Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G129800 Manihot esculenta HOM05D007438 ORTHO05D009395 1.6e-132 476.1 235 100.0
GSVIVG01020783001 Vitis vinifera HOM05D007438 ORTHO05D009395 5.9e-63 245.0 254 54.3
Thecc.01G156400 Theobroma cacao HOM05D007438 ORTHO05D009395 9.7e-58 227.6 251 54.2
TAR629G3405 Trochodendron aralioides HOM05D007438 ORTHO05D009395 1.3e-57 227.3 254 51.2
Glyma.02G288700 Glycine max HOM05D007438 ORTHO05D009395 3.7e-57 225.7 254 49.2
Medtr5g091960 Medicago truncatula HOM05D007438 ORTHO05D009395 6.3e-57 224.9 253 50.6
Glyma.14G026100 Glycine max HOM05D007438 ORTHO05D009395 3.1e-56 222.6 254 49.6
TPR.G12671 Trifolium pratense HOM05D007438 ORTHO05D009395 4.1e-56 222.2 253 49.0
Sabra14G0106800 Salix brachista HOM05D007438 ORTHO05D009395 9.1e-56 221.1 263 52.1
Duzib264G0748 Durio zibethinus HOM05D007438 ORTHO05D009395 1.2e-55 220.7 256 51.2
COL.COLO4_33655 Corchorus olitorius HOM05D007438 ORTHO05D009395 1.5e-55 220.3 258 51.2
Cfa021395 Carpinus fangiana HOM05D007438 ORTHO05D009395 2.0e-55 219.9 297 46.1
Potri.014G141500 Populus trichocarpa HOM05D007438 ORTHO05D009395 2.6e-55 219.5 263 51.7
Ca_06297_v3 Cicer arietinum L. HOM05D007438 ORTHO05D009395 7.7e-55 218.0 254 48.4
Cpa.g.sc50.57 Carica papaya HOM05D007438 ORTHO05D009395 2.9e-54 216.1 288 45.5
LjContig00310g0012276 Lotus japonicus HOM05D007438 ORTHO05D009395 2.1e-52 209.9 252 47.6
Gohir.A09G003800 Gossypium hirsutum HOM05D007438 ORTHO05D009395 7.9e-52 208.0 257 49.0
Gorai.006G004700 Gossypium raimondii HOM05D007438 ORTHO05D009395 1.8e-51 206.8 257 49.0
Gohir.D09G003400 Gossypium hirsutum HOM05D007438 ORTHO05D009395 2.3e-51 206.5 257 49.0
Peaxi162Scf00154g01024 Petunia axillaris HOM05D007438 ORTHO05D009395 3.0e-51 206.1 252 49.6
PGR042G1218 Punica granatum HOM05D007438 ORTHO05D009395 3.9e-51 205.7 256 46.9
arahy.Tifrunner.gnm1.ann1.2XI8FI Arachis hypogaea HOM05D007438 ORTHO05D009395 5.1e-51 205.3 264 46.6
arahy.Tifrunner.gnm1.ann1.9R49YU Arachis hypogaea HOM05D007438 ORTHO05D009395 5.1e-51 205.3 264 46.6
VMungo1215G1664 Vigna mungo HOM05D007438 ORTHO05D009395 6.7e-51 204.9 244 48.0
CSS0040852 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 8.8e-51 204.5 260 49.6
CSS0044063 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 8.8e-51 204.5 260 49.6
Ciclev10016256m.g Citrus clementina HOM05D007438 ORTHO05D009395 3.3e-50 202.6 264 50.0
Eucgr.A01949 Eucalyptus grandis HOM05D007438 ORTHO05D009395 5.7e-50 201.8 246 47.6
Rhsim04G0081300 Rhododendron simsii HOM05D007438 ORTHO05D009395 1.7e-49 200.3 263 47.9
Lalb_Chr10g0106871 Lupinus albus HOM05D007438 ORTHO05D009395 3.7e-49 199.1 253 46.2
CAN.G803.12 Capsicum annuum HOM05D007438 ORTHO05D009395 4.8e-49 198.7 254 47.6
MBI06_g16570_MAGBIO Magnolia biondii HOM05D007438 ORTHO05D009395 1.8e-48 196.8 261 44.8
CiPaw.03G193300 Carya illinoinensis HOM05D007438 ORTHO05D009395 3.1e-48 196.1 294 42.2
vmacro09194 Vaccinium macrocarpon HOM05D007438 ORTHO05D009395 5.3e-48 195.3 258 48.4
Dinv11426 Davidia involucrata HOM05D007438 ORTHO05D009395 2.0e-47 193.4 267 46.4
