Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G104500 Manihot esculenta HOM05D011223 ORTHO05D010778 1.8e-125 452.6 227 100.0
Manes.02G060950 Manihot esculenta HOM05D011223 ORTHO05D010778 7.2e-50 201.4 233 57.1
Potri.017G102200 Populus trichocarpa HOM05D011223 ORTHO05D010778 8.0e-33 144.8 238 46.6
Sabra17G0088100 Salix brachista HOM05D011223 ORTHO05D010778 5.2e-32 142.1 236 43.6
Potri.004G112600 Populus trichocarpa HOM05D011223 ORTHO05D010778 2.2e-30 136.7 234 41.5
QL02p065009 Quercus lobata HOM05D012028 ORTHO05D010778 2.2e-30 136.7 230 41.7
Sabra04G0072200 Salix brachista HOM05D011223 ORTHO05D010778 6.5e-27 125.2 253 39.1
CiPaw.04G051300 Carya illinoinensis HOM05D011223 ORTHO05D010778 8.8e-24 114.8 247 37.7
Cfa007707 Carpinus fangiana HOM05D012028 ORTHO05D010778 2.6e-23 113.2 253 39.9
CSS0003820 Camellia sinensis var. sinensis HOM05D011223 ORTHO05D010778 2.8e-22 109.8 231 39.0
Thecc.04G108700 Theobroma cacao HOM05D013808 ORTHO05D010778 9.1e-21 104.8 283 36.0
Actinidia18091 Actinidia chinensis HOM05D011223 ORTHO05D010778 1.5e-18 97.4 238 37.4
Prupe.3G247600 Prunus persica HOM05D012028 ORTHO05D010778 3.6e-17 92.8 232 33.2
Dinv33878 Davidia involucrata HOM05D011223 ORTHO05D010778 4.0e-16 89.4 234 37.2
MD09G1076500 Malus domestica HOM05D012028 ORTHO05D010778 5.7e-15 85.5 256 32.4
FAN09G1346 Fragaria x ananassa HOM05D012028 ORTHO05D010778 1.6e-12 77.4 234 32.9
FAN05G4491 Fragaria x ananassa HOM05D012028 ORTHO05D010778 2.0e-12 77.0 234 33.3
FvH4_6g46170 Fragaria vesca HOM05D012028 ORTHO05D010778 1.0e-11 74.7 233 31.8
COL.COLO4_10646 Corchorus olitorius HOM05D013808 ORTHO05D010778 2.3e-11 73.6 93 54.8
Dinv36819 Davidia involucrata HOM05D011223 ORTHO05D016556 2.3e-11 73.6 226 36.3
FAN02G2376 Fragaria x ananassa HOM05D012028 ORTHO05D010778 3.9e-11 72.8 236 33.1
MD17G1067000 Malus domestica HOM05D012028 ORTHO05D010778 5.0e-11 72.4 271 29.9
Nn3g17567 Nelumbo nucifera HOM05D011223 ORTHO05D010778 1.1e-10 71.2 187 36.4
Lalb_Chr04g0258351 Lupinus albus HOM05D017176 ORTHO05D014443 1.6e-09 67.4 227 29.1
Dinv34899 Davidia involucrata HOM05D004302 ORTHO05D004939 2.8e-09 66.6 196 33.7
Gohir.A11G160400 Gossypium hirsutum HOM05D013808 ORTHO05D010778 3.6e-09 66.2 38 78.9
Gohir.D11G166600 Gossypium hirsutum HOM05D013808 ORTHO05D010778 3.6e-09 66.2 38 78.9
Gorai.007G177600 Gossypium raimondii HOM05D013808 ORTHO05D010778 3.6e-09 66.2 38 78.9
AUR62009463 Chenopodium quinoa HOM05D027608 ORTHO05D010778 1.0e-08 64.7 249 27.3
ClCG07G016120 Citrullus lanatus HOM05D034995 ORTHO05D010778 1.4e-08 64.3 236 30.9
TAR622G1316 Trochodendron aralioides HOM05D011223 ORTHO05D010778 3.1e-08 63.2 108 43.5
Nn4g23563 Nelumbo nucifera HOM05D011223 ORTHO05D010778 4.0e-08 62.8 229 31.9
Sabra17G0087900 Salix brachista HOM05D000878 ORTHO05D004971 6.8e-08 62.0 51 60.8
CANSAT64G2872 Cannabis sativa HOM05D012028 ORTHO05D010778 2.0e-07 60.5 82 46.3
PGR004G0322 Punica granatum HOM05D011223 ORTHO05D010778 7.5e-07 58.5 239 27.6
SalBow1G4522 Salvia bowleyana HOM05D013808 ORTHO05D010778 7.5e-07 58.5 35 74.3
Cpa.g.sc14.249 Carica papaya HOM05D012028 ORTHO05D010778 9.8e-07 58.2 62 50.0
AUR62023145 Chenopodium quinoa HOM05D027608 ORTHO05D010778 9.8e-07 58.2 86 41.9
CsaV3_4G009950 Cucumis sativus L. HOM05D034995 ORTHO05D010778 9.8e-07 58.2 234 26.9
Glyma.18G275800 Glycine max HOM05D017176 ORTHO05D014443 1.3e-06 57.8 168 31.5
Sed0011744 Sechium edule HOM05D034995 ORTHO05D010778 4.9e-06 55.8 86 37.2
Actinidia36272 Actinidia chinensis HOM05D011223 ORTHO05D010778 8.3e-06 55.1 203 31.0


User provided reference genes

Program Settings