Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G089000 Manihot esculenta HOM05D006150 ORTHO05D007745 7.7e-180 633.6 308 100.0
Thecc.03G240100 Theobroma cacao HOM05D006150 ORTHO05D007745 3.8e-147 525.0 305 83.0
COL.COLO4_07285 Corchorus olitorius HOM05D006150 ORTHO05D007745 7.3e-146 520.8 304 81.9
Ciclev10021365m.g Citrus clementina HOM05D006150 ORTHO05D007745 8.0e-145 517.3 301 82.4
Gohir.A12G212700 Gossypium hirsutum HOM05D006150 ORTHO05D007745 5.2e-144 514.6 303 82.8
CANSAT21G0710 Cannabis sativa HOM05D006150 ORTHO05D007745 8.9e-144 513.8 298 82.6
Gorai.008G230800 Gossypium raimondii HOM05D006150 ORTHO05D007745 1.5e-143 513.1 303 82.2
Gohir.D12G215200 Gossypium hirsutum HOM05D006150 ORTHO05D007745 1.3e-142 510.0 303 81.5
Duzib084G0008 Durio zibethinus HOM05D006150 ORTHO05D007745 2.9e-142 508.8 308 80.2
Potri.003G083600 Populus trichocarpa HOM05D006150 ORTHO05D007745 3.7e-142 508.4 308 82.5
Hma1.2p1_0570F.1_g180430 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 2.4e-141 505.8 284 83.1
Rhsim07G0136400 Rhododendron simsii HOM05D006150 ORTHO05D007745 9.2e-141 503.8 306 79.7
THA.LOC104807929 Tarenaya hassleriana HOM05D006150 ORTHO05D007745 2.7e-140 502.3 296 80.4
TAR636G1440 Trochodendron aralioides HOM05D006150 ORTHO05D007745 6.0e-140 501.1 298 80.2
CARHR223610 Cardamine hirsuta HOM05D006150 ORTHO05D007745 6.6e-139 497.7 303 78.5
TWI60G0542 Tripterygium wilfordii HOM05D006150 ORTHO05D007745 1.1e-138 496.9 281 81.1
RcHm_v2.0_Chr7g0205681 Rosa chinensis HOM05D006150 ORTHO05D007745 1.5e-138 496.5 298 80.2
BraA03t14117Z Brassica rapa HOM05D006150 ORTHO05D007745 4.3e-138 495.0 303 77.9
CSS0019555 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 5.6e-138 494.6 305 78.0
Atru.chr9.1206 Acer truncatum HOM05D006150 ORTHO05D007745 9.5e-138 493.8 296 80.4
FAN04G1813 Fragaria x ananassa HOM05D006150 ORTHO05D007745 1.6e-137 493.0 297 79.5
AT4G17050 Arabidopsis thaliana HOM05D006150 ORTHO05D007745 2.1e-137 492.7 293 79.5
BcaNung04656 Brassica carinata HOM05D006150 ORTHO05D007745 2.1e-137 492.7 303 77.6
C07p48520 Brassica napus HOM05D006150 ORTHO05D007745 6.2e-137 491.1 303 77.2
BolC7t45360H Brassica oleracea HOM05D006150 ORTHO05D007745 6.2e-137 491.1 303 77.2
BraA01t01953Z Brassica rapa HOM05D006150 ORTHO05D007745 6.2e-137 491.1 304 77.0
Sopen08g026350 Solanum pennellii HOM05D006150 ORTHO05D007745 8.0e-137 490.7 280 82.1
Carub.0007s2437 Capsella rubella HOM05D006150 ORTHO05D007745 1.1e-136 490.3 303 76.9
FvH4_5g20400 Fragaria vesca HOM05D006150 ORTHO05D007745 1.4e-136 490.0 292 79.8
A03p50280 Brassica napus HOM05D006150 ORTHO05D007745 1.8e-136 489.6 303 77.6
PSO675G6476 Papaver somniferum HOM05D006150 ORTHO05D007745 1.8e-136 489.6 303 79.2
AL7G37660 Arabidopsis lyrata HOM05D006150 ORTHO05D007745 2.3e-136 489.2 290 79.7
