Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G174332 Manihot esculenta HOM05D001685 ORTHO05D006653 1.4e-136 489.6 243 100.0
Manes.07G091200 Manihot esculenta HOM05D001685 ORTHO05D006653 1.2e-103 380.2 213 90.1
Manes.01G174600 Manihot esculenta HOM05D001685 ORTHO05D006653 6.0e-103 377.9 202 93.1
Manes.07G090600 Manihot esculenta HOM05D001685 ORTHO05D006653 9.6e-93 344.0 202 86.1
Potri.001G239600 Populus trichocarpa HOM05D001685 ORTHO05D006653 1.1e-56 224.2 190 60.0
Manes.07G091000 Manihot esculenta HOM05D001685 ORTHO05D006653 9.4e-56 221.1 217 58.5
TWI79G0438 Tripterygium wilfordii HOM05D001685 ORTHO05D006653 6.7e-54 214.9 189 57.7
Cfa011498 Carpinus fangiana HOM05D002515 ORTHO05D006653 4.8e-52 208.8 241 49.0
Duzib150G0753 Durio zibethinus HOM05D001685 ORTHO05D006653 9.1e-51 204.5 215 51.6
Gohir.D13G229400 Gossypium hirsutum HOM05D001685 ORTHO05D006653 9.1e-51 204.5 216 51.4
Haze_24093 Corylus avellana HOM05D001685 ORTHO05D006653 1.5e-50 203.8 242 48.3
Gorai.013G260100 Gossypium raimondii HOM05D001685 ORTHO05D006653 4.5e-50 202.2 216 50.9
Gohir.A13G224400 Gossypium hirsutum HOM05D001685 ORTHO05D006653 1.7e-49 200.3 204 52.0
Cpa.g.sc81.154 Carica papaya HOM05D001685 ORTHO05D006653 9.4e-48 194.5 206 51.0
Nitab4.5_0000317g0040 Nicotiana tabacum HOM05D001685 ORTHO05D006653 1.6e-47 193.7 248 47.6
Thecc.09G300600 Theobroma cacao HOM05D001685 ORTHO05D006653 2.7e-47 193.0 204 51.5
Sabra16G0144500 Salix brachista HOM05D001685 ORTHO05D006653 1.8e-46 190.3 250 46.8
PGR083G0190 Punica granatum HOM05D001685 ORTHO05D006653 2.6e-45 186.4 210 50.0
CiPaw.13G094700 Carya illinoinensis HOM05D001685 ORTHO05D006653 3.3e-45 186.0 207 50.2
COL.COLO4_19167 Corchorus olitorius HOM05D001685 ORTHO05D006653 1.1e-43 181.0 241 44.4
Dinv12423 Davidia involucrata HOM05D001685 ORTHO05D006653 1.1e-43 181.0 243 45.7
Atru.chr3.3899 Acer truncatum HOM05D001685 ORTHO05D006653 2.0e-42 176.8 314 37.3
Nitab4.5_0002557g0010 Nicotiana tabacum HOM05D001685 ORTHO05D006653 2.0e-42 176.8 247 44.9
QL01p032067 Quercus lobata HOM05D001685 ORTHO05D006653 2.0e-42 176.8 230 43.9
ClCG05G026700 Citrullus lanatus HOM05D001685 ORTHO05D006653 5.9e-42 175.3 209 47.4
Prupe.6G078100 Prunus persica HOM05D001685 ORTHO05D006653 1.0e-41 174.5 216 47.7
CsaV3_5G036630 Cucumis sativus L. HOM05D001685 ORTHO05D006653 1.3e-41 174.1 213 46.5
Sopen04g026040 Solanum pennellii HOM05D001685 ORTHO05D006653 1.3e-41 174.1 236 43.2
VMungo1383G3233 Vigna mungo HOM05D001685 ORTHO05D006653 1.3e-41 174.1 208 47.1
Migut.J01517 Erythranthe guttata HOM05D001685 ORTHO05D006653 1.7e-41 173.7 234 43.2
vmacro03073 Vaccinium macrocarpon HOM05D001685 ORTHO05D006653 1.7e-41 173.7 242 41.7
MELO3C012459.2 Cucumis melo HOM05D001685 ORTHO05D006653 2.9e-41 172.9 198 49.0
Peaxi162Scf00066g00069 Petunia axillaris HOM05D001685 ORTHO05D006653 2.9e-41 172.9 220 46.4
