Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 2.7e-62 241.9 126 100.0
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 4.7e-35 151.4 125 67.2
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 5.2e-26 121.3 125 53.6
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 6.4e-24 114.4 129 51.2
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.2e-22 110.2 127 52.0
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.2e-22 110.2 127 52.0
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 4.6e-22 108.2 121 52.1
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 4.6e-22 108.2 125 48.8
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.0e-21 107.1 127 51.2
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.3e-21 105.9 127 49.6
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 5.1e-21 104.8 129 45.7
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.5e-20 103.2 126 50.0
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.5e-20 103.2 126 50.0
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 5.6e-20 101.3 124 46.8
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 1.6e-19 99.8 125 46.4
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 6.2e-19 97.8 129 46.5
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 8.1e-19 97.4 125 46.4
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 2.4e-18 95.9 130 48.5
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 2.4e-18 95.9 125 47.2
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 2.4e-18 95.9 125 47.2
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 6.9e-18 94.4 126 46.8
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 2.0e-17 92.8 123 48.0
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.6e-17 92.4 125 49.6
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 3.4e-17 92.0 127 44.9
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 5.8e-17 91.3 125 48.8
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 7.6e-17 90.9 123 45.5
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 7.6e-17 90.9 123 48.0
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 7.6e-17 90.9 126 44.4
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.3e-16 90.1 125 45.6
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 6.4e-16 87.8 112 48.2
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 6.4e-16 87.8 127 42.5
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 8.4e-16 87.4 96 45.8
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 8.4e-16 87.4 118 43.2
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 1.9e-15 86.3 119 41.2
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 3.2e-15 85.5 97 45.4
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 4.2e-15 85.1 120 49.2
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 4.2e-15 85.1 124 42.7
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 7.1e-15 84.3 134 43.3
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 2.1e-14 82.8 83 48.2
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 2.7e-14 82.4 94 50.0
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 4.6e-14 81.6 127 41.7
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 1.0e-13 80.5 118 44.1
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 1.3e-13 80.1 97 43.3
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 1.7e-13 79.7 119 42.9
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 1.7e-13 79.7 124 45.2
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 3.0e-13 79.0 111 45.9
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 3.9e-13 78.6 128 39.8
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 5.1e-13 78.2 122 41.8
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 8.7e-13 77.4 124 40.3
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 8.7e-13 77.4 99 41.4
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 8.7e-13 77.4 98 41.8
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 1.1e-12 77.0 127 40.2
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 1.5e-12 76.6 95 45.3
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.5e-12 76.6 100 46.0
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 1.9e-12 76.3 127 40.9
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 2.5e-12 75.9 92 50.0
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 2.5e-12 75.9 97 41.2
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 3.3e-12 75.5 131 40.5
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 4.3e-12 75.1 93 46.2
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 5.6e-12 74.7 96 43.8
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 5.6e-12 74.7 96 43.8
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 5.6e-12 74.7 121 38.8
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 9.6e-12 73.9 128 37.5
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 1.3e-11 73.6 101 40.6
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 1.3e-11 73.6 129 41.9
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 4.8e-11 71.6 132 40.2
QL02p049171 Quercus lobata HOM05D007637 ORTHO05D009508 6.2e-11 71.2 51 58.8
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 1.8e-10 69.7 128 40.6
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 6.9e-10 67.8 95 38.9
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 1.2e-09 67.0 98 36.7
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 1.2e-09 67.0 98 36.7
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 5.8e-09 64.7 108 42.6
CiPaw.05G246900 Carya illinoinensis HOM05D007637 ORTHO05D009508 2.9e-08 62.4 94 34.0
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 3.8e-08 62.0 103 36.9
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 4.9e-08 61.6 114 36.0
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 4.9e-08 61.6 118 33.9
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 4.9e-08 61.6 107 40.2
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 6.4e-08 61.2 99 40.4
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 1.1e-07 60.5 104 36.5
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 1.1e-07 60.5 104 36.5
Phvul.007G035600 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 2.4e-07 59.3 81 35.8
MBI16_g21183_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 4.2e-07 58.5 56 44.6
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 4.2e-07 58.5 96 36.5
QL01p002403 Quercus lobata HOM05D006556 ORTHO05D008146 9.3e-07 57.4 78 39.7
Nitab4.5_0002456g0100 Nicotiana tabacum HOM05D007637 ORTHO05D009508 1.6e-06 56.6 85 35.3
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 4.6e-06 55.1 87 48.3
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 6.0e-06 54.7 124 32.3
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 7.9e-06 54.3 96 32.3
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 7.9e-06 54.3 100 36.0


User provided reference genes

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