Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G142600 Manihot esculenta HOM05D001544 ORTHO05D005712 4.9e-109 397.9 212 100.0
Manes.02G100900 Manihot esculenta HOM05D001544 ORTHO05D005712 3.2e-76 288.9 216 72.2
Potri.005G117400 Populus trichocarpa HOM05D001544 ORTHO05D005712 6.2e-72 274.6 186 74.2
Potri.007G016200 Populus trichocarpa HOM05D001544 ORTHO05D005712 1.2e-70 270.4 221 68.3
Cpa.g.sc6.211 Carica papaya HOM05D001544 ORTHO05D005712 3.7e-64 248.8 185 71.4
QL06p034007 Quercus lobata HOM05D001544 ORTHO05D005712 4.1e-63 245.4 181 68.5
Nn5g29207 Nelumbo nucifera HOM05D001544 ORTHO05D002732 3.4e-62 242.3 178 69.7
Dinv40055 Davidia involucrata HOM05D001544 ORTHO05D005712 6.5e-61 238.0 207 62.3
THA.LOC104821318 Tarenaya hassleriana HOM05D001544 ORTHO05D005712 1.8e-58 229.9 181 63.5
Sc03g0003410 Simmondsia chinensis HOM05D001544 ORTHO05D005712 1.5e-57 226.9 179 65.9
CiPaw.07G055800 Carya illinoinensis HOM05D001544 ORTHO05D005712 5.7e-57 224.9 220 58.6
TAR625G1395 Trochodendron aralioides HOM05D001544 ORTHO05D005712 5.7e-57 224.9 206 58.3
Carub.0005s1750 Capsella rubella HOM05D001544 ORTHO05D005712 3.7e-56 222.2 181 63.0
GSVIVG01024183001 Vitis vinifera HOM05D001544 ORTHO05D005712 1.4e-55 220.3 190 61.1
Hund14027 Selenicereus undatus HOM05D001544 ORTHO05D005712 2.4e-55 219.5 216 56.0
AL5G31520 Arabidopsis lyrata HOM05D001544 ORTHO05D005712 1.2e-54 217.2 213 54.9
CARHR160690 Cardamine hirsuta HOM05D001544 ORTHO05D005712 2.0e-54 216.5 184 60.9
QL11p046076 Quercus lobata HOM05D001544 ORTHO05D005712 2.6e-54 216.1 180 63.3
AT3G51100 Arabidopsis thaliana HOM05D001544 ORTHO05D005712 7.7e-54 214.5 213 54.9
Hma1.2p1_0266F.1_g106940 Hydrangea macrophylla HOM05D001544 ORTHO05D005712 1.0e-53 214.2 171 62.6
HanXRQChr13g0414781 Helianthus annuus HOM05D001544 ORTHO05D005712 6.5e-53 211.5 179 60.9
Aqoxy5G01497 Aquilegia oxysepala HOM05D001544 ORTHO05D005712 1.9e-52 209.9 179 60.3
RcHm_v2.0_Chr2g0099951 Rosa chinensis HOM05D001544 ORTHO05D005712 2.5e-52 209.5 181 60.2
Sp5g11110 Schrenkiella parvula HOM05D001544 ORTHO05D005712 2.5e-52 209.5 191 58.1
Aa31LG4G19200 Aethionema arabicum HOM05D001544 ORTHO05D005712 7.2e-52 208.0 187 57.2
CsaV3_2G015260 Cucumis sativus L. HOM05D001544 ORTHO05D005712 9.4e-52 207.6 180 60.0
CSS0013177 Camellia sinensis var. sinensis HOM05D001544 ORTHO05D005712 1.6e-51 206.8 177 62.7
Migut.L00036 Erythranthe guttata HOM05D001544 ORTHO05D005712 1.6e-51 206.8 210 51.4
Thhalv10010713m.g Eutrema salsugineum HOM05D001544 ORTHO05D005712 2.7e-51 206.1 187 57.2
Nitab4.5_0010830g0030 Nicotiana tabacum HOM05D001544 ORTHO05D005712 3.6e-51 205.7 179 61.5
