chinensis HOM05D004641 ORTHO05D005871 2.7e-95 352.4 225 76.0
BcaC07g39267 Brassica carinata HOM05D004641 ORTHO05D005871 3.6e-95 352.1 245 72.7
C08p22760 Brassica napus HOM05D004641 ORTHO05D005871 3.6e-95 352.1 245 72.7
BolC8t49912H Brassica oleracea HOM05D004641 ORTHO05D005871 3.6e-95 352.1 245 72.7
CAN.G58.35 Capsicum annuum HOM05D004641 ORTHO05D005871 1.4e-94 350.1 222 76.6
MBI05_g35443_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 3.0e-94 349.0 232 75.0
Sp1g21940 Schrenkiella parvula HOM05D004641 ORTHO05D005871 3.0e-94 349.0 226 76.1
FAN07G1510 Fragaria x ananassa HOM05D004641 ORTHO05D005871 5.2e-94 348.2 239 73.2
A08p27580 Brassica napus HOM05D004641 ORTHO05D005871 6.8e-94 347.8 245 71.8
BraA08t34696Z Brassica rapa HOM05D004641 ORTHO05D005871 6.8e-94 347.8 245 71.8
MELO3C008530.2 Cucumis melo HOM05D004641 ORTHO05D005871 6.8e-94 347.8 229 74.2
FAN12G2116 Fragaria x ananassa HOM05D001668 ORTHO05D005871 8.8e-94 347.4 239 72.8
PSO017G4882 Papaver somniferum HOM05D004641 ORTHO05D005871 8.8e-94 347.4 238 70.6
PSO478G0089 Papaver somniferum HOM05D004641 ORTHO05D005871 8.8e-94 347.4 238 70.6
ClCG11G009310 Citrullus lanatus HOM05D004641 ORTHO05D005871 1.5e-93 346.7 229 73.8
Lalb_Chr17g0340601 Lupinus albus HOM05D004641 ORTHO05D005871 1.5e-93 346.7 229 74.7
Aqoxy3G03361 Aquilegia oxysepala HOM05D004641 ORTHO05D005871 2.0e-93 346.3 226 75.7
FAN17G1817 Fragaria x ananassa HOM05D004641 ORTHO05D005871 2.0e-93 346.3 239 73.2
Hund25250 Selenicereus undatus HOM05D004641 ORTHO05D005871 2.6e-93 345.9 229 73.8
ECA233G1872 Erigeron canadensis HOM05D004641 ORTHO05D005871 3.4e-93 345.5 229 73.8
CsaV3_2G010800 Cucumis sativus L. HOM05D004641 ORTHO05D005871 7.5e-93 344.4 229 73.4
Psat0s2466g0040 Pisum sativum HOM05D004641 ORTHO05D005871 7.5e-93 344.4 228 73.7
DCAR_007149 Daucus carota HOM05D004641 ORTHO05D005871 9.8e-93 344.0 231 74.9
HanXRQChr08g0210501 Helianthus annuus HOM05D004641 ORTHO05D005871 1.7e-92 343.2 229 74.2
AUR62005767 Chenopodium quinoa HOM05D004641 ORTHO05D005871 2.2e-92 342.8 229 72.5
BcaB03g12011 Brassica carinata HOM05D004641 ORTHO05D005871 3.7e-92 342.0 245 70.2
AUR62028790 Chenopodium quinoa HOM05D004641 ORTHO05D005871 4.8e-92 341.7 229 72.1
Zm00001eb328260 Zea mays HOM05D004641 ORTHO05D005871 6.3e-92 341.3 230 72.6
Os07g0628600 Oryza sativa ssp. japonica HOM05D004641 ORTHO05D005871 7.0e-91 337.8 238 70.6
Nitab4.5_0012364g0020 Nicotiana tabacum HOM05D004641 ORTHO05D005871 3.5e-90 335.5 205 80.5
Aqoxy5G03781 Aquilegia oxysepala HOM05D004641 ORTHO05D005871 4.5e-90 335.1 226 73.9
SGA_v2.0_scaffold302G47825 Striga asiatica HOM05D004641 ORTHO05D005871 5.9e-90 334.7 232 74.1
EL10Ac6g13193 Beta vulgaris HOM05D004641 ORTHO05D005871 1.0e-89 334.0 263 64.3
Sed0002473 Sechium edule HOM05D004641 ORTHO05D005871 8.5e-89 330.9 229 71.2
ATR0800G170 Amborella trichopoda HOM05D004641 ORTHO05D005871 5.5e-88 328.2 230 71.3
Haze_12020 Corylus avellana HOM05D004641 ORTHO05D005871 2.7e-87 325.9 229 72.9
Sp5g24800 Schrenkiella parvula HOM05D004641 ORTHO05D005871 6.1e-87 324.7 219 73.1
Ah.03g135170 Amaranthus hybridus HOM05D004641 ORTHO05D005871 8.0e-87 324.3 205 76.1
SGA_v2.0_scaffold53G19380 Striga asiatica HOM05D004641 ORTHO05D005871 2.3e-86 322.8 226 73.0
arahy.Tifrunner.gnm1.ann1.K7EFN7 Arachis hypogaea HOM05D004641 ORTHO05D005871 1.5e-85 320.1 208 76.0
Oeu054890.1 Olea europaea HOM05D004641 ORTHO05D005871 9.8e-85 317.4 229 69.0
CARHR062650 Cardamine hirsuta HOM05D004641 ORTHO05D005871 1.3e-84 317.0 228 68.4
Oeu054889.1 Olea europaea HOM05D004641 ORTHO05D005871 8.3e-84 314.3 229 68.6
HPP92_016908 Vanilla planifolia HOM05D004641 ORTHO05D005871 1.8e-83 313.2 219 72.6
arahy.Tifrunner.gnm1.ann1.ITG5Q4 Arachis hypogaea HOM05D004641 ORTHO05D005871 3.1e-83 312.4 230 70.0
Sed0021592 Sechium edule HOM05D004641 ORTHO05D005871 3.1e-83 312.4 229 69.9
MD16G1074100 Malus domestica HOM05D004641 ORTHO05D005871 5.4e-83 311.6 246 65.0
SEGI_09090 Sequoiadendron giganteum HOM05D004641 ORTHO05D005871 5.0e-81 305.1 228 65.8