PGSC0003DMG400046448 Solanum tuberosum HOM05D001685 ORTHO05D006653 3.8e-41 172.6 236 43.6
CSS0035660 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D006653 5.0e-41 172.2 252 42.9
Cc10_g08830 Coffea canephora HOM05D001685 ORTHO05D006653 8.5e-41 171.4 213 46.9
Solyc04g058140.3 Solanum lycopersicum HOM05D001685 ORTHO05D006653 8.5e-41 171.4 236 43.2
A08p35550 Brassica napus HOM05D001685 ORTHO05D006653 1.1e-40 171.0 201 47.8
BraA08t35461Z Brassica rapa HOM05D001685 ORTHO05D006653 1.1e-40 171.0 201 47.8
Thhalv10007444m.g Eutrema salsugineum HOM05D001685 ORTHO05D006653 1.9e-40 170.2 200 47.0
TPR.G18576 Trifolium pratense HOM05D001685 ORTHO05D006653 1.9e-40 170.2 232 44.0
THA.LOC104826328 Tarenaya hassleriana HOM05D001685 ORTHO05D006653 2.5e-40 169.9 202 47.0
AT1G07615 Arabidopsis thaliana HOM05D001685 ORTHO05D006653 3.2e-40 169.5 194 46.9
Ca_09792_v3 Cicer arietinum L. HOM05D001685 ORTHO05D006653 5.5e-40 168.7 234 44.0
BcaB03g13384 Brassica carinata HOM05D001685 ORTHO05D006653 1.2e-39 167.5 201 46.8
CAN.G311.3 Capsicum annuum HOM05D001685 ORTHO05D000105 1.2e-39 167.5 223 45.7
Dinv16999 Davidia involucrata HOM05D001685 ORTHO05D006653 1.6e-39 167.2 243 42.8
Dinv42948 Davidia involucrata HOM05D001685 ORTHO05D006653 1.6e-39 167.2 243 42.8
Dinv43152 Davidia involucrata HOM05D001685 ORTHO05D006653 1.6e-39 167.2 243 42.8
Lalb_Chr19g0128141 Lupinus albus HOM05D001685 ORTHO05D006653 1.6e-39 167.2 215 47.9
HanXRQChr05g0134921 Helianthus annuus HOM05D001685 ORTHO05D006653 2.1e-39 166.8 188 49.5
GSVIVG01024971001 Vitis vinifera HOM05D001685 ORTHO05D006653 2.1e-39 166.8 190 50.5
Aa31sc36G30 Aethionema arabicum HOM05D001685 ORTHO05D006653 3.6e-39 166.0 176 51.1
Rhsim13G0082800 Rhododendron simsii HOM05D001685 ORTHO05D006653 3.6e-39 166.0 242 42.6
Actinidia37203 Actinidia chinensis HOM05D001685 ORTHO05D006653 4.7e-39 165.6 240 40.8
Psat6g138600 Pisum sativum HOM05D001685 ORTHO05D006653 4.7e-39 165.6 231 44.2
Lsat_1_v5_gn_8_73061 Lactuca sativa HOM05D001685 ORTHO05D006653 6.1e-39 165.2 198 48.0
Eucgr.B02369 Eucalyptus grandis HOM05D001685 ORTHO05D006653 1.0e-38 164.5 208 45.2
Lj3g0002633 Lotus japonicus HOM05D001685 ORTHO05D006653 1.0e-38 164.5 236 43.6
Sp1g06330 Schrenkiella parvula HOM05D001685 ORTHO05D006653 1.0e-38 164.5 188 47.9
Oeu052796.1 Olea europaea HOM05D001685 ORTHO05D006653 1.4e-38 164.1 231 43.3
DCAR_004329 Daucus carota HOM05D001685 ORTHO05D006653 1.8e-38 163.7 237 43.0
ECA236G2424 Erigeron canadensis HOM05D001685 ORTHO05D006653 1.8e-38 163.7 208 44.2
Phvul.002G003900 Phaseolus vulgaris HOM05D001685 ORTHO05D006653 1.8e-38 163.7 195 47.2
Glyma.01G148100 Glycine max HOM05D001685 ORTHO05D006653 4.0e-38 162.5 220 44.1
SalBow6G3863 Salvia bowleyana HOM05D001685 ORTHO05D006653 4.0e-38 162.5 222 44.6
