Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 1.5e-247 859.0 412 100.0
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 1.3e-179 633.3 397 76.6
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 3.8e-174 615.1 395 73.2
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 7.9e-172 607.4 404 70.8
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 3.0e-171 605.5 403 70.7
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 3.7e-169 598.6 404 69.3
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 6.9e-168 594.3 396 71.2
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 1.5e-167 593.2 415 68.4
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 1.7e-166 589.7 402 70.6
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 2.9e-166 589.0 407 68.3
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 5.0e-166 588.2 405 69.1
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 3.2e-165 585.5 400 70.0
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 3.5e-164 582.0 401 69.1
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 3.5e-164 582.0 399 67.2
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 1.5e-162 576.6 401 66.6
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 1.5e-162 576.6 398 66.6
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 2.8e-161 572.4 401 66.1
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 4.8e-161 571.6 415 67.7
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 1.1e-160 570.5 401 65.8
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 1.1e-160 570.5 403 67.5
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 1.1e-160 570.5 401 66.6
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 5.3e-160 568.2 399 67.2
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 9.0e-160 567.4 430 63.0
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 1.2e-159 567.0 410 65.1
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 1.2e-159 567.0 401 66.1
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 2.0e-159 566.2 399 64.9
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 1.3e-158 563.5 406 65.8
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 3.8e-158 562.0 424 65.6
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 6.5e-158 561.2 398 64.3
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 2.5e-157 559.3 396 67.4
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 2.5e-157 559.3 388 67.0
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 2.5e-157 559.3 398 64.8
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 3.2e-157 558.9 397 68.0
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 7.2e-157 557.8 454 61.9
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 1.2e-156 557.0 420 64.0
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 1.2e-156 557.0 403 65.3
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 4.6e-156 555.1 407 65.8
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 6.1e-156 554.7 408 63.5
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 6.1e-156 554.7 406 64.5
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 1.8e-155 553.1 398 63.8
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 2.3e-155 552.7 401 65.3
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 5.1e-155 551.6 404 64.4
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 5.1e-155 551.6 401 65.1
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 6.7e-155 551.2 389 65.8
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 8.8e-155 550.8 398 65.8
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 1.1e-154 550.4 399 66.4
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 1.5e-154 550.1 361 72.9
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 2.0e-154 549.7 387 68.0
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 2.0e-154 549.7 387 68.0
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 2.5e-154 549.3 398 66.3
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 4.3e-154 548.5 381 68.2
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 7.4e-154 547.7 414 65.2
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 2.8e-153 545.8 411 64.7
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 6.3e-153 544.7 401 65.6
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 6.3e-153 544.7 408 62.0
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 1.1e-152 543.9 400 65.2
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 6.9e-152 541.2 393 65.1
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 1.2e-151 540.4 406 62.8
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 2.2e-150 536.2 407 63.6
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 2.9e-150 535.8 394 63.7
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 5.0e-150 535.0 390 64.9
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 6.5e-150 534.6 422 61.8
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 8.5e-150 534.3 431 60.3
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 1.4e-149 533.5 410 61.5
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 1.8e-147 526.6 399 61.9
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.3e-147 526.2 409 64.8
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 3.9e-147 525.4 397 63.2
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 9.7e-146 520.8 399 64.2
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 2.0e-143 513.1 414 61.1
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 3.5e-143 512.3 399 61.9
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 5.0e-142 508.4 395 61.3
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 1.2e-140 503.8 364 65.9
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 6.3e-137 491.5 456 54.2
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 9.1e-136 487.6 403 60.5
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 8.0e-132 474.6 393 59.5
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 3.0e-131 472.6 452 53.8
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 1.2e-130 470.7 392 57.9
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 1.3e-129 467.2 345 63.8
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 3.1e-128 462.6 351 63.2
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 1.5e-125 453.8 423 54.4
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 4.2e-125 452.2 398 56.8
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 1.8e-120 436.8 348 60.1
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 2.9e-118 429.5 358 57.5
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 2.5e-117 426.4 317 65.3
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.8e-115 420.2 341 60.4
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.3e-115 419.9 409 55.7
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 9.5e-109 397.9 289 66.1
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 1.2e-108 397.5 361 55.1
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 1.4e-104 384.0 396 49.2
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 2.8e-92 343.2 255 65.5
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 8.9e-91 338.2 434 46.1
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 1.7e-89 334.0 212 69.8
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 1.9e-88 330.5 390 44.4
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 3.0e-86 323.2 252 62.3
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 2.8e-84 316.6 252 60.3
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 6.2e-84 315.5 335 48.1
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 1.1e-80 304.7 347 45.0
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 3.9e-78 296.2 392 43.6
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 1.6e-76 290.8 374 40.1
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 4.0e-75 286.2 350 42.6
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 4.9e-73 279.3 398 40.2
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 4.2e-72 276.2 176 69.9
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 6.0e-63 245.7 212 56.1
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 5.1e-62 242.7 187 63.1
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 9.6e-61 238.4 212 53.8
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 2.0e-58 230.7 212 55.2
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 1.0e-54 218.4 222 51.8
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 1.0e-49 201.8 309 40.1
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 1.6e-44 184.5 297 40.7
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 3.7e-44 183.3 141 63.1
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 1.4e-40 171.4 100 75.0
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 1.4e-40 171.4 148 56.1
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 2.7e-39 167.2 119 63.0
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 6.1e-31 139.4 107 60.7
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 1.8e-27 127.9 117 53.0
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 2.0e-26 124.4 134 44.8
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 2.2e-20 104.4 107 49.5
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 4.2e-16 90.1 87 50.6
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 9.5e-08 62.4 42 73.8


User provided reference genes

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