Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 0.0e+00 1511.9 772 100.0
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 4.4e-216 755.4 766 56.0
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 7.2e-211 738.0 756 55.0
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 3.4e-184 649.4 760 50.0
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 1.2e-181 641.0 792 48.4
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 1.5e-168 597.4 779 44.5
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 3.4e-168 596.3 777 46.5
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 4.4e-168 595.9 769 45.5
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 1.3e-167 594.3 779 46.5
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 4.2e-166 589.3 769 46.6
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 2.1e-162 577.0 774 45.5
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 5.3e-161 572.4 754 46.6
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 4.2e-158 562.8 738 45.1
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 1.6e-157 560.8 774 45.1
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 1.8e-156 557.4 762 45.9
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 8.7e-156 555.1 766 44.5
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 3.3e-155 553.1 769 44.5
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 3.3e-155 553.1 749 44.2
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 4.8e-154 549.3 758 44.7
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 8.1e-154 548.5 748 44.8
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 8.4e-151 538.5 734 45.2
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 8.4e-151 538.5 707 45.4
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.4e-150 537.7 761 43.8
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 4.6e-149 532.7 761 43.6
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 6.0e-149 532.3 768 45.3
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 1.3e-148 531.2 737 44.6
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 8.7e-148 528.5 737 43.6
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 7.4e-147 525.4 757 43.3
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 1.6e-146 524.2 762 42.8
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 4.8e-146 522.7 761 42.8
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 4.8e-146 522.7 761 42.8
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 2.4e-145 520.4 798 42.6
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 1.4e-134 484.6 672 45.1
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 7.9e-133 478.8 802 39.8
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 3.7e-130 469.9 761 39.9
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 2.5e-126 457.2 794 40.1
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 6.7e-124 449.1 774 38.0
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 6.3e-122 442.6 549 47.7
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 1.1e-121 441.8 779 37.1
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 9.4e-118 428.7 758 37.2
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 1.5e-115 421.4 758 37.6
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 2.0e-115 421.0 649 40.7
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 2.6e-115 420.6 735 38.9
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 6.3e-114 416.0 763 37.2
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 1.8e-113 414.5 767 36.2
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 4.4e-107 393.3 695 38.6
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 7.5e-107 392.5 798 36.6
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 7.5e-107 392.5 467 49.9
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 3.7e-106 390.2 620 40.0
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 4.8e-106 389.8 689 38.8
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 8.3e-106 389.0 768 37.8
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 8.3e-106 389.0 741 36.0
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 2.4e-105 387.5 788 36.9
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 5.4e-105 386.3 759 36.0
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 2.2e-103 380.9 799 37.2
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 1.1e-102 378.6 693 38.0
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 3.2e-102 377.1 836 35.3
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 2.3e-100 370.9 756 37.4
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 2.3e-100 370.9 756 37.4
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 8.8e-100 369.0 695 38.3
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 2.0e-99 367.9 688 37.2
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 6.3e-98 362.8 792 34.8
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 6.3e-98 362.8 639 38.8
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 8.3e-98 362.5 753 34.4
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 1.8e-97 361.3 743 34.9
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 1.2e-96 358.6 476 48.1
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 2.0e-96 357.8 760 36.4
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 7.7e-96 355.9 690 35.9
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 1.3e-95 355.1 754 35.0
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 3.8e-95 353.6 761 36.7
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 8.6e-95 352.4 695 37.0
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 1.1e-94 352.1 774 34.8
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 2.1e-93 347.8 744 34.4
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 2.8e-93 347.4 688 35.6
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 1.0e-92 345.5 651 35.9
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 1.0e-92 345.5 711 36.1
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 1.8e-92 344.7 739 34.4
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 5.2e-92 343.2 691 35.7
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 7.0e-89 332.8 775 33.2
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 2.7e-88 330.9 714 35.6
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 6.8e-84 316.2 607 37.1
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 4.9e-82 310.1 751 35.0
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 2.8e-77 294.3 748 32.6
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 5.8e-75 286.6 511 37.0
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 1.1e-73 282.3 714 33.1
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 1.1e-73 282.3 700 33.6
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 5.4e-73 280.0 681 31.4
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 1.6e-72 278.5 740 31.2
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 5.1e-71 273.5 615 35.0
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 7.1e-65 253.1 761 32.7
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 4.6e-64 250.4 373 44.0
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 3.6e-61 240.7 533 35.5
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 1.1e-60 239.2 692 33.1
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 5.2e-60 236.9 534 35.4
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 1.5e-59 235.3 534 35.2
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 8.4e-58 229.6 700 29.9
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 1.3e-53 215.7 760 27.0
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 1.8e-52 211.8 533 34.3
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 2.8e-45 188.0 417 34.5
Cpa.g.c34985.1 Carica papaya HOM05D006728 ORTHO05D007911 6.4e-42 176.8 250 41.6
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 9.6e-38 162.9 706 24.6
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 8.7e-31 139.8 271 38.4
Atru.chr1.2803 Acer truncatum HOM05D006728 ORTHO05D007911 3.1e-28 131.3 147 51.7
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 3.8e-26 124.4 743 25.2
Os02g0461200 Oryza sativa ssp. japonica HOM05D006728 ORTHO05D007911 7.4e-22 110.2 552 24.3
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 2.2e-21 108.6 126 50.0
Zm00001eb295040 Zea mays HOM05D006728 ORTHO05D007911 3.7e-21 107.8 581 23.8
CDE05G2798 Ceratophyllum demersum HOM05D006728 ORTHO05D007911 3.9e-15 87.8 127 37.8
Cfa008144 Carpinus fangiana HOM05D006728 ORTHO05D007911 8.8e-15 86.7 91 48.4
Glyma.20G198666 Glycine max HOM05D006728 ORTHO05D007911 2.8e-13 81.6 167 35.9
Glyma.20G198732 Glycine max HOM05D006728 ORTHO05D007911 2.4e-12 78.6 148 37.2
SHI29297 Sapria himalayana HOM05D006728 ORTHO05D007911 2.6e-11 75.1 78 48.7
Prupe.8G015600 Prunus persica HOM05D025481 ORTHO05D007911 5.0e-10 70.9 268 29.5
RcHm_v2.0_Chr5g0040361 Rosa chinensis HOM05D006728 ORTHO05D007911 1.4e-09 69.3 101 43.6
SEGI_13134 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 7.9e-08 63.5 280 27.9


User provided reference genes

Program Settings