Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G177300 Manihot esculenta HOM05D007281 ORTHO05D009241 2.1e-134 483.0 248 100.0
Sabra09G0050300 Salix brachista HOM05D007281 ORTHO05D009241 3.1e-61 240.0 244 50.4
Sabra16G0168300 Salix brachista HOM05D007281 ORTHO05D009241 1.0e-56 224.9 232 51.3
Actinidia30489 Actinidia chinensis HOM05D007281 ORTHO05D009241 9.6e-55 218.4 223 53.4
Potri.001G273100 Populus trichocarpa HOM05D007281 ORTHO05D009241 8.1e-54 215.3 228 52.2
Dinv15494 Davidia involucrata HOM05D007281 ORTHO05D009241 1.1e-53 214.9 210 55.2
Hma1.2p1_0565F.1_g179540 Hydrangea macrophylla HOM05D007281 ORTHO05D009241 9.0e-53 211.8 205 53.7
Atru.chr6.3074 Acer truncatum HOM05D007281 ORTHO05D009241 1.5e-52 211.1 222 51.8
TAR633G2446 Trochodendron aralioides HOM05D007281 ORTHO05D009241 1.7e-51 207.6 245 46.9
Cfa014545 Carpinus fangiana HOM05D007281 ORTHO05D009241 2.2e-51 207.2 210 52.9
CSS0001951 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 6.4e-51 205.7 210 52.4
CSS0030135 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 6.4e-51 205.7 210 52.4
GSVIVG01020865001 Vitis vinifera HOM05D007281 ORTHO05D009241 1.1e-50 204.9 195 54.9
TAR636G0075 Trochodendron aralioides HOM05D007281 ORTHO05D009241 4.2e-50 203.0 216 48.1
Haze_13088 Corylus avellana HOM05D007281 ORTHO05D009241 5.4e-50 202.6 208 52.9
Thecc.02G171700 Theobroma cacao HOM05D007281 ORTHO05D009241 5.4e-50 202.6 210 51.0
Potri.009G067400 Populus trichocarpa HOM05D007281 ORTHO05D009241 4.6e-49 199.5 165 59.4
Lj1P735T42 Lonicera japonica HOM05D007281 ORTHO05D009241 6.0e-49 199.1 189 56.1
Rhsim04G0063100 Rhododendron simsii HOM05D007281 ORTHO05D009241 6.0e-49 199.1 188 54.8
DCAR_012978 Daucus carota HOM05D007281 ORTHO05D009241 4.0e-45 186.4 187 51.9
QL03p011182 Quercus lobata HOM05D007281 ORTHO05D009241 1.5e-44 184.5 204 50.5
Sc06g0009160 Simmondsia chinensis HOM05D007281 ORTHO05D009241 2.0e-44 184.1 193 52.3
CANSAT64G1356 Cannabis sativa HOM05D007281 ORTHO05D009241 8.4e-43 178.7 229 46.7
Nitab4.5_0001871g0100 Nicotiana tabacum HOM05D007281 ORTHO05D009241 1.9e-42 177.6 218 46.8
Nitab4.5_0002370g0080 Nicotiana tabacum HOM05D007281 ORTHO05D009241 1.2e-41 174.9 210 47.1
Aqoxy1G00179 Aquilegia oxysepala HOM05D007281 ORTHO05D009241 3.5e-41 173.3 215 41.9
CiPaw.03G169800 Carya illinoinensis HOM05D007281 ORTHO05D009241 4.6e-41 172.9 200 48.5
Peaxi162Scf00007g02726 Petunia axillaris HOM05D007281 ORTHO05D009241 1.8e-40 171.0 226 45.6
Gohir.A04G105900 Gossypium hirsutum HOM05D007281 ORTHO05D009241 8.7e-40 168.7 179 48.6
Gorai.012G131800 Gossypium raimondii HOM05D007281 ORTHO05D009241 1.1e-39 168.3 195 47.2
Gohir.D04G145700 Gossypium hirsutum HOM05D007281 ORTHO05D009241 1.5e-39 167.9 195 46.7
AUR62041771 Chenopodium quinoa HOM05D007281 ORTHO05D009241 1.3e-38 164.9 193 45.1
EL10As1g23104 Beta vulgaris HOM05D007281 ORTHO05D009241 2.8e-38 163.7 213 41.3
Cc05_g06270 Coffea canephora HOM05D007281 ORTHO05D009241 3.7e-38 163.3 197 46.7