SHI55061 Sapria himalayana HOM05D004641 ORTHO05D005871 3.4e-77 292.4 224 64.3
CDE04G3358 Ceratophyllum demersum HOM05D004641 ORTHO05D005871 1.3e-76 290.4 231 65.4
Lsat_1_v5_gn_8_52860 Lactuca sativa HOM05D004641 ORTHO05D005871 4.6e-74 282.0 229 62.9
Dinv16637 Davidia involucrata HOM05D004641 ORTHO05D005871 1.2e-71 273.9 158 84.2
AagrBONN_evm.TU.Sc2ySwM_228.4149 Anthoceros agrestis HOM05D004641 ORTHO05D005871 1.6e-71 273.5 229 57.6
Mapoly0064s0110 Marchantia polymorpha HOM05D004641 ORTHO05D005871 2.7e-66 256.1 229 57.2
Pp3c13_2030 Physcomitrium patens HOM05D004641 ORTHO05D005871 3.5e-66 255.8 230 53.0
Gohir.A01G134350 Gossypium hirsutum HOM05D004641 ORTHO05D005871 4.3e-64 248.8 151 78.8
MBI09_g01021_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 4.3e-64 248.8 217 62.2
Gohir.A07G052500 Gossypium hirsutum HOM05D004641 ORTHO05D005871 6.2e-63 245.0 139 83.5
SMO114G0050 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 2.1e-58 229.9 197 53.3
SMO117G0352 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 7.8e-58 228.0 197 53.3
SMO254G0007 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 2.3e-57 226.5 197 52.3
SMO254G0005 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 5.1e-57 225.3 197 52.3
MBI02_g14195_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 5.6e-56 221.9 218 57.3
unitig_22.g6910 Utricularia gibba HOM05D004641 ORTHO05D005871 2.1e-55 219.9 232 54.7
MBI05_g01300_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 3.1e-54 216.1 231 53.7
Gohir.A08G223448 Gossypium hirsutum HOM05D004641 ORTHO05D005871 3.6e-47 192.6 112 80.4
SMO254G0008 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 6.2e-47 191.8 197 46.7
MBI10_g44256_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 5.8e-45 185.3 177 59.3
CDE08G0800 Ceratophyllum demersum HOM05D004641 ORTHO05D005871 5.6e-40 168.7 200 51.0
CBR_g31088 Chara braunii HOM05D000019 ORTHO05D000048 6.4e-36 155.2 139 54.7
Thecc.03G087000 Theobroma cacao HOM05D004641 ORTHO05D005871 3.5e-34 149.4 118 70.3
SMO254G0011 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 3.1e-30 136.3 182 40.1
MBI10_g06043_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 5.3e-30 135.6 207 44.4
TPR.G37129 Trifolium pratense HOM05D004641 ORTHO05D005871 6.9e-30 135.2 76 81.6
C05p19510 Brassica napus HOM05D004641 ORTHO05D005871 9.0e-30 134.8 104 68.3
BolC5t30653H Brassica oleracea HOM05D004641 ORTHO05D005871 9.0e-30 134.8 104 68.3
MD16G1073900 Malus domestica HOM05D004641 ORTHO05D005871 2.0e-29 133.7 83 77.1
MBI10_g47167_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 9.9e-29 131.3 220 42.3
Cre06.g285650 Chlamydomonas reinhardtii HOM05D004641 ORTHO05D005871 3.8e-28 129.4 190 41.1
SMO254G0019 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 1.1e-27 127.9 199 36.7
PRCOL_00006308 Prasinoderma coloniale HOM05D004641 ORTHO05D005871 4.8e-23 112.5 217 31.8
MBI13_g45115_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 2.1e-18 97.1 62 71.0
MBI14_g27757_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 3.5e-18 96.3 59 71.2
MBI18_g33078_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 4.6e-18 95.9 59 71.2
MBI11_g16036_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 3.9e-17 92.8 59 69.5
CBR_g31090 Chara braunii HOM05D004641 ORTHO05D005871 6.7e-17 92.0 91 48.4
MBI16_g45579_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 4.8e-15 85.9 65 63.1
A10p02040 Brassica napus HOM05D000207 ORTHO05D013918 2.4e-14 83.6 51 72.5
MBI13_g16082_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D012970 1.3e-12 77.8 52 67.3
A02p16560 Brassica napus HOM05D004641 ORTHO05D005871 4.6e-10 69.3 92 44.6
A09p47150 Brassica napus HOM05D004641 ORTHO05D022007 1.6e-07 60.8 59 55.9
BraA09t40177Z Brassica rapa HOM05D004641 ORTHO05D022007 1.6e-07 60.8 59 55.9
A09p29530 Brassica napus HOM05D004641 ORTHO05D022007 1.8e-06 57.4 61 50.8
EL10Ac2g04116 Beta vulgaris HOM05D004641 ORTHO05D005871 6.9e-06 55.5 46 60.9


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