C07p48460 Brassica napus HOM05D006150 ORTHO05D007745 3.1e-136 488.8 303 77.2
PGSC0003DMG400026243 Solanum tuberosum HOM05D006150 ORTHO05D007745 3.1e-136 488.8 280 81.8
Lj8A277T42 Lonicera japonica HOM05D006150 ORTHO05D007745 5.2e-136 488.0 285 79.6
Solyc08g077840.3 Solanum lycopersicum HOM05D006150 ORTHO05D007745 5.2e-136 488.0 304 77.3
ClCG10G005070 Citrullus lanatus HOM05D006150 ORTHO05D007745 6.8e-136 487.6 297 78.5
CsaV3_3G004750 Cucumis sativus L. HOM05D006150 ORTHO05D007745 6.8e-136 487.6 297 79.1
Sp7g17140 Schrenkiella parvula HOM05D006150 ORTHO05D007745 6.8e-136 487.6 300 77.0
FAN08G0760 Fragaria x ananassa HOM05D006150 ORTHO05D007745 8.9e-136 487.3 291 80.1
BcaC06g33538 Brassica carinata HOM05D006150 ORTHO05D007745 1.2e-135 486.9 305 77.4
MBI04_g13858_MAGBIO Magnolia biondii HOM05D006150 ORTHO05D007745 1.2e-135 486.9 300 77.3
Cfa012327 Carpinus fangiana HOM05D006150 ORTHO05D007745 1.5e-135 486.5 298 78.5
CiPaw.11G072300 Carya illinoinensis HOM05D006150 ORTHO05D007745 4.4e-135 485.0 295 78.0
CAN.G572.11 Capsicum annuum HOM05D006150 ORTHO05D007745 5.8e-135 484.6 305 76.7
PSO732G0290 Papaver somniferum HOM05D006150 ORTHO05D007745 7.5e-135 484.2 306 78.1
MD04G1055500 Malus domestica HOM05D006150 ORTHO05D007745 1.3e-134 483.4 299 77.6
BolC1t02493H Brassica oleracea HOM05D006150 ORTHO05D007745 1.7e-134 483.0 300 77.0
BcaNung00130 Brassica carinata HOM05D006150 ORTHO05D007745 2.9e-134 482.3 300 76.7
Cc08_g11330 Coffea canephora HOM05D006150 ORTHO05D007745 3.7e-134 481.9 302 75.5
Sed0022790 Sechium edule HOM05D006150 ORTHO05D007745 6.4e-134 481.1 301 75.7
C07p48390 Brassica napus HOM05D006150 ORTHO05D007745 2.4e-133 479.2 303 76.9
Nn6g33757 Nelumbo nucifera HOM05D006150 ORTHO05D007745 4.1e-133 478.4 288 79.9
DCAR_008330 Daucus carota HOM05D006150 ORTHO05D007745 2.0e-132 476.1 300 76.0
EL10Ac5g12270 Beta vulgaris HOM05D006150 ORTHO05D007745 7.8e-132 474.2 293 76.1
MSTRG.6640 Avicennia marina HOM05D006150 ORTHO05D007745 1.7e-131 473.0 304 75.0
Eucgr.D02133 Eucalyptus grandis HOM05D006150 ORTHO05D007745 3.0e-131 472.2 298 78.5
PGR031G0533 Punica granatum HOM05D006150 ORTHO05D007745 3.0e-131 472.2 260 85.0
arahy.Tifrunner.gnm1.ann1.IPM3U6 Arachis hypogaea HOM05D006150 ORTHO05D007745 3.3e-130 468.8 293 77.5
Haze_08363 Corylus avellana HOM05D006150 ORTHO05D007745 4.3e-130 468.4 323 72.1
arahy.Tifrunner.gnm1.ann1.YY6LCE Arachis hypogaea HOM05D006150 ORTHO05D007745 7.3e-130 467.6 293 77.8
Lalb_Chr09g0329771 Lupinus albus HOM05D006150 ORTHO05D007745 1.6e-129 466.5 277 78.7
SalBow7G3619 Salvia bowleyana HOM05D006150 ORTHO05D007745 3.6e-129 465.3 276 78.3
Ah.12g053980 Amaranthus hybridus HOM05D006150 ORTHO05D007745 4.7e-129 464.9 295 73.9
HanXRQChr17g0534011 Helianthus annuus HOM05D006150 ORTHO05D007745 6.2e-129 464.5 309 74.4
