Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 2.9e-55 218.4 117 100.0
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 2.8e-29 132.1 115 67.8
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 3.0e-28 128.6 121 66.1
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 1.4e-25 119.8 106 64.2
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 8.6e-23 110.5 114 63.2
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 8.6e-23 110.5 111 61.3
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 1.9e-22 109.4 122 59.0
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 3.6e-21 105.1 109 56.0
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 7.5e-19 97.4 122 53.3
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 9.8e-19 97.1 91 63.7
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 1.1e-17 93.6 97 60.8
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.0e-15 87.0 93 55.9
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 2.3e-15 85.9 81 59.3
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 6.6e-15 84.3 64 65.6
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 8.6e-15 84.0 96 58.3
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 1.1e-14 83.6 102 53.9
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 2.5e-14 82.4 91 56.0
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 3.3e-14 82.0 106 50.0
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 4.3e-14 81.6 112 50.9
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 4.3e-14 81.6 88 56.8
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 4.3e-14 81.6 103 56.3
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 7.3e-14 80.9 84 53.6
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 1.2e-13 80.1 91 51.6
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 1.6e-13 79.7 95 54.7
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 2.1e-13 79.3 130 47.7
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.1e-13 79.3 130 47.7
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.1e-13 79.3 130 47.7
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 2.1e-13 79.3 70 61.4
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 3.6e-13 78.6 101 55.4
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 4.7e-13 78.2 102 52.0
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 6.2e-13 77.8 92 54.3
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 8.1e-13 77.4 98 51.0
Lalb_Chr02g0158971 Lupinus albus HOM05D007413 ORTHO05D009357 8.1e-13 77.4 112 45.5
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 8.1e-13 77.4 60 63.3
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 1.1e-12 77.0 109 50.5
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 1.1e-12 77.0 99 52.5
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 1.8e-12 76.3 108 50.9
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 1.8e-12 76.3 116 45.7
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.3e-12 75.9 130 46.9
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 2.3e-12 75.9 67 64.2
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 3.1e-12 75.5 112 45.5
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 3.1e-12 75.5 130 45.4
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 4.0e-12 75.1 105 45.7
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 5.2e-12 74.7 103 45.6
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 5.2e-12 74.7 121 48.8
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 8.9e-12 73.9 91 51.6
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 1.2e-11 73.6 80 55.0
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 1.5e-11 73.2 125 44.8
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 1.5e-11 73.2 97 48.5
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 1.5e-11 73.2 116 46.6
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 2.6e-11 72.4 59 61.0
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 4.4e-11 71.6 59 59.3
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 9.9e-11 70.5 72 59.7
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 9.9e-11 70.5 106 37.7
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 9.9e-11 70.5 89 48.3
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 1.7e-10 69.7 112 39.3
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 1.7e-10 69.7 83 49.4
RcHm_v2.0_Chr2g0166071 Rosa chinensis HOM05D007413 ORTHO05D009357 2.2e-10 69.3 128 46.9
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 3.7e-10 68.6 77 44.2
Gohir.A05G371900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 4.9e-10 68.2 112 38.4
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 4.9e-10 68.2 106 43.4
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 6.4e-10 67.8 56 62.5
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 8.3e-10 67.4 123 42.3
MELO3C022028.2 Cucumis melo HOM05D007413 ORTHO05D009357 8.3e-10 67.4 115 40.9
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 8.3e-10 67.4 112 38.4
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 1.1e-09 67.0 95 42.1
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 1.4e-09 66.6 99 47.5
DCAR_011043 Daucus carota HOM05D007413 ORTHO05D009357 1.4e-09 66.6 61 50.8
Carub.0007s3668 Capsella rubella HOM05D007413 ORTHO05D009357 5.4e-09 64.7 106 44.3
Sed0019528 Sechium edule HOM05D007413 ORTHO05D009357 7.1e-09 64.3 120 45.0
THA.LOC104825781 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 1.6e-08 63.2 104 42.3
PGSC0003DMG400025144 Solanum tuberosum HOM05D007413 ORTHO05D009357 2.1e-08 62.8 116 39.7
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 3.5e-08 62.0 100 42.0
A04p11950 Brassica napus HOM05D007413 ORTHO05D009357 7.8e-08 60.8 81 46.9
BraA04t16860Z Brassica rapa HOM05D007413 ORTHO05D009357 7.8e-08 60.8 81 46.9
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 7.8e-08 60.8 79 51.9
THA.LOC109116393 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 7.8e-08 60.8 104 41.3
BcaB06g27281 Brassica carinata HOM05D007413 ORTHO05D009357 1.0e-07 60.5 119 39.5
Rhsim08G0074700 Rhododendron simsii HOM05D007413 ORTHO05D009357 1.3e-07 60.1 39 76.9
SGA_v2.0_scaffold52G19169 Striga asiatica HOM05D007413 ORTHO05D009357 1.3e-07 60.1 57 57.9
Sc14g0006230 Simmondsia chinensis HOM05D007413 ORTHO05D009357 2.3e-07 59.3 58 53.4
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 3.9e-07 58.5 58 51.7
Thhalv10027993m.g Eutrema salsugineum HOM05D007413 ORTHO05D009357 6.6e-07 57.8 103 43.7
AL7G51220 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 8.6e-07 57.4 103 45.6
AT3G29370 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 8.6e-07 57.4 99 46.5
Lsat_1_v5_gn_4_171221 Lactuca sativa HOM05D007413 ORTHO05D009357 8.6e-07 57.4 95 44.2
BcaC02g09685 Brassica carinata HOM05D007413 ORTHO05D009357 1.1e-06 57.0 119 38.7
C04p45600 Brassica napus HOM05D007413 ORTHO05D009357 1.1e-06 57.0 119 38.7
BolC4t26142H Brassica oleracea HOM05D007413 ORTHO05D009357 1.1e-06 57.0 119 38.7
Lalb_Chr21g0318381 Lupinus albus HOM05D007413 ORTHO05D009357 1.5e-06 56.6 104 41.3
Carub.0005s0809 Capsella rubella HOM05D007413 ORTHO05D009357 1.9e-06 56.2 64 48.4
AT5G39240 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 2.5e-06 55.8 99 42.4
ATR0064G025 Amborella trichopoda HOM05D007413 ORTHO05D009357 4.3e-06 55.1 52 51.9
Aa31LG9G16690 Aethionema arabicum HOM05D007413 ORTHO05D009357 5.6e-06 54.7 59 54.2


User provided reference genes

Program Settings