Cpa.g.sc116.70 Carica papaya HOM05D007281 ORTHO05D009241 4.8e-38 162.9 215 44.7
TWI36G0005 Tripterygium wilfordii HOM05D007281 ORTHO05D009241 1.1e-37 161.8 194 47.4
Nn8g41289 Nelumbo nucifera HOM05D007281 ORTHO05D009241 3.1e-37 160.2 180 47.2
Solyc07g054680.3 Solanum lycopersicum HOM05D007281 ORTHO05D009241 2.0e-36 157.5 201 46.8
CAN.G508.23 Capsicum annuum HOM05D007281 ORTHO05D009241 3.4e-36 156.8 204 46.1
Duzib052G0115 Durio zibethinus HOM05D007281 ORTHO05D009241 7.6e-36 155.6 181 47.0
MBI03_g06061_MAGBIO Magnolia biondii HOM05D007281 ORTHO05D009241 3.8e-35 153.3 186 43.5
SalBow7G4701 Salvia bowleyana HOM05D007281 ORTHO05D009241 3.8e-35 153.3 196 42.3
PSO384G2432 Papaver somniferum HOM05D007281 ORTHO05D009241 4.9e-35 152.9 197 44.2
Ah.12g062420 Amaranthus hybridus HOM05D007281 ORTHO05D009241 8.4e-35 152.1 213 39.4
Glyma.13G301000 Glycine max HOM05D007281 ORTHO05D009241 2.5e-34 150.6 186 41.9
SGA_v2.0_scaffold70G23463 Striga asiatica HOM05D007281 ORTHO05D009241 2.5e-34 150.6 194 42.3
Hund01238 Selenicereus undatus HOM05D007281 ORTHO05D009241 3.2e-34 150.2 177 42.4
Ca_01535_v3 Cicer arietinum L. HOM05D007281 ORTHO05D009241 5.5e-34 149.4 191 43.5
Hund01235 Selenicereus undatus HOM05D007281 ORTHO05D009241 7.1e-34 149.1 177 41.8
MSTRG.13304 Avicennia marina HOM05D007281 ORTHO05D009241 4.6e-33 146.4 210 41.4
PGR042G3246 Punica granatum HOM05D007281 ORTHO05D009241 3.9e-32 143.3 214 43.0
ClCG01G013900 Citrullus lanatus HOM05D007281 ORTHO05D009241 8.7e-32 142.1 210 39.5
Lj3g0021775 Lotus japonicus HOM05D007281 ORTHO05D009241 8.7e-32 142.1 199 42.7
CsaV3_1G014130 Cucumis sativus L. HOM05D007281 ORTHO05D009241 8.2e-30 135.6 213 39.0
Medtr2g007050 Medicago truncatula HOM05D007281 ORTHO05D009241 1.8e-29 134.4 230 35.7
Medtr2g090030 Medicago truncatula HOM05D007281 ORTHO05D009241 3.1e-29 133.7 230 35.7
Psat5g268080 Pisum sativum HOM05D007281 ORTHO05D009241 3.1e-29 133.7 193 41.5
Ciclev10016159m.g Citrus clementina HOM05D007281 ORTHO05D009241 4.1e-29 133.3 138 50.7
ECA234G1359 Erigeron canadensis HOM05D007281 ORTHO05D009241 4.1e-29 133.3 178 38.2
PGSC0003DMG400018370 Solanum tuberosum HOM05D007281 ORTHO05D009241 1.2e-28 131.7 189 43.4
arahy.Tifrunner.gnm1.ann1.JM9TK1 Arachis hypogaea HOM05D007281 ORTHO05D009241 1.5e-28 131.3 177 42.4
HanXRQChr15g0488101 Helianthus annuus HOM05D007281 ORTHO05D009241 1.5e-28 131.3 189 37.6
AL1G23070 Arabidopsis lyrata HOM05D007281 ORTHO05D009241 2.0e-28 131.0 152 47.4
arahy.Tifrunner.gnm1.ann1.HBB9ZN Arachis hypogaea HOM05D001233 ORTHO05D009241 5.9e-28 129.4 180 41.1
Lalb_Chr14g0366621 Lupinus albus HOM05D007281 ORTHO05D009241 1.3e-27 128.3 192 41.1
Carub.0001s1156 Capsella rubella HOM05D007281 ORTHO05D009241 8.5e-27 125.6 152 44.7
PSO339G5345 Papaver somniferum HOM05D007281 ORTHO05D009241 1.1e-26 125.2 151 45.0
Thhalv10007999m.g Eutrema salsugineum HOM05D007281 ORTHO05D009241 1.9e-26 124.4 152 46.1
vmacro09292 Vaccinium macrocarpon HOM05D007281 ORTHO05D009241 2.1e-25 120.9 117 52.1
