Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 2.7e-81 305.4 172 100.0
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 1.1e-34 150.6 167 61.1
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 9.7e-31 137.5 180 51.1
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 1.6e-30 136.7 171 52.0
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 1.1e-29 134.0 158 50.0
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 1.4e-29 133.7 163 49.7
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 5.3e-29 131.7 161 50.3
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 2.0e-28 129.8 171 48.5
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 4.5e-28 128.6 174 47.7
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 5.9e-28 128.3 173 45.7
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.7e-27 126.7 163 52.8
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 3.8e-27 125.6 176 48.9
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.8e-27 125.6 176 48.9
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 5.0e-27 125.2 167 48.5
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 5.0e-27 125.2 167 48.5
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 5.0e-27 125.2 169 53.8
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 1.1e-26 124.0 164 51.8
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.4e-26 123.6 176 48.9
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 1.9e-26 123.2 165 48.5
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 7.2e-26 121.3 174 47.7
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 9.3e-26 120.9 177 50.3
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 9.3e-26 120.9 177 50.3
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 9.3e-26 120.9 177 50.3
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 9.3e-26 120.9 176 47.7
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 1.2e-25 120.6 164 52.4
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 1.6e-25 120.2 177 46.3
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.0e-24 117.5 165 52.1
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 5.1e-24 115.2 163 53.4
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 8.7e-24 114.4 142 54.9
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 1.5e-23 113.6 165 47.3
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 9.7e-23 110.9 170 45.9
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 8.2e-22 107.8 109 57.8
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 8.2e-22 107.8 174 46.0
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 1.1e-21 107.5 174 46.0
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 1.4e-21 107.1 90 63.3
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 1.8e-21 106.7 108 57.4
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 2.4e-21 106.3 137 52.6
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 5.3e-21 105.1 140 47.1
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 9.1e-21 104.4 109 56.9
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 2.0e-20 103.2 161 43.5
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 4.5e-20 102.1 174 48.9
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 7.7e-20 101.3 175 43.4
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 1.3e-19 100.5 160 48.1
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.7e-19 100.1 142 46.5
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 1.7e-19 100.1 142 47.9
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 1.7e-19 100.1 115 54.8
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 1.7e-19 100.1 109 54.1
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 2.9e-19 99.4 164 43.9
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 2.9e-19 99.4 119 53.8
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 2.9e-19 99.4 179 48.0
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 6.5e-19 98.2 180 45.6
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 8.5e-19 97.8 105 54.3
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 1.1e-18 97.4 164 45.7
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 1.1e-18 97.4 168 48.2
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 1.4e-18 97.1 160 45.0
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 1.4e-18 97.1 108 56.5
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 9.4e-18 94.4 156 42.3
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 1.2e-17 94.0 137 48.9
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 1.2e-17 94.0 103 58.3
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 2.1e-17 93.2 174 43.7
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 2.1e-17 93.2 156 42.3
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 2.1e-17 93.2 153 47.1
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 2.7e-17 92.8 102 53.9
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 3.6e-17 92.4 110 50.0
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 3.6e-17 92.4 165 40.0
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 6.1e-17 91.7 96 56.2
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 6.1e-17 91.7 96 56.2
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 1.0e-16 90.9 185 40.0
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 1.0e-16 90.9 147 42.2
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 1.8e-16 90.1 170 42.9
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 2.3e-16 89.7 152 41.4
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 2.3e-16 89.7 124 48.4
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 3.9e-16 89.0 173 41.6
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 3.9e-16 89.0 112 50.0
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 6.7e-16 88.2 98 55.1
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 1.5e-15 87.0 139 42.4
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 2.6e-15 86.3 153 41.8
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 2.6e-15 86.3 163 38.7
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 4.4e-15 85.5 96 61.5
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 1.3e-14 84.0 179 38.5
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 2.2e-14 83.2 173 41.6
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 2.8e-14 82.8 140 49.3
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 3.7e-14 82.4 165 42.4
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 8.2e-14 81.3 118 51.7
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 1.1e-13 80.9 81 59.3
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 1.1e-13 80.9 165 38.8
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 1.4e-13 80.5 179 36.9
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 2.4e-13 79.7 161 40.4
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 3.1e-13 79.3 81 58.0
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 3.1e-13 79.3 138 39.9
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 9.1e-13 77.8 161 39.8
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 9.1e-13 77.8 161 39.8
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 3.4e-12 75.9 173 39.9
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 3.4e-12 75.9 182 38.5
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 3.4e-12 75.9 178 35.4
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 1.1e-10 70.9 71 54.9
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 4.7e-09 65.5 157 37.6
BcaB01g03134 Brassica carinata HOM05D007264 ORTHO05D008639 2.3e-08 63.2 154 41.6
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 8.8e-08 61.2 126 38.9
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 1.3e-06 57.4 169 39.6
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 1.7e-06 57.0 52 57.7


User provided reference genes

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