Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 2.4e-162 575.5 298 100.0
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 4.6e-129 464.9 309 79.0
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 3.3e-127 458.8 305 78.7
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 6.2e-126 454.5 301 77.7
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 1.1e-125 453.8 301 79.4
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 1.1e-125 453.8 306 78.8
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 8.9e-125 450.7 305 78.0
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 1.5e-124 449.9 301 78.1
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 2.6e-124 449.1 305 78.4
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 4.4e-124 448.4 301 77.4
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 1.7e-123 446.4 301 77.4
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 2.9e-123 445.7 302 75.8
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 4.9e-123 444.9 301 77.1
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 1.1e-122 443.7 301 77.4
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 1.1e-122 443.7 301 77.1
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 1.1e-122 443.7 301 76.1
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 5.4e-122 441.4 306 76.1
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 2.1e-121 439.5 301 76.4
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 3.5e-121 438.7 333 71.5
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 3.5e-121 438.7 333 71.5
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 4.6e-121 438.3 301 75.4
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 6.0e-121 438.0 301 75.4
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 6.0e-121 438.0 301 75.1
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 7.8e-121 437.6 301 75.1
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 7.8e-121 437.6 301 75.1
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.7e-120 436.4 301 75.1
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 3.0e-120 435.6 301 74.4
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 3.9e-120 435.3 301 74.8
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 3.9e-120 435.3 307 73.3
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 2.5e-119 432.6 308 73.7
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 3.3e-119 432.2 302 74.8
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 3.3e-119 432.2 301 72.8
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 4.3e-119 431.8 301 73.8
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 5.6e-119 431.4 312 74.0
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 7.3e-119 431.0 301 74.1
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 9.6e-119 430.6 312 73.4
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 9.6e-119 430.6 312 74.4
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 1.2e-118 430.3 306 71.9
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 1.2e-118 430.3 301 73.4
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 1.6e-118 429.9 301 73.4
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 2.8e-118 429.1 301 74.1
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 3.6e-118 428.7 313 72.5
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 3.6e-118 428.7 302 74.5
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 8.1e-118 427.6 302 74.2
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 1.4e-117 426.8 312 72.8
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 5.2e-117 424.9 306 71.6
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 8.9e-117 424.1 314 72.9
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 3.4e-116 422.2 306 73.9
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 4.4e-116 421.8 301 73.4
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 4.4e-116 421.8 301 72.4
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 7.6e-116 421.0 303 73.6
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 7.6e-116 421.0 303 73.6
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 9.9e-116 420.6 306 70.9
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 9.9e-116 420.6 301 72.1
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 1.7e-115 419.9 306 70.3
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 2.9e-115 419.1 278 75.5
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 4.9e-115 418.3 306 69.9
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 4.9e-115 418.3 301 73.4
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 4.9e-115 418.3 310 72.9
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 6.4e-115 417.9 278 75.5
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 6.4e-115 417.9 306 70.6
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 1.1e-114 417.2 306 70.3
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 1.4e-114 416.8 306 70.3
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 1.9e-114 416.4 304 73.0
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 2.4e-114 416.0 301 72.8
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 2.4e-114 416.0 306 70.3
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 2.4e-114 416.0 270 77.0
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 4.2e-114 415.2 306 70.3
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 5.4e-114 414.8 307 69.7
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 7.1e-114 414.5 306 69.0
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 9.3e-114 414.1 305 70.8
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 2.1e-113 412.9 306 69.6
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 2.7e-113 412.5 305 71.5
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 4.6e-113 411.8 307 73.6
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 3.0e-112 409.1 307 70.0
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 3.9e-112 408.7 292 73.6
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 3.9e-112 408.7 306 70.6
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 6.6e-112 407.9 347 63.1
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 1.5e-111 406.8 300 71.0
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 2.5e-111 406.0 335 64.2
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 3.3e-111 405.6 299 68.6
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 1.3e-110 403.7 307 71.3
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 3.6e-110 402.1 305 68.5
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 1.2e-108 397.1 271 72.7
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 1.1e-106 390.6 310 68.4
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 7.1e-106 387.9 321 67.6
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 1.3e-104 383.6 290 67.9
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 2.3e-104 382.9 301 66.8
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 6.2e-102 374.8 306 65.7
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 3.4e-100 369.0 319 63.3
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 7.6e-100 367.9 278 71.2
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 1.7e-99 366.7 320 62.5
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 1.4e-98 363.6 298 66.4
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 1.3e-96 357.1 341 58.7
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 5.1e-88 328.6 272 64.7
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 4.3e-87 325.5 315 56.8
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 9.6e-87 324.3 300 59.3
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.2e-84 317.4 226 73.0
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 6.7e-80 301.6 237 69.2
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 1.6e-78 297.0 233 69.5
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 1.2e-76 290.8 309 53.7
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 1.5e-76 290.4 209 75.1
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 1.1e-74 284.3 201 74.6
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 2.1e-73 280.0 253 61.3
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 5.7e-71 271.9 298 50.3
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 2.7e-57 226.5 192 66.1
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 8.0e-57 224.9 262 46.2
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 8.5e-51 204.9 280 42.1
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 4.4e-47 192.6 313 39.9
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 3.1e-45 186.4 155 67.1
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 4.5e-44 182.6 296 36.8
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 3.7e-38 162.9 245 40.8
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.1e-37 161.4 292 41.8
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 1.2e-33 147.9 239 37.2
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 5.2e-32 142.5 116 66.4
Hma1.2p1_0415F.1_g148000 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 7.0e-29 132.1 88 78.4
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 1.7e-22 110.9 241 34.0
SHI19113 Sapria himalayana HOM05D006582 ORTHO05D008313 2.9e-22 110.2 74 73.0
SHI19111 Sapria himalayana HOM05D006582 ORTHO05D008313 9.5e-18 95.1 101 51.5
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 2.9e-14 83.6 81 58.0
Rhsim03G0115100 Rhododendron simsii HOM05D006582 ORTHO05D023108 3.7e-14 83.2 129 42.6
MD07G1135700 Malus domestica HOM05D006582 ORTHO05D008313 8.9e-08 62.0 79 50.6
SEGI_35321 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 7.6e-07 58.9 60 41.7


User provided reference genes

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