Lsat_1_v5_gn_2_78361 Lactuca sativa HOM05D001544 ORTHO05D005712 4.6e-51 205.3 208 53.4
MELO3C023351.2 Cucumis melo HOM05D001544 ORTHO05D005712 6.1e-51 204.9 180 59.4
Eucgr.G01724 Eucalyptus grandis HOM05D001544 ORTHO05D005712 1.0e-50 204.1 179 59.2
BcaC06g33056 Brassica carinata HOM05D001544 ORTHO05D005712 2.3e-50 203.0 217 52.1
C07p46160 Brassica napus HOM05D001544 ORTHO05D005712 2.3e-50 203.0 217 52.1
BolC7t45132H Brassica oleracea HOM05D001544 ORTHO05D005712 2.3e-50 203.0 217 52.1
A03p48120 Brassica napus HOM05D001544 ORTHO05D005712 3.0e-50 202.6 217 52.1
BraA03t13919Z Brassica rapa HOM05D001544 ORTHO05D005712 3.0e-50 202.6 217 52.1
Gohir.D02G220200 Gossypium hirsutum HOM05D001544 ORTHO05D005712 1.5e-49 200.3 180 59.4
Gorai.005G248100 Gossypium raimondii HOM05D001544 ORTHO05D005712 1.5e-49 200.3 180 59.4
Sed0017058 Sechium edule HOM05D001544 ORTHO05D005712 2.0e-49 199.9 183 59.0
MD10G1064100 Malus domestica HOM05D001544 ORTHO05D005712 3.3e-49 199.1 179 58.7
HanXRQChr14g0441601 Helianthus annuus HOM05D001544 ORTHO05D005712 4.3e-49 198.7 179 60.3
Atru.chr5.3135 Acer truncatum HOM05D001544 ORTHO05D005712 7.4e-49 198.0 191 55.5
Duzib132G0442 Durio zibethinus HOM05D001544 ORTHO05D005712 7.4e-49 198.0 211 55.9
Prupe.8G085800 Prunus persica HOM05D001544 ORTHO05D005712 7.4e-49 198.0 179 58.1
Nitab4.5_0000753g0030 Nicotiana tabacum HOM05D001544 ORTHO05D005712 1.3e-48 197.2 179 60.3
Gohir.A03G198800 Gossypium hirsutum HOM05D001544 ORTHO05D005712 1.7e-48 196.8 180 58.9
Thecc.02G076200 Theobroma cacao HOM05D001544 ORTHO05D005712 2.2e-48 196.4 181 58.0
Rhsim10G0214300 Rhododendron simsii HOM05D001544 ORTHO05D005712 3.7e-48 195.7 219 50.7
Oeu021945.1 Olea europaea HOM05D001544 ORTHO05D005712 6.3e-48 194.9 183 56.3
Haze_03811 Corylus avellana HOM05D001544 ORTHO05D005712 8.2e-48 194.5 240 49.6
Ciclev10029261m.g Citrus clementina HOM05D001544 ORTHO05D005712 1.4e-47 193.7 185 57.3
Sabra05G0096400 Salix brachista HOM05D001544 ORTHO05D005712 1.8e-47 193.4 215 53.0
PGSC0003DMG401022539 Solanum tuberosum HOM05D001544 ORTHO05D005712 1.8e-47 193.4 179 56.4
DCAR_025988 Daucus carota HOM05D001544 ORTHO05D005712 2.4e-47 193.0 179 54.7
MSTRG.23282 Avicennia marina HOM05D001544 ORTHO05D005712 3.1e-47 192.6 180 56.7
Sed0002010 Sechium edule HOM05D001544 ORTHO05D005712 4.1e-47 192.2 183 55.2
ClCG11G003920 Citrullus lanatus HOM05D001544 ORTHO05D005712 5.3e-47 191.8 180 58.9
PGR042G1893 Punica granatum HOM05D001544 ORTHO05D005712 9.1e-47 191.0 177 55.9
SEGI_21342 Sequoiadendron giganteum HOM05D001544 ORTHO05D005712 1.5e-46 190.3 179 56.4
