Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G185500 Manihot esculenta HOM05D007096 ORTHO05D008288 4.4e-41 171.0 95 100.0
Manes.05G101400 Manihot esculenta HOM05D007096 ORTHO05D008288 7.2e-28 127.1 95 76.8
Haze_12011 Corylus avellana HOM05D007096 ORTHO05D008288 1.2e-17 93.2 95 55.8
Potri.010G169300 Populus trichocarpa HOM05D007096 ORTHO05D008288 1.5e-17 92.8 95 58.9
Cfa008979 Carpinus fangiana HOM05D007096 ORTHO05D008288 3.4e-17 91.7 95 55.8
Potri.008G086100 Populus trichocarpa HOM05D007096 ORTHO05D008288 6.3e-16 87.4 95 55.8
Ciclev10033178m.g Citrus clementina HOM05D007096 ORTHO05D008288 1.4e-15 86.3 96 53.1
Nn3g17242 Nelumbo nucifera HOM05D007096 ORTHO05D008288 1.4e-15 86.3 93 49.5
Sabra08G0063800 Salix brachista HOM05D007096 ORTHO05D008288 1.8e-15 85.9 93 55.9
CiPaw.05G135100 Carya illinoinensis HOM05D007096 ORTHO05D008288 2.4e-15 85.5 95 50.5
Sabra10G0129100 Salix brachista HOM05D007096 ORTHO05D008288 3.1e-15 85.1 95 54.7
CSS0036898 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 7.0e-15 84.0 93 53.8
CSS0038022 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 7.0e-15 84.0 93 53.8
Thecc.02G346100 Theobroma cacao HOM05D007096 ORTHO05D008288 3.5e-14 81.6 97 52.6
CSS0030953 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 1.3e-13 79.7 96 53.1
DCAR_031024 Daucus carota HOM05D007096 ORTHO05D008288 1.3e-13 79.7 95 46.3
TAR622G0633 Trochodendron aralioides HOM05D000618 ORTHO05D000454 2.3e-13 79.0 89 52.8
CiPaw.06G085100 Carya illinoinensis HOM05D007096 ORTHO05D008288 2.9e-13 78.6 95 48.4
Nn4g23168 Nelumbo nucifera HOM05D007096 ORTHO05D008288 3.8e-13 78.2 93 45.2
TAR629G1384 Trochodendron aralioides HOM05D000618 ORTHO05D000454 1.5e-12 76.3 88 54.5
Gohir.D12G168200 Gossypium hirsutum HOM05D007096 ORTHO05D008288 2.5e-12 75.5 95 51.6
Gorai.008G181100 Gossypium raimondii HOM05D007096 ORTHO05D008288 2.5e-12 75.5 95 51.6
Prupe.1G274800 Prunus persica HOM05D007096 ORTHO05D008288 2.5e-12 75.5 98 51.0
Gohir.A12G165100 Gossypium hirsutum HOM05D007096 ORTHO05D008288 7.2e-12 73.9 95 50.5
Gohir.A05G183700 Gossypium hirsutum HOM05D007096 ORTHO05D008288 6.1e-11 70.9 97 45.4
TAR371G0768 Trochodendron aralioides HOM05D007096 ORTHO05D008288 6.1e-11 70.9 94 46.8
Lalb_Chr04g0256051 Lupinus albus HOM05D015099 ORTHO05D008288 8.0e-11 70.5 96 43.8
Gorai.009G324600 Gossypium raimondii HOM05D007096 ORTHO05D008288 1.4e-10 69.7 97 45.4
Gohir.D05G304900 Gossypium hirsutum HOM05D007096 ORTHO05D008288 1.8e-10 69.3 97 45.4
CSS0038065 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 4.0e-10 68.2 92 44.6
RcHm_v2.0_Chr4g0439851 Rosa chinensis HOM05D007096 ORTHO05D008288 1.2e-09 66.6 96 46.9
TAR374G0516 Trochodendron aralioides HOM05D007096 ORTHO05D008288 2.0e-09 65.9 89 46.1
Rhsim12G0063900 Rhododendron simsii HOM05D007096 ORTHO05D008288 3.4e-09 65.1 104 45.2
Lalb_Chr10g0098271 Lupinus albus HOM05D015099 ORTHO05D008288 4.4e-09 64.7 92 40.2
Peaxi162Scf00911g00042 Petunia axillaris HOM05D007096 ORTHO05D008288 4.4e-09 64.7 93 44.1