C05p11270 Brassica napus HOM05D007281 ORTHO05D009241 4.6e-25 119.8 152 46.1
BolC5t29876H Brassica oleracea HOM05D007281 ORTHO05D009241 4.6e-25 119.8 152 46.1
TPR.G27076 Trifolium pratense HOM05D007281 ORTHO05D009241 4.6e-25 119.8 192 37.5
Sed0007470 Sechium edule HOM05D007281 ORTHO05D009241 1.0e-24 118.6 194 38.7
CARHR012220 Cardamine hirsuta HOM05D007281 ORTHO05D009241 3.9e-24 116.7 153 43.8
VMungo1080G1478 Vigna mungo HOM05D007281 ORTHO05D009241 3.9e-24 116.7 192 38.0
A06p09560 Brassica napus HOM05D007281 ORTHO05D009241 1.1e-23 115.2 152 42.1
BraA06t24146Z Brassica rapa HOM05D007281 ORTHO05D009241 1.1e-23 115.2 152 44.1
Migut.M00334 Erythranthe guttata HOM05D007281 ORTHO05D009241 1.5e-23 114.8 193 37.3
arahy.Tifrunner.gnm1.ann1.F4A8JX Arachis hypogaea HOM05D007281 ORTHO05D009241 1.9e-23 114.4 142 43.7
Sp1g10520 Schrenkiella parvula HOM05D007281 ORTHO05D009241 1.9e-23 114.4 150 44.0
THA.LOC104809493 Tarenaya hassleriana HOM05D007281 ORTHO05D009241 1.9e-23 114.4 151 45.7
Aa31LG1G2830 Aethionema arabicum HOM05D007281 ORTHO05D009241 1.3e-22 111.7 150 42.0
Lsat_1_v5_gn_4_69540 Lactuca sativa HOM05D007281 ORTHO05D009241 1.1e-21 108.6 175 30.9
Phvul.005G107600 Phaseolus vulgaris HOM05D007281 ORTHO05D009241 1.4e-21 108.2 233 34.3
BcaC05g25243 Brassica carinata HOM05D007281 ORTHO05D009241 4.1e-21 106.7 152 40.8
ATR1127G094 Amborella trichopoda HOM05D007281 ORTHO05D009241 1.7e-19 101.3 171 36.3
HPP92_019763 Vanilla planifolia HOM05D007281 ORTHO05D009241 1.7e-19 101.3 174 33.3
MD17G1084400 Malus domestica HOM05D007281 ORTHO05D009241 1.9e-18 97.8 163 39.9
Prupe.3G231200 Prunus persica HOM05D007281 ORTHO05D009241 2.7e-17 94.0 133 44.4
AT1G11900 Arabidopsis thaliana HOM05D007281 ORTHO05D009241 1.0e-16 92.0 122 43.4
Eucgr.A01777 Eucalyptus grandis HOM05D007281 ORTHO05D009241 3.0e-16 90.5 98 49.0
FvH4_6g24020 Fragaria vesca HOM05D007281 ORTHO05D009241 1.5e-15 88.2 128 42.2
FAN14G1737 Fragaria x ananassa HOM05D007281 ORTHO05D009241 1.5e-15 88.2 128 42.2
Os05g0481800 Oryza sativa ssp. japonica HOM05D007281 ORTHO05D009241 2.8e-14 84.0 190 30.0
RcHm_v2.0_Chr1g0342741 Rosa chinensis HOM05D007281 ORTHO05D009241 1.4e-13 81.6 118 40.7
FvH4_6g44590 Fragaria vesca HOM05D007281 ORTHO05D009241 2.4e-13 80.9 162 34.6
FAN14G4544 Fragaria x ananassa HOM05D007281 ORTHO05D009241 3.1e-13 80.5 162 34.6
FAN02G4278 Fragaria x ananassa HOM05D007281 ORTHO05D009241 6.9e-13 79.3 221 29.0
Sopen07g028580 Solanum pennellii HOM05D007281 ORTHO05D009241 1.4e-10 71.6 125 36.8
Nn2g14540 Nelumbo nucifera HOM05D007281 ORTHO05D009241 2.1e-09 67.8 96 38.5
Zm00001eb290940 Zea mays HOM05D007281 ORTHO05D009241 2.7e-09 67.4 108 30.6
Glyma.12G201200 Glycine max HOM05D007281 ORTHO05D009241 6.1e-09 66.2 71 47.9
MD14G1065400 Malus domestica HOM05D007281 ORTHO05D009241 4.4e-07 60.1 59 54.2
Nn1g08105 Nelumbo nucifera HOM05D007281 ORTHO05D009241 7.4e-07 59.3 66 43.9


User provided reference genes

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