DCAR_005335 Daucus carota HOM05D001685 ORTHO05D006653 6.8e-38 161.8 238 44.1
Aqoxy5G01203 Aquilegia oxysepala HOM05D001685 ORTHO05D006653 4.4e-37 159.1 242 40.9
arahy.Tifrunner.gnm1.ann1.ZC6F0H Arachis hypogaea HOM05D001685 ORTHO05D006653 4.4e-37 159.1 219 43.8
TAR636G3542 Trochodendron aralioides HOM05D001685 ORTHO05D006653 5.7e-37 158.7 248 41.1
A09p66260 Brassica napus HOM05D001685 ORTHO05D006653 7.5e-37 158.3 185 45.4
BraA09t41964Z Brassica rapa HOM05D001685 ORTHO05D006653 9.7e-37 157.9 191 46.6
PSO384G4450 Papaver somniferum HOM05D001685 ORTHO05D006653 1.3e-36 157.5 238 42.0
Carub.0001s0694 Capsella rubella HOM05D001685 ORTHO05D006653 2.2e-36 156.8 183 47.0
Medtr1g073010 Medicago truncatula HOM05D001685 ORTHO05D006653 2.2e-36 156.8 226 43.8
Sed0007817 Sechium edule HOM05D001685 ORTHO05D006653 2.2e-36 156.8 218 43.1
arahy.Tifrunner.gnm1.ann1.KF4YKV Arachis hypogaea HOM05D001685 ORTHO05D006653 2.8e-36 156.4 217 44.2
BcaC07g42487 Brassica carinata HOM05D001685 ORTHO05D006653 3.7e-36 156.0 194 45.4
CARHR007400 Cardamine hirsuta HOM05D001685 ORTHO05D006653 3.7e-36 156.0 189 46.6
C08p03210 Brassica napus HOM05D001685 ORTHO05D006653 4.8e-36 155.6 199 46.2
BolC8t47119H Brassica oleracea HOM05D001685 ORTHO05D006653 4.8e-36 155.6 199 46.2
RcHm_v2.0_Chr2g0137651 Rosa chinensis HOM05D001685 ORTHO05D006653 8.3e-36 154.8 190 47.9
Actinidia07035 Actinidia chinensis HOM05D001685 ORTHO05D006653 1.1e-35 154.5 222 41.9
RcHm_v2.0_Chr5g0064441 Rosa chinensis HOM05D001685 ORTHO05D006653 1.4e-35 154.1 182 47.8
BcaC07g41983 Brassica carinata HOM05D001685 ORTHO05D006653 1.8e-35 153.7 185 44.9
C08p50430 Brassica napus HOM05D001685 ORTHO05D006653 1.8e-35 153.7 185 44.9
BolC8t52571H Brassica oleracea HOM05D001685 ORTHO05D006653 1.8e-35 153.7 185 44.9
arahy.Tifrunner.gnm1.ann1.B8I18B Arachis hypogaea HOM05D001685 ORTHO05D006653 4.1e-35 152.5 223 43.5
MD11G1109500 Malus domestica HOM05D001685 ORTHO05D006653 4.1e-35 152.5 205 42.9
ATR0618G259 Amborella trichopoda HOM05D001685 ORTHO05D006653 5.3e-35 152.1 248 41.1
FAN21G0377 Fragaria x ananassa HOM05D002515 ORTHO05D006653 1.2e-34 151.0 190 47.4
TAR381G0153 Trochodendron aralioides HOM05D001685 ORTHO05D006653 2.0e-34 150.2 219 42.9
EL10As8g23878 Beta vulgaris HOM05D001685 ORTHO05D006653 2.9e-33 146.4 208 41.8
FvH4_3g36011 Fragaria vesca HOM05D001685 ORTHO05D006653 2.9e-33 146.4 189 47.1
Hund18911 Selenicereus undatus HOM05D001685 ORTHO05D006653 3.8e-33 146.0 229 40.2
HPP92_014383 Vanilla planifolia HOM05D001685 ORTHO05D006653 5.0e-33 145.6 246 37.0
AUR62009576 Chenopodium quinoa HOM05D001685 ORTHO05D006653 8.5e-33 144.8 257 39.3
Os11g0704300 Oryza sativa ssp. japonica HOM05D001685 ORTHO05D006653 8.5e-33 144.8 247 37.2
MSTRG.19725 Avicennia marina HOM05D001685 ORTHO05D006653 2.5e-32 143.3 214 43.9
Lj1A153T35 Lonicera japonica HOM05D001685 ORTHO05D006653 4.2e-32 142.5 222 40.1