Solyc03g033650.3 Solanum lycopersicum HOM05D001544 ORTHO05D005712 2.6e-46 189.5 178 55.1
MD02G1135800 Malus domestica HOM05D001544 ORTHO05D005712 3.4e-46 189.1 181 54.7
TWI75G0115 Tripterygium wilfordii HOM05D001544 ORTHO05D005712 4.5e-46 188.7 180 55.6
CiPaw.06G128900 Carya illinoinensis HOM05D001544 ORTHO05D005712 5.9e-46 188.3 180 56.7
Sopen03g006440 Solanum pennellii HOM05D001544 ORTHO05D005712 5.9e-46 188.3 178 55.1
TWI79G0125 Tripterygium wilfordii HOM05D001544 ORTHO05D005712 5.9e-46 188.3 214 50.5
CANSAT11G1780 Cannabis sativa HOM05D001544 ORTHO05D005712 7.7e-46 188.0 187 56.1
Prupe.7G164800 Prunus persica HOM05D001544 ORTHO05D005712 7.7e-46 188.0 179 53.6
Cfa005097 Carpinus fangiana HOM05D001544 ORTHO05D005712 1.0e-45 187.6 180 57.2
Sabra07G0013400 Salix brachista HOM05D001544 ORTHO05D005712 2.2e-45 186.4 265 44.5
PSO210G7387 Papaver somniferum HOM05D001544 ORTHO05D005712 5.0e-45 185.3 182 52.2
CSS0007563 Camellia sinensis var. sinensis HOM05D001544 ORTHO05D005712 3.2e-44 182.6 157 61.1
ECA238G2610 Erigeron canadensis HOM05D002906 ORTHO05D003211 1.2e-43 180.6 169 54.4
MD15G1249400 Malus domestica HOM05D001544 ORTHO05D005712 3.6e-43 179.1 181 53.0
Os06g0713900 Oryza sativa ssp. japonica HOM05D001544 ORTHO05D005712 7.9e-43 177.9 179 53.1
SalBow8G0407 Salvia bowleyana HOM05D001544 ORTHO05D005712 1.8e-42 176.8 187 49.2
Lalb_Chr01g0002161 Lupinus albus HOM05D001544 ORTHO05D005712 2.3e-42 176.4 180 54.4
PSO675G4981 Papaver somniferum HOM05D001544 ORTHO05D005712 3.0e-42 176.0 204 47.5
RcHm_v2.0_Chr6g0267511 Rosa chinensis HOM05D001544 ORTHO05D005712 5.1e-42 175.3 170 53.5
SGA_v2.0_scaffold51G18782 Striga asiatica HOM05D001544 ORTHO05D005712 5.1e-42 175.3 179 52.5
PGSC0003DMG402003620 Solanum tuberosum HOM05D001544 ORTHO05D005712 6.7e-42 174.9 179 52.5
Lj3g0003276 Lotus japonicus HOM05D001544 ORTHO05D005712 8.8e-42 174.5 184 52.7
Psat7g226160 Pisum sativum HOM05D001544 ORTHO05D005712 8.8e-42 174.5 184 52.2
Solyc02g084550.3 Solanum lycopersicum HOM05D001544 ORTHO05D005712 1.5e-41 173.7 179 53.1
Cfa006938 Carpinus fangiana HOM05D001544 ORTHO05D005712 2.0e-41 173.3 140 65.0
Medtr4g032740 Medicago truncatula HOM05D001544 ORTHO05D005712 2.6e-41 172.9 184 54.3
PSO541G2534 Papaver somniferum HOM05D001544 ORTHO05D005712 4.4e-41 172.2 204 47.1
Migut.H02483 Erythranthe guttata HOM05D001544 ORTHO05D005712 5.7e-41 171.8 171 51.5
Sopen02g029220 Solanum pennellii HOM05D001544 ORTHO05D005712 4.8e-40 168.7 179 51.4
SGA_v2.0_scaffold2G01246 Striga asiatica HOM05D001544 ORTHO05D005712 4.8e-40 168.7 201 48.8
THA.LOC104826761 Tarenaya hassleriana HOM05D001544 ORTHO05D005712 4.8e-40 168.7 181 49.7
