Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.6e-227 792.3 392 100.0
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 3.2e-207 724.9 389 92.0
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 2.6e-180 635.6 392 81.6
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.0e-176 623.6 393 79.1
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 2.3e-176 622.5 406 77.1
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 6.6e-176 620.9 385 79.7
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 4.3e-175 618.2 398 76.1
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 4.3e-175 618.2 394 77.7
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 9.5e-175 617.1 397 76.1
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 6.1e-174 614.4 389 78.4
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 1.4e-173 613.2 397 76.8
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 1.4e-173 613.2 396 77.8
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 1.8e-173 612.8 444 72.1
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 3.0e-173 612.1 396 77.0
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 4.0e-173 611.7 389 78.4
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 5.2e-173 611.3 392 77.6
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 6.8e-173 610.9 408 76.2
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 8.9e-173 610.5 397 76.3
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 3.4e-172 608.6 389 78.1
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 4.4e-172 608.2 389 78.9
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 4.4e-172 608.2 385 78.7
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 9.8e-172 607.1 412 75.0
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.7e-171 606.3 388 77.3
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.7e-171 606.3 402 76.4
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 2.2e-171 605.9 392 77.6
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 4.1e-170 601.7 392 76.5
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 4.1e-170 601.7 407 74.7
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 4.1e-170 601.7 399 75.7
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 9.2e-170 600.5 404 74.8
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.2e-169 600.1 403 75.7
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 2.0e-169 599.4 407 74.7
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 5.9e-169 597.8 397 76.1
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 7.8e-169 597.4 397 75.6
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 1.0e-168 597.0 401 75.8
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 3.0e-168 595.5 388 77.6
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 5.0e-168 594.7 388 77.1
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 6.6e-168 594.3 388 75.5
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 1.1e-167 593.6 392 75.3
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 4.3e-167 591.7 388 75.5
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 4.3e-167 591.7 391 76.0
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 7.3e-167 590.9 401 74.6
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 9.5e-167 590.5 388 76.3
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 1.6e-166 589.7 397 75.3
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 2.1e-166 589.3 403 71.5
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 2.1e-166 589.3 398 74.4
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 2.8e-166 589.0 391 76.2
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 3.6e-166 588.6 390 75.4
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 6.2e-166 587.8 391 75.7
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 4.0e-165 585.1 404 73.8
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 6.8e-165 584.3 396 75.0
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 1.2e-164 583.6 336 82.7
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 1.5e-164 583.2 367 77.9
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 1.5e-164 583.2 367 77.9
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 3.4e-164 582.0 369 78.0
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 3.4e-164 582.0 409 74.1
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 5.8e-164 581.3 393 73.8
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 1.7e-163 579.7 366 77.6
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 1.7e-163 579.7 406 71.7
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 1.7e-163 579.7 378 75.4
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 2.9e-163 578.9 385 75.3
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 3.7e-163 578.6 371 77.4
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 3.7e-163 578.6 371 77.4
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 3.7e-163 578.6 374 77.0
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 4.9e-163 578.2 367 77.7
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 4.9e-163 578.2 341 82.1
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 6.4e-163 577.8 385 75.1
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 6.4e-163 577.8 408 71.8
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 1.4e-162 576.6 383 74.4
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 1.9e-162 576.2 413 71.2
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.6e-161 573.2 350 78.9
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 2.0e-161 572.8 409 72.1
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 2.0e-161 572.8 409 72.1
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 3.5e-161 572.0 350 78.6
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 3.5e-161 572.0 350 78.6
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 3.5e-161 572.0 361 77.6
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 7.8e-161 570.9 371 77.1
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 7.8e-161 570.9 399 73.7
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 1.3e-160 570.1 401 72.3
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 6.6e-160 567.8 333 82.9
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 2.5e-159 565.8 404 70.5
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 3.3e-159 565.5 387 73.9
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 4.3e-159 565.1 339 79.6
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 4.3e-159 565.1 397 71.8
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 9.5e-159 563.9 330 81.5
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 2.3e-157 559.3 324 83.3
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 4.0e-157 558.5 406 68.7
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 5.2e-157 558.1 417 70.0
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 7.5e-156 554.3 389 71.2
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 1.1e-154 550.4 399 69.9
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 7.1e-154 547.7 325 79.7
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 7.1e-154 547.7 334 77.8
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 1.6e-153 546.6 394 71.8
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.7e-152 543.1 369 76.2
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 8.6e-152 540.8 330 78.2
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 6.4e-147 524.6 299 85.3
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 6.4e-147 524.6 393 68.2
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 6.4e-147 524.6 429 65.0
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.9e-146 523.1 400 70.0
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.9e-146 523.1 371 72.5
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 1.2e-145 520.4 334 77.8
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 3.3e-143 512.3 403 68.0
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 1.1e-138 497.3 393 66.9
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 7.1e-138 494.6 358 69.6
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 2.1e-129 466.5 324 68.5
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 8.7e-128 461.1 323 68.4
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 7.4e-127 458.0 306 76.1
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 1.3e-126 457.2 328 67.1
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 6.9e-125 451.4 331 65.6
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 1.6e-118 430.3 337 66.2
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 3.9e-112 409.1 270 75.6
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 6.9e-109 398.3 282 68.4
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 4.7e-89 332.4 296 55.1
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 2.3e-88 330.1 323 58.5
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 5.2e-88 328.9 303 54.1
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 2.9e-83 313.2 303 50.2
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 5.2e-72 275.8 241 59.8
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 5.2e-64 249.2 194 70.1
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.0e-56 224.9 186 61.8
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.4e-53 214.5 130 75.4
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 1.1e-42 178.3 124 70.2
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 4.7e-33 146.4 102 67.6
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 4.3e-26 123.2 107 57.0
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 4.2e-21 106.7 124 48.4
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 6.0e-20 102.8 74 70.3
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 5.1e-19 99.8 158 39.9
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 8.7e-19 99.0 106 50.0
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 4.8e-17 93.2 62 67.7


User provided reference genes

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