MSTRG.6772 Avicennia marina HOM05D007438 ORTHO05D009395 2.6e-47 193.0 253 45.5
Nitab4.5_0003133g0060 Nicotiana tabacum HOM05D007438 ORTHO05D009395 1.0e-46 191.0 244 45.9
ClCG09G022220 Citrullus lanatus HOM05D007438 ORTHO05D009395 1.3e-46 190.7 246 48.0
QL08p043052 Quercus lobata HOM05D007438 ORTHO05D009395 1.3e-46 190.7 284 41.9
Actinidia30518 Actinidia chinensis HOM05D007438 ORTHO05D009395 3.8e-46 189.1 262 46.2
Cc05_g09010 Coffea canephora HOM05D007438 ORTHO05D009395 3.8e-46 189.1 264 44.7
Nn3g21054 Nelumbo nucifera HOM05D007438 ORTHO05D009395 3.8e-46 189.1 263 44.1
MELO3C014451.2 Cucumis melo HOM05D007438 ORTHO05D009395 6.5e-46 188.3 246 47.2
PGSC0003DMG401017288 Solanum tuberosum HOM05D007438 ORTHO05D009395 6.5e-46 188.3 254 46.1
Solyc07g055720.4 Solanum lycopersicum HOM05D007438 ORTHO05D009395 1.1e-45 187.6 253 44.7
Sopen07g029090 Solanum pennellii HOM05D007438 ORTHO05D009395 1.5e-45 187.2 255 44.3
Psat2g015640 Pisum sativum HOM05D007438 ORTHO05D009395 3.2e-45 186.0 256 45.3
DCAR_013288 Daucus carota HOM05D007438 ORTHO05D009395 4.2e-45 185.7 264 44.3
Sed0004780 Sechium edule HOM05D007438 ORTHO05D009395 9.4e-45 184.5 246 47.2
Aqoxy1G01934 Aquilegia oxysepala HOM05D007438 ORTHO05D009395 1.6e-44 183.7 261 43.7
Lj3C1012T3 Lonicera japonica HOM05D007438 ORTHO05D009395 6.1e-44 181.8 268 44.8
CSS0035465 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 1.0e-43 181.0 279 44.4
AUR62031789 Chenopodium quinoa HOM05D007438 ORTHO05D009395 1.8e-43 180.3 263 39.9
Phvul.008G264700 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 2.3e-43 179.9 253 42.3
TWI74G0447 Tripterygium wilfordii HOM05D007438 ORTHO05D009395 1.1e-42 177.6 251 47.4
CsaV3_6G037900 Cucumis sativus L. HOM05D007438 ORTHO05D009395 1.5e-42 177.2 246 45.1
Migut.M00210 Erythranthe guttata HOM05D007438 ORTHO05D009395 1.5e-42 177.2 240 45.0
AUR62023994 Chenopodium quinoa HOM05D007438 ORTHO05D009395 2.6e-42 176.4 265 39.2
Atru.chr6.3569 Acer truncatum HOM05D007438 ORTHO05D009395 4.4e-42 175.6 261 44.4
arahy.Tifrunner.gnm1.ann1.K6S8U8 Arachis hypogaea HOM05D007438 ORTHO05D009395 7.5e-42 174.9 264 42.8
SalBow7G1752 Salvia bowleyana HOM05D007438 ORTHO05D009395 2.4e-40 169.9 252 42.5
Lsat_1_v5_gn_4_26780 Lactuca sativa HOM05D007438 ORTHO05D009395 4.1e-40 169.1 244 44.3
EL10Ac9g21031 Beta vulgaris HOM05D007438 ORTHO05D009395 1.2e-39 167.5 264 37.1
A10p05120 Brassica napus HOM05D007438 ORTHO05D009395 4.5e-39 165.6 298 39.9
Sp1g05220 Schrenkiella parvula HOM05D007438 ORTHO05D009395 1.7e-38 163.7 287 39.0
Carub.0001s0582 Capsella rubella HOM05D007438 ORTHO05D009395 5.0e-38 162.2 274 38.0
AL1G16470 Arabidopsis lyrata HOM05D007438 ORTHO05D009395 6.5e-38 161.8 273 38.8
Hund07732 Selenicereus undatus HOM05D007438 ORTHO05D009395 6.5e-38 161.8 268 39.6
THA.LOC104800831 Tarenaya hassleriana HOM05D007438 ORTHO05D009395 8.5e-38 161.4 249 42.2
CANSAT64G1631 Cannabis sativa HOM05D007438 ORTHO05D009395 1.1e-37 161.0 290 39.7
TAR626G1821 Trochodendron aralioides HOM05D007438 ORTHO05D009395 1.1e-37 161.0 205 47.8