FvH4_2g10310 Fragaria vesca HOM05D001544 ORTHO05D005712 6.3e-40 168.3 170 51.8
TPR.G34176 Trifolium pratense HOM05D001544 ORTHO05D005712 6.3e-40 168.3 179 53.1
Phvul.011G039500 Phaseolus vulgaris HOM05D001544 ORTHO05D005712 8.2e-40 167.9 170 54.1
FAN15G2093 Fragaria x ananassa HOM05D001544 ORTHO05D005712 1.1e-39 167.5 170 51.8
arahy.Tifrunner.gnm1.ann1.3WL649 Arachis hypogaea HOM05D001544 ORTHO05D005712 2.4e-39 166.4 191 48.2
FAN20G3124 Fragaria x ananassa HOM05D001544 ORTHO05D005712 3.1e-39 166.0 174 50.6
Glyma.11G111600 Glycine max HOM05D001544 ORTHO05D005712 5.3e-39 165.2 170 52.9
Aqoxy6G02390 Aquilegia oxysepala HOM05D001544 ORTHO05D005712 1.2e-38 164.1 179 48.6
Thecc.01G023700 Theobroma cacao HOM05D001544 ORTHO05D005712 1.2e-38 164.1 168 54.8
Zm00001eb227920 Zea mays HOM05D001544 ORTHO05D005712 1.2e-38 164.1 207 49.8
FAN24G0484 Fragaria x ananassa HOM05D001544 ORTHO05D005712 2.6e-38 162.9 195 46.7
Peaxi162Scf00010g00610 Petunia axillaris HOM05D001544 ORTHO05D005712 4.5e-38 162.2 178 50.6
Cc07_g10380 Coffea canephora HOM05D001544 ORTHO05D005712 3.2e-36 156.0 149 57.7
Gorai.007G197500 Gossypium raimondii HOM05D001544 ORTHO05D005712 9.4e-36 154.5 177 49.2
Gohir.A11G178100 Gossypium hirsutum HOM05D001544 ORTHO05D005712 1.2e-35 154.1 177 49.2
Glyma.01G006900 Glycine max HOM05D001544 ORTHO05D005712 1.6e-35 153.7 171 50.3
vmacro22095 Vaccinium macrocarpon HOM05D001544 ORTHO05D005712 1.6e-35 153.7 225 43.6
Zm00001eb103400 Zea mays HOM05D001544 ORTHO05D005712 2.7e-35 152.9 207 43.5
Gohir.D11G185900 Gossypium hirsutum HOM05D001544 ORTHO05D005712 4.7e-35 152.1 177 49.2
unitig_0.g2167 Utricularia gibba HOM05D001544 ORTHO05D005712 8.0e-35 151.4 216 44.0
EL10As8g23856 Beta vulgaris HOM05D001544 ORTHO05D005712 1.0e-34 151.0 285 39.3
Lj3g0002354 Lotus japonicus HOM05D001544 ORTHO05D005712 1.0e-34 151.0 180 47.2
Oeu037732.1 Olea europaea HOM05D001544 ORTHO05D005712 1.8e-34 150.2 135 63.0
FAN23G1654 Fragaria x ananassa HOM05D002906 ORTHO05D003211 2.0e-33 146.7 181 48.1
FAN26G2191 Fragaria x ananassa HOM05D001544 ORTHO05D005712 3.3e-33 146.0 181 47.5
FAN28G0278 Fragaria x ananassa HOM05D001544 ORTHO05D005712 4.4e-33 145.6 181 47.5
VMungo1127G0458 Vigna mungo HOM05D001544 ORTHO05D005712 1.7e-32 143.7 169 46.2
MBI14_g19731_MAGBIO Magnolia biondii HOM05D001544 ORTHO05D005712 1.4e-31 140.6 176 46.0
vmacro21904 Vaccinium macrocarpon HOM05D001544 ORTHO05D005712 4.1e-31 139.0 139 53.2
HPP92_022282 Vanilla planifolia HOM05D001544 ORTHO05D005712 5.3e-31 138.7 138 52.9
Rhsim08G0035500 Rhododendron simsii HOM05D001544 ORTHO05D005712 9.1e-31 137.9 157 49.7
