Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 6.9e-66 254.2 168 100.0
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 3.0e-37 159.1 165 73.3
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 4.0e-37 158.7 165 73.3
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 7.5e-36 154.5 165 74.5
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 1.3e-35 153.7 166 73.5
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 2.2e-35 152.9 165 70.9
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 4.8e-35 151.8 164 70.7
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 6.3e-35 151.4 166 71.7
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 6.3e-35 151.4 166 72.3
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 6.3e-35 151.4 165 72.1
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 6.3e-35 151.4 165 72.1
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 6.3e-35 151.4 165 73.3
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 8.2e-35 151.0 165 72.1
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 9.1e-34 147.5 165 70.9
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 2.0e-33 146.4 165 70.3
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 7.7e-33 144.4 165 70.9
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 1.7e-32 143.3 166 70.5
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 2.2e-32 142.9 165 71.5
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 3.8e-32 142.1 167 68.9
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 5.0e-32 141.7 167 69.5
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 6.5e-32 141.4 165 67.3
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 8.5e-32 141.0 169 69.8
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 1.5e-31 140.2 132 81.1
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 1.9e-31 139.8 165 66.7
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 3.2e-31 139.0 167 68.3
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 3.2e-31 139.0 167 68.3
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 3.2e-31 139.0 164 67.7
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 3.2e-31 139.0 165 66.1
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 3.2e-31 139.0 134 79.1
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 4.2e-31 138.7 165 70.3
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 5.5e-31 138.3 165 67.3
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 9.4e-31 137.5 164 68.3
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 9.4e-31 137.5 166 68.7
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 1.2e-30 137.1 166 69.9
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 1.6e-30 136.7 168 67.9
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 2.1e-30 136.3 166 69.3
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 4.7e-30 135.2 165 69.7
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 8.0e-30 134.4 167 66.5
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 1.0e-29 134.0 165 70.9
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 1.0e-29 134.0 168 69.0
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 1.0e-29 134.0 166 66.9
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 1.4e-29 133.7 165 69.1
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 1.8e-29 133.3 134 78.4
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 1.8e-29 133.3 172 66.9
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 3.0e-29 132.5 170 67.1
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 4.0e-29 132.1 165 65.5
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 5.2e-29 131.7 168 67.3
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 5.2e-29 131.7 166 67.5
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 1.2e-28 130.6 165 68.5
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 1.2e-28 130.6 132 77.3
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 1.2e-28 130.6 132 78.0
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 1.5e-28 130.2 165 67.3
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 1.5e-28 130.2 171 64.9
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 2.6e-28 129.4 115 86.1
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 2.6e-28 129.4 115 86.1
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 3.4e-28 129.0 168 66.1
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 4.4e-28 128.6 165 67.3
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 4.4e-28 128.6 165 67.3
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 4.4e-28 128.6 169 67.5
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 4.4e-28 128.6 112 83.0
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 5.7e-28 128.3 171 64.9
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 5.7e-28 128.3 167 65.3
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 7.5e-28 127.9 167 64.1
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 1.3e-27 127.1 171 65.5
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 1.7e-27 126.7 127 81.9
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 2.2e-27 126.3 164 67.1
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 2.8e-27 125.9 166 65.7
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 1.4e-26 123.6 140 75.0
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 1.8e-26 123.2 133 76.7
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 2.4e-26 122.9 140 70.0
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 4.1e-26 122.1 165 65.5
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 9.1e-26 120.9 129 76.0
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 1.2e-25 120.6 165 67.9
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 1.6e-25 120.2 127 58.3
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 2.0e-25 119.8 101 63.4
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 4.5e-25 118.6 165 63.0
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.7e-24 116.7 120 79.2
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 2.9e-24 115.9 127 78.7
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.9e-24 115.9 113 78.8
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 5.0e-24 115.2 170 60.0
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 1.1e-23 114.0 127 74.8
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 4.2e-23 112.1 128 47.7
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 7.2e-23 111.3 101 59.4
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 7.2e-23 111.3 166 62.7
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 1.6e-22 110.2 162 66.0
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 2.1e-22 109.8 158 63.3
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 2.7e-22 109.4 110 81.8
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 3.6e-22 109.0 113 79.6
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 4.7e-22 108.6 127 60.6
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 1.4e-21 107.1 163 52.1
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 3.7e-19 99.0 118 72.9
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 1.4e-18 97.1 124 69.4
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 4.1e-18 95.5 131 69.5
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 2.7e-17 92.8 101 53.5
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 8.6e-16 87.8 164 57.9
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 2.8e-14 82.8 119 63.0
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 1.4e-13 80.5 100 44.0
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 2.3e-13 79.7 89 68.5
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 2.6e-12 76.3 128 39.8
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 1.8e-10 70.1 65 53.8
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 5.4e-10 68.6 52 63.5
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 1.6e-09 67.0 119 62.2


User provided reference genes

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