Gohir.D02G125800 Gossypium hirsutum HOM05D007096 ORTHO05D008288 5.7e-09 64.3 97 44.3
Duzib268G0913 Durio zibethinus HOM05D007096 ORTHO05D008288 9.8e-09 63.5 97 47.4
Gorai.005G141500 Gossypium raimondii HOM05D007096 ORTHO05D008288 9.8e-09 63.5 97 44.3
Atru.chr9.225 Acer truncatum HOM05D007096 ORTHO05D008288 2.2e-08 62.4 85 44.7
Eucgr.B03446 Eucalyptus grandis HOM05D007096 ORTHO05D008288 2.2e-08 62.4 95 44.2
Cc00_g23090 Coffea canephora HOM05D007096 ORTHO05D008288 2.8e-08 62.0 94 43.6
Oeu054876.1 Olea europaea HOM05D007096 ORTHO05D008288 3.7e-08 61.6 89 44.9
Manes.14G078100 Manihot esculenta HOM05D007096 ORTHO05D008288 4.9e-08 61.2 92 41.3
Nitab4.5_0000145g0050 Nicotiana tabacum HOM05D007096 ORTHO05D008288 4.9e-08 61.2 87 47.1
QL10p017020 Quercus lobata HOM05D007096 ORTHO05D008288 8.3e-08 60.5 88 44.3
Gohir.A03G101000 Gossypium hirsutum HOM05D007096 ORTHO05D008288 1.1e-07 60.1 95 41.1
Ah.02g129680 Amaranthus hybridus HOM05D007096 ORTHO05D008288 2.4e-07 58.9 95 37.9
CiPaw.11G044600 Carya illinoinensis HOM05D007096 ORTHO05D008288 2.4e-07 58.9 88 43.2
ClCG11G009950 Citrullus lanatus HOM05D007096 ORTHO05D008288 2.4e-07 58.9 96 40.6
PGSC0003DMG400023201 Solanum tuberosum HOM05D007096 ORTHO05D008288 2.4e-07 58.9 94 39.4
COL.COLO4_09292 Corchorus olitorius HOM05D007096 ORTHO05D008288 5.4e-07 57.8 86 41.9
Prupe.5G193600 Prunus persica HOM05D007096 ORTHO05D008288 5.4e-07 57.8 93 39.8
FAN13G0716 Fragaria x ananassa HOM05D007096 ORTHO05D008288 1.2e-06 56.6 84 42.9
Peaxi162Scf00222g00814 Petunia axillaris HOM05D007096 ORTHO05D008288 1.2e-06 56.6 78 46.2
BraA02t06659Z Brassica rapa HOM05D009494 ORTHO05D011604 1.6e-06 56.2 111 34.2
COL.COLO4_23015 Corchorus olitorius HOM05D007096 ORTHO05D008288 1.6e-06 56.2 79 50.6
Thecc.03G087500 Theobroma cacao HOM05D007096 ORTHO05D008288 1.6e-06 56.2 94 43.6
CiPaw.12G013300 Carya illinoinensis HOM05D007096 ORTHO05D008288 2.0e-06 55.8 94 41.5
CsaV3_2G010680 Cucumis sativus L. HOM05D007096 ORTHO05D008288 2.0e-06 55.8 97 41.2
FAN08G2460 Fragaria x ananassa HOM05D007096 ORTHO05D008288 2.0e-06 55.8 84 42.9
Glyma.17G100200 Glycine max HOM05D007096 ORTHO05D008288 2.0e-06 55.8 96 43.8
Lj4g0000471 Lotus japonicus HOM05D007096 ORTHO05D008288 2.0e-06 55.8 88 45.5
RcHm_v2.0_Chr7g0181441 Rosa chinensis HOM05D007096 ORTHO05D008288 2.0e-06 55.8 84 42.9
Ciclev10023845m.g Citrus clementina HOM05D007096 ORTHO05D008288 2.7e-06 55.5 88 40.9
CARHR062540 Cardamine hirsuta HOM05D009494 ORTHO05D011604 3.5e-06 55.1 114 36.8
Phvul.002G085300 Phaseolus vulgaris HOM05D015099 ORTHO05D008288 4.5e-06 54.7 110 41.8
Eucgr.G02504 Eucalyptus grandis HOM05D007096 ORTHO05D008288 5.9e-06 54.3 89 43.8
Manes.06G092300 Manihot esculenta HOM05D007096 ORTHO05D008288 5.9e-06 54.3 94 41.5
A02p15990 Brassica napus HOM05D009494 ORTHO05D011604 7.8e-06 53.9 117 32.5
Glyma.02G107400 Glycine max HOM05D015099 ORTHO05D008288 7.8e-06 53.9 108 40.7
Gohir.D04G191800 Gossypium hirsutum HOM05D007096 ORTHO05D008288 7.8e-06 53.9 96 40.6


User provided reference genes

Program Settings