FvH4_1g12190 Fragaria vesca HOM05D001544 ORTHO05D005712 3.5e-30 136.0 141 51.8
CARHR160680 Cardamine hirsuta HOM05D001544 ORTHO05D005712 2.9e-29 132.9 186 42.5
Lj4A214G24 Lonicera japonica HOM05D001544 ORTHO05D005712 2.9e-29 132.9 150 58.0
Thecc.01G023500 Theobroma cacao HOM05D001544 ORTHO05D005712 1.5e-28 130.6 139 52.5
Mapoly0074s0044 Marchantia polymorpha HOM05D001544 ORTHO05D005712 1.9e-28 130.2 184 42.4
Dinv42006 Davidia involucrata HOM05D001544 ORTHO05D002732 7.2e-28 128.3 170 48.2
Dinv23461 Davidia involucrata HOM05D001544 ORTHO05D005712 4.7e-27 125.6 150 52.0
CDE12G0819 Ceratophyllum demersum HOM05D001544 ORTHO05D002732 4.0e-26 122.5 148 47.3
PSO170G3698 Papaver somniferum HOM05D001544 ORTHO05D005712 4.0e-26 122.5 116 54.3
Lalb_Chr19g0138931 Lupinus albus HOM05D001544 ORTHO05D005712 1.2e-25 120.9 149 47.7
Dinv33599 Davidia involucrata HOM05D001544 ORTHO05D005712 1.5e-25 120.6 124 63.7
arahy.Tifrunner.gnm1.ann1.3TM7ML Arachis hypogaea HOM05D001544 ORTHO05D005712 7.5e-25 118.2 149 43.6
Ca_19707_v3 Cicer arietinum L. HOM05D001544 ORTHO05D005712 9.8e-25 117.9 151 48.3
SMO361G0705 Selaginella moellendorffii HOM05D001544 ORTHO05D005712 2.2e-24 116.7 175 38.3
Os09g0530700 Oryza sativa ssp. japonica HOM05D001544 ORTHO05D005712 7.7e-22 108.2 117 49.6
SMO004G0024 Selaginella moellendorffii HOM05D001544 ORTHO05D005712 5.0e-21 105.5 194 36.1
TAR381G0232 Trochodendron aralioides HOM05D001544 ORTHO05D005712 5.0e-21 105.5 101 55.4
FAN23G2664 Fragaria x ananassa HOM05D001544 ORTHO05D005712 1.9e-20 103.6 142 45.1
Zm00001eb319500 Zea mays HOM05D001544 ORTHO05D005712 4.2e-20 102.4 137 43.8
arahy.Tifrunner.gnm1.ann1.N6BS4T Arachis hypogaea HOM05D001544 ORTHO05D005712 1.6e-19 100.5 91 54.9
Pp3c3_3130 Physcomitrium patens HOM05D001544 ORTHO05D005712 3.6e-19 99.4 194 31.4
Pp3c26_11470 Physcomitrium patens HOM05D001544 ORTHO05D005712 6.1e-19 98.6 191 31.9
Pp3c14_16330 Physcomitrium patens HOM05D001544 ORTHO05D005712 8.8e-18 94.7 172 37.2
Actinidia23006 Actinidia chinensis HOM05D001544 ORTHO05D005712 4.4e-17 92.4 62 69.4
MBI14_g19737_MAGBIO Magnolia biondii HOM05D001544 ORTHO05D005712 2.8e-16 89.7 76 56.6
AagrBONN_evm.TU.Sc2ySwM_362.490 Anthoceros agrestis HOM05D001544 ORTHO05D005712 3.7e-16 89.4 135 40.7
PSO675G0307 Papaver somniferum HOM05D001544 ORTHO05D005712 3.7e-16 89.4 109 43.1
MBI14_g19736_MAGBIO Magnolia biondii HOM05D001544 ORTHO05D005712 1.6e-14 84.0 57 68.4
TAR626G0405 Trochodendron aralioides HOM05D000010 ORTHO05D016350 5.2e-10 68.9 42 73.8
COL.COLO4_21965 Corchorus olitorius HOM05D002906 ORTHO05D003211 5.9e-06 55.5 53 62.3


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