Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 1.8e-249 865.5 466 100.0
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 3.2e-153 545.8 454 65.4
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 1.0e-135 487.6 466 59.9
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 5.3e-132 475.3 455 58.9
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 1.1e-129 467.6 477 57.9
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 1.1e-126 457.6 476 57.6
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 1.6e-125 453.8 462 58.9
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 2.6e-123 446.4 471 55.4
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 7.7e-123 444.9 378 65.9
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 5.5e-121 438.7 470 54.7
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 3.6e-120 436.0 493 52.1
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 1.0e-119 434.5 479 53.0
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 3.4e-115 419.5 464 55.4
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 2.9e-114 416.4 474 51.3
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 3.8e-114 416.0 461 55.7
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 3.8e-114 416.0 460 52.6
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 5.0e-114 415.6 479 52.4
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 1.4e-113 414.1 474 53.6
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 1.2e-112 411.0 482 50.4
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 4.7e-112 409.1 559 47.4
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 3.3e-110 402.9 433 55.7
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 1.8e-108 397.1 462 52.6
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 2.4e-108 396.7 471 53.1
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 2.6e-107 393.3 460 50.0
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 4.5e-107 392.5 459 51.6
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 2.2e-106 390.2 466 50.4
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 2.9e-106 389.8 459 50.1
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 1.1e-105 387.9 449 51.7
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 8.0e-104 381.7 458 51.1
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 9.7e-102 374.8 487 48.7
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 5.9e-99 365.5 473 47.4
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 2.9e-98 363.2 495 47.9
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 1.5e-97 360.9 465 48.2
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 3.6e-96 356.3 491 44.6
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 1.8e-95 354.0 488 46.5
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 6.8e-95 352.1 488 45.5
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 1.5e-94 350.9 437 49.4
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 2.6e-94 350.1 475 45.9
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 3.4e-94 349.7 458 48.7
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 4.4e-94 349.4 438 48.6
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 1.3e-93 347.8 461 49.0
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 4.8e-93 345.9 458 48.5
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 2.0e-91 340.5 466 45.9
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 4.5e-91 339.3 449 49.7
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 5.9e-91 339.0 459 46.4
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 2.9e-90 336.7 469 46.9
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 6.5e-90 335.5 467 45.0
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 4.2e-89 332.8 478 46.7
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 1.0e-87 328.2 463 46.2
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 2.0e-86 323.9 404 53.5
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 2.0e-86 323.9 426 48.8
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 2.6e-86 323.6 394 52.5
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 4.4e-86 322.8 468 43.4
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 4.4e-86 322.8 460 48.9
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 1.1e-84 318.2 478 43.7
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 7.0e-84 315.5 486 43.0
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 7.7e-83 312.0 494 42.3
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 8.6e-82 308.5 389 47.6
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 5.6e-81 305.8 461 42.3
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 7.3e-81 305.4 494 42.5
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 8.0e-80 302.0 456 43.6
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 1.0e-79 301.6 489 42.5
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 1.0e-79 301.6 314 56.7
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 3.4e-78 296.6 426 46.0
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 1.3e-77 294.7 507 40.0
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 3.5e-75 286.6 480 41.2
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 3.5e-75 286.6 333 50.2
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 4.6e-75 286.2 414 44.2
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 4.3e-73 279.6 311 54.0
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 2.8e-72 276.9 591 36.0
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 6.2e-72 275.8 463 41.7
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 4.4e-70 269.6 332 48.8
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 2.3e-66 257.3 464 40.3
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 7.3e-65 252.3 436 40.1
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 9.5e-65 251.9 482 37.8
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 2.6e-62 243.8 366 42.9
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 5.8e-62 242.7 302 48.3
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 5.4e-60 236.1 285 50.2
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 2.3e-58 230.7 449 36.3
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 4.7e-56 223.0 315 42.9
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 8.9e-55 218.8 193 63.7
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 2.4e-52 210.7 283 47.0
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.7e-50 204.5 427 35.8
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 1.7e-45 188.0 550 30.4
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 2.2e-45 187.6 170 60.6
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 1.9e-44 184.5 265 43.0
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 8.7e-42 175.6 470 31.9
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 6.2e-40 169.5 462 29.7
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 7.1e-36 156.0 171 52.6
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 2.5e-33 147.5 139 54.7
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 3.3e-33 147.1 192 47.4
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 2.0e-30 137.9 190 44.7
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 1.1e-25 122.1 148 48.6
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 1.0e-18 99.0 418 27.3
AUR62035477 Chenopodium quinoa HOM05D000128 ORTHO05D000059 4.8e-16 90.1 86 47.7
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 1.8e-15 88.2 119 44.5
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 1.5e-14 85.1 103 50.5
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 8.5e-13 79.3 137 38.0
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 3.6e-11 73.9 247 29.6
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 6.1e-11 73.2 249 25.3
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 8.7e-10 69.3 165 32.1
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 2.2e-08 64.7 104 37.5
Mapoly0080s0048 Marchantia polymorpha HOM05D007356 ORTHO05D009247 3.7e-08 63.9 156 29.5
HPP92_009695 Vanilla planifolia HOM05D007356 ORTHO05D009247 1.4e-07 62.0 138 35.5
CBR_g44341 Chara braunii HOM05D007356 ORTHO05D009247 2.4e-07 61.2 84 35.7


User provided reference genes

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