Sc21g0005770 Simmondsia chinensis HOM05D001685 ORTHO05D006653 4.2e-32 142.5 238 37.8
Aqoxy4G02919 Aquilegia oxysepala HOM05D001685 ORTHO05D006653 7.2e-32 141.7 241 36.1
CAN.G1325.3 Capsicum annuum HOM05D001685 ORTHO05D006653 1.2e-31 141.0 218 41.3
AUR62001788 Chenopodium quinoa HOM05D001685 ORTHO05D006653 1.2e-31 141.0 231 41.6
Nn2g10368 Nelumbo nucifera HOM05D001685 ORTHO05D006653 1.6e-31 140.6 210 40.0
AL1G17800 Arabidopsis lyrata HOM05D001685 ORTHO05D006653 6.8e-30 135.2 194 41.8
CDE09G0753 Ceratophyllum demersum HOM05D001685 ORTHO05D006653 1.2e-29 134.4 251 34.3
SHI05944 Sapria himalayana HOM05D001685 ORTHO05D006653 2.0e-29 133.7 152 48.0
Zm00001eb417820 Zea mays HOM05D001685 ORTHO05D006653 7.0e-27 125.2 228 35.1
VMungo1383G1510 Vigna mungo HOM05D001685 ORTHO05D006653 1.0e-25 121.3 94 59.6
SEGI_41152 Sequoiadendron giganteum HOM05D001685 ORTHO05D006653 1.3e-25 120.9 191 40.8
SEGI_38445 Sequoiadendron giganteum HOM05D001685 ORTHO05D006653 1.9e-24 117.1 87 60.9
VMungo0331G1399 Vigna mungo HOM05D001685 ORTHO05D006653 2.5e-24 116.7 208 38.9
SGA_v2.0_scaffold66G22403 Striga asiatica HOM05D001685 ORTHO05D006653 5.2e-22 109.0 200 38.0
QL08p046190 Quercus lobata HOM05D001685 ORTHO05D006653 2.0e-21 107.1 218 34.4
Mapoly0058s0072 Marchantia polymorpha HOM05D001685 ORTHO05D006653 9.2e-19 98.2 89 52.8
Peaxi162Scf00066g00614 Petunia axillaris HOM05D001685 ORTHO05D006653 1.3e-17 94.4 177 37.9
Peaxi162Scf00179g00125 Petunia axillaris HOM05D001685 ORTHO05D006653 1.3e-17 94.4 177 37.9
Peaxi162Scf00946g00024 Petunia axillaris HOM05D001685 ORTHO05D006653 1.3e-17 94.4 91 50.5
Zm00001eb164640 Zea mays HOM05D001685 ORTHO05D006653 3.3e-16 89.7 234 30.8
CBR_g39640 Chara braunii HOM05D001685 ORTHO05D006653 5.6e-16 89.0 114 38.6
Pp3c5_26480 Physcomitrium patens HOM05D001685 ORTHO05D006653 2.8e-15 86.7 84 50.0
CDE02G4303 Ceratophyllum demersum HOM05D001685 ORTHO05D006653 2.0e-13 80.5 70 55.7
Aa31LG4G9820 Aethionema arabicum HOM05D001685 ORTHO05D006653 2.4e-11 73.6 160 35.6
SMO134G0124 Selaginella moellendorffii HOM05D001685 ORTHO05D006653 1.2e-10 71.2 181 28.7
Cre02.g094650 Chlamydomonas reinhardtii HOM05D001685 ORTHO05D006653 3.0e-09 66.6 210 28.6
AagrBONN_evm.TU.Sc2ySwM_368.2871 Anthoceros agrestis HOM05D001685 ORTHO05D006653 1.5e-08 64.3 89 42.7
unitig_37.g12764 Utricularia gibba HOM05D001685 ORTHO05D006653 3.3e-08 63.2 207 28.5
CAN.G580.1 Capsicum annuum HOM05D001685 ORTHO05D007488 6.8e-06 55.5 63 46.0
Solyc01g067530.3 Solanum lycopersicum HOM05D001685 ORTHO05D007488 6.8e-06 55.5 63 46.0
Sopen01g029480 Solanum pennellii HOM05D001685 ORTHO05D007488 6.8e-06 55.5 63 46.0
Glyma.13G216800 Glycine max HOM05D001685 ORTHO05D007488 8.9e-06 55.1 65 44.6


User provided reference genes

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