A01p20260 Brassica napus HOM05D006150 ORTHO05D007745 8.1e-129 464.2 291 76.6
ATR0665G013 Amborella trichopoda HOM05D006150 ORTHO05D007745 2.3e-128 462.6 309 73.8
CDE12G0966 Ceratophyllum demersum HOM05D006150 ORTHO05D007745 2.3e-128 462.6 275 78.9
PSO732G0039 Papaver somniferum HOM05D006150 ORTHO05D007745 2.3e-128 462.6 305 75.1
Nitab4.5_0000500g0240 Nicotiana tabacum HOM05D006150 ORTHO05D007745 8.9e-128 460.7 306 75.5
Glyma.17G148400 Glycine max HOM05D006150 ORTHO05D007745 2.9e-126 455.7 293 74.4
Glyma.05G066500 Glycine max HOM05D006150 ORTHO05D007745 6.4e-126 454.5 277 76.9
ECA234G2169 Erigeron canadensis HOM05D006150 ORTHO05D007745 1.1e-125 453.8 301 72.8
Lj4g0002003 Lotus japonicus HOM05D006150 ORTHO05D007745 1.4e-125 453.4 297 74.7
Nitab4.5_0009451g0030 Nicotiana tabacum HOM05D006150 ORTHO05D007745 9.2e-125 450.7 308 73.7
Medtr4g099290 Medicago truncatula HOM05D006150 ORTHO05D007745 2.1e-124 449.5 300 72.0
Aqoxy5G02622 Aquilegia oxysepala HOM05D006150 ORTHO05D007745 2.7e-124 449.1 307 70.4
Os07g0495000 Oryza sativa ssp. japonica HOM05D006150 ORTHO05D007745 3.5e-124 448.7 296 73.0
VMungo0251G1767 Vigna mungo HOM05D006150 ORTHO05D007745 6.0e-124 448.0 280 73.6
Phvul.003G225600 Phaseolus vulgaris HOM05D006150 ORTHO05D007745 7.8e-124 447.6 279 74.2
Thhalv10026866m.g Eutrema salsugineum HOM05D006150 ORTHO05D007745 1.3e-123 446.8 317 71.6
Ca_22017_v3 Cicer arietinum L. HOM05D006150 ORTHO05D007745 2.3e-123 446.0 298 72.5
TPR.G25747 Trifolium pratense HOM05D006150 ORTHO05D007745 3.0e-123 445.7 300 71.7
QL12p008732 Quercus lobata HOM05D006150 ORTHO05D007745 5.6e-122 441.4 399 57.6
unitig_746.g26644 Utricularia gibba HOM05D006150 ORTHO05D007745 7.3e-122 441.0 297 70.4
HPP92_025744 Vanilla planifolia HOM05D006150 ORTHO05D007745 2.4e-120 436.0 296 70.9
Zm00001eb322060 Zea mays HOM05D006150 ORTHO05D007745 8.9e-120 434.1 311 67.8
BcaC09g50439 Brassica carinata HOM05D006150 ORTHO05D007745 3.8e-118 428.7 301 70.4
C01p25410 Brassica napus HOM05D006150 ORTHO05D007745 3.8e-118 428.7 301 70.4
Peaxi162Scf00301g00519 Petunia axillaris HOM05D006150 ORTHO05D007745 1.4e-117 426.8 285 71.9
Actinidia02195 Actinidia chinensis HOM05D006150 ORTHO05D007745 7.1e-117 424.5 257 78.6
Dinv28876 Davidia involucrata HOM05D006150 ORTHO05D007745 1.9e-114 416.4 246 80.9
vmacro00832 Vaccinium macrocarpon HOM05D006150 ORTHO05D007745 7.3e-114 414.5 296 69.6
Psat4g076080 Pisum sativum HOM05D006150 ORTHO05D007745 1.8e-112 409.8 277 72.6
Aa31LG2G13130 Aethionema arabicum HOM05D006150 ORTHO05D007745 3.1e-112 409.1 304 66.1
SEGI_33649 Sequoiadendron giganteum HOM05D006150 ORTHO05D007745 6.9e-112 407.9 301 67.4
Sc01g0007980 Simmondsia chinensis HOM05D006150 ORTHO05D007745 1.2e-108 397.1 239 77.0