BcaB02g06796 Brassica carinata HOM05D007438 ORTHO05D009395 1.5e-37 160.6 287 38.3
CARHR006070 Cardamine hirsuta HOM05D007438 ORTHO05D009395 7.2e-37 158.3 273 37.4
Prupe.3G108500 Prunus persica HOM05D007438 ORTHO05D009395 7.2e-37 158.3 194 46.4
BraA10t42777Z Brassica rapa HOM05D007438 ORTHO05D009395 1.2e-36 157.5 307 36.5
C05p04710 Brassica napus HOM05D007438 ORTHO05D009395 4.7e-36 155.6 297 37.7
BolC5t29243H Brassica oleracea HOM05D007438 ORTHO05D009395 8.0e-36 154.8 308 36.7
ECA234G1517 Erigeron canadensis HOM05D007438 ORTHO05D009395 8.0e-36 154.8 258 41.1
SEGI_11984 Sequoiadendron giganteum HOM05D007438 ORTHO05D009395 2.3e-35 153.3 272 36.8
AT1G06460 Arabidopsis thaliana HOM05D007438 ORTHO05D009395 3.0e-35 152.9 273 38.8
A08p35960 Brassica napus HOM05D007438 ORTHO05D009395 2.6e-34 149.8 241 39.0
HanXRQChr01g0028661 Helianthus annuus HOM05D007438 ORTHO05D009395 2.6e-34 149.8 259 39.8
BraA08t35504Z Brassica rapa HOM05D007438 ORTHO05D009395 5.7e-34 148.7 274 37.6
C08p02600 Brassica napus HOM05D007438 ORTHO05D009395 7.5e-34 148.3 264 38.6
BolC8t47053H Brassica oleracea HOM05D007438 ORTHO05D009395 2.0e-31 140.2 267 37.5
Nitab4.5_0005259g0040 Nicotiana tabacum HOM05D007438 ORTHO05D009395 7.7e-31 138.3 226 39.4
Aa31LG1G7510 Aethionema arabicum HOM05D007438 ORTHO05D009395 8.0e-28 128.3 287 32.1
HPP92_021771 Vanilla planifolia HOM05D007438 ORTHO05D009395 1.8e-27 127.1 247 38.1
BcaB03g13417 Brassica carinata HOM05D000181 ORTHO05D002783 1.5e-26 124.0 260 36.5
Thhalv10008353m.g Eutrema salsugineum HOM05D007438 ORTHO05D009395 2.8e-25 119.8 220 37.3
Nitab4.5_0011473g0010 Nicotiana tabacum HOM05D007438 ORTHO05D009395 1.1e-24 117.9 180 39.4
ATR0127G021 Amborella trichopoda HOM05D007438 ORTHO05D009395 1.8e-24 117.1 227 35.2
BcaC07g36810 Brassica carinata HOM05D000181 ORTHO05D002783 3.1e-24 116.3 196 38.3
arahy.Tifrunner.gnm1.ann1.AN6F3M Arachis hypogaea HOM05D007438 ORTHO05D009395 1.3e-22 110.9 171 40.4
Sc21g0004330 Simmondsia chinensis HOM05D007438 ORTHO05D009395 2.5e-21 106.7 94 53.2
Phvul.003G195300 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 5.6e-21 105.5 155 41.9
SMO111G0151 Selaginella moellendorffii HOM05D007438 ORTHO05D009395 1.4e-19 100.9 246 30.1
Sc21g0004320 Simmondsia chinensis HOM05D007438 ORTHO05D009395 1.7e-17 94.0 171 39.8
Mapoly0109s0048 Marchantia polymorpha HOM05D007438 ORTHO05D009395 1.1e-16 91.3 295 28.5
HanXRQChr17g0565881 Helianthus annuus HOM05D007438 ORTHO05D009395 1.5e-13 80.9 130 40.8
SalBow8G2019 Salvia bowleyana HOM05D007438 ORTHO05D009395 2.5e-13 80.1 141 41.8
arahy.Tifrunner.gnm1.ann1.28WURV Arachis hypogaea HOM05D007438 ORTHO05D009395 1.2e-12 77.8 143 36.4
Pp3c2_23860 Physcomitrium patens HOM05D007438 ORTHO05D009395 2.6e-10 70.1 211 30.8
Haze_13451 Corylus avellana HOM05D007438 ORTHO05D009395 2.2e-09 67.0 128 42.2
SEGI_03948 Sequoiadendron giganteum HOM05D005242 ORTHO05D000080 1.0e-06 58.2 86 30.2
CDE10G0904 Ceratophyllum demersum HOM05D005523 ORTHO05D007089 8.6e-06 55.1 79 30.4


User provided reference genes

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