Prupe.5G055300 Prunus persica HOM05D006150 ORTHO05D007745 4.8e-105 385.2 212 85.4
Pp3c9_12580 Physcomitrium patens HOM05D006150 ORTHO05D007745 2.0e-103 379.8 305 62.6
Mapoly0072s0097 Marchantia polymorpha HOM05D006150 ORTHO05D007745 9.9e-103 377.5 318 58.8
AagrBONN_evm.TU.Sc2ySwM_228.2274 Anthoceros agrestis HOM05D006150 ORTHO05D007745 7.1e-101 371.3 256 69.1
Oeu012348.1 Olea europaea HOM05D006150 ORTHO05D007745 5.1e-99 365.2 211 82.0
GSVIVG01003685001 Vitis vinifera HOM05D006150 ORTHO05D007745 8.7e-99 364.4 283 64.3
SGA_v2.0_scaffold181G39680 Striga asiatica HOM05D006150 ORTHO05D007745 1.9e-93 346.7 243 72.4
AUR62018839 Chenopodium quinoa HOM05D006150 ORTHO05D007745 3.5e-92 342.4 202 77.7
AUR62007167 Chenopodium quinoa HOM05D006150 ORTHO05D007745 3.9e-91 339.0 202 77.7
Lsat_1_v5_gn_3_15361 Lactuca sativa HOM05D006150 ORTHO05D007745 5.6e-90 335.1 248 66.5
Actinidia25909 Actinidia chinensis HOM05D006150 ORTHO05D007745 4.2e-77 292.4 293 54.9
Potri.001G150800 Populus trichocarpa HOM05D006150 ORTHO05D007745 3.3e-74 282.7 199 74.4
MCO07G379 Micromonas commoda HOM05D006150 ORTHO05D007745 1.2e-68 264.2 269 49.4
MD06G1047100 Malus domestica HOM05D006150 ORTHO05D007745 7.9e-68 261.5 263 54.8
Cre06.g290000 Chlamydomonas reinhardtii HOM05D006150 ORTHO05D007745 5.7e-66 255.4 259 50.2
Sabra01G0120800 Salix brachista HOM05D006150 ORTHO05D007745 2.0e-58 230.3 175 66.9
MELO3C014174.2 Cucumis melo HOM05D006150 ORTHO05D007745 1.6e-55 220.7 290 47.6
Hma1.2p1_0570F.1_g180440 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 1.0e-54 218.0 128 79.7
MCO04G282 Micromonas commoda HOM05D006150 ORTHO05D007745 1.0e-54 218.0 262 45.4
FAN18G0603 Fragaria x ananassa HOM05D006150 ORTHO05D007745 2.1e-52 210.3 146 71.9
CSS0048254 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 9.1e-40 168.3 97 81.4
PSO717G0125 Papaver somniferum HOM05D006150 ORTHO05D007745 2.3e-38 163.7 101 76.2
Sabra01G0120600 Salix brachista HOM05D006150 ORTHO05D007745 2.5e-37 160.2 162 56.2
BcaC01g03436 Brassica carinata HOM05D006150 ORTHO05D007745 1.4e-32 144.4 110 62.7
Cpa.g.sc98.38 Carica papaya HOM05D006150 ORTHO05D007745 1.6e-31 141.0 81 76.5
CBR_g38093 Chara braunii HOM05D006150 ORTHO05D007745 1.6e-28 131.0 66 83.3
GSVIVG01021810001 Vitis vinifera HOM05D006150 ORTHO05D007745 4.0e-19 99.8 76 64.5
Cpa.g.sc98.35 Carica papaya HOM05D006150 ORTHO05D007745 1.4e-16 91.3 56 75.0
Oeu040463.1 Olea europaea HOM05D001574 ORTHO05D000708 1.5e-10 71.2 57 61.4
Lsat_1_v5_gn_6_74120 Lactuca sativa HOM05D006150 ORTHO05D233887 1.6e-07 61.2 33 78.8
MELO3C000773.2 Cucumis melo HOM05D006150 ORTHO05D007745 1.7e-06 57.8 39 74.4
Cpa.g.sc3814.1 Carica papaya HOM05D006150 ORTHO05D007745 5.1e-06 56.2 35 68.6


User provided reference genes

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