Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G052200 Manihot esculenta HOM05D007361 ORTHO05D009239 5.2e-88 327.8 178 100.0
Potri.001G089500 Populus trichocarpa HOM05D007361 ORTHO05D009239 1.9e-50 203.0 180 60.0
QL02p030053 Quercus lobata HOM05D007361 ORTHO05D009239 2.1e-49 199.5 178 61.2
TAR629G1962 Trochodendron aralioides HOM05D007361 ORTHO05D009239 1.8e-48 196.4 174 58.0
Duzib205G2046 Durio zibethinus HOM05D007361 ORTHO05D009239 2.2e-46 189.5 180 55.0
Sabra01G0065600 Salix brachista HOM05D007361 ORTHO05D009239 1.6e-44 183.3 166 66.9
Cpa.g.sc634.2 Carica papaya HOM05D007361 ORTHO05D009239 2.7e-44 182.6 178 64.6
Thecc.03G300700 Theobroma cacao HOM05D007361 ORTHO05D009239 4.6e-44 181.8 169 57.4
TWI60G0282 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 1.3e-43 180.3 153 61.4
Gohir.A12G237900 Gossypium hirsutum HOM05D007361 ORTHO05D009239 2.5e-42 176.0 181 54.1
TWI81G0394 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 2.5e-42 176.0 155 60.6
Potri.003G141700 Populus trichocarpa HOM05D007361 ORTHO05D009239 3.3e-42 175.6 165 66.7
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 1.1e-40 170.6 180 61.7
Prupe.5G122800 Prunus persica HOM05D007361 ORTHO05D009239 1.1e-40 170.6 154 58.4
Haze_09090 Corylus avellana HOM05D007361 ORTHO05D009239 3.1e-40 169.1 150 66.7
GSVIVG01019560001 Vitis vinifera HOM05D007361 ORTHO05D009239 9.0e-40 167.5 143 55.9
Gorai.008G256100 Gossypium raimondii HOM05D007361 ORTHO05D009239 1.3e-38 163.7 181 51.4
CiPaw.12G081300 Carya illinoinensis HOM05D007361 ORTHO05D009239 3.8e-38 162.2 159 65.4
Gohir.D12G239000 Gossypium hirsutum HOM05D007361 ORTHO05D009239 8.4e-38 161.0 167 53.3
Sc01g0010390 Simmondsia chinensis HOM05D007361 ORTHO05D009239 9.3e-37 157.5 108 66.7
PGR031G2691 Punica granatum HOM05D007361 ORTHO05D009239 1.2e-36 157.1 182 52.2
Lj4g0006418 Lotus japonicus HOM05D007361 ORTHO05D009239 2.1e-36 156.4 161 52.8
arahy.Tifrunner.gnm1.ann1.F7VJVA Arachis hypogaea HOM05D007361 ORTHO05D009239 4.6e-36 155.2 182 52.7
Dinv37514 Davidia involucrata HOM05D007361 ORTHO05D009239 6.0e-36 154.8 164 56.1
arahy.Tifrunner.gnm1.ann1.LM2PGP Arachis hypogaea HOM05D007361 ORTHO05D009239 1.3e-35 153.7 95 77.9
Lalb_Chr09g0332251 Lupinus albus HOM05D007361 ORTHO05D009239 1.8e-35 153.3 173 60.1
Aqoxy5G04283 Aquilegia oxysepala HOM05D007361 ORTHO05D009239 3.0e-35 152.5 184 47.3
Nn1g00257 Nelumbo nucifera HOM05D007361 ORTHO05D009239 3.9e-35 152.1 158 54.4
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 6.7e-35 151.4 99 69.7
Ciclev10024054m.g Citrus clementina HOM05D007361 ORTHO05D009239 1.5e-34 150.2 88 76.1
PSO782G1801 Papaver somniferum HOM05D007361 ORTHO05D009239 1.5e-34 150.2 104 65.4
Peaxi162Scf00074g00624 Petunia axillaris HOM05D007361 ORTHO05D009239 1.5e-34 150.2 176 49.4
ECA246G3595 Erigeron canadensis HOM05D007361 ORTHO05D009239 9.7e-34 147.5 115 62.6
Cc08_g16280 Coffea canephora HOM05D007361 ORTHO05D009239 1.6e-33 146.7 112 60.7
MSTRG.1799 Avicennia marina HOM05D007361 ORTHO05D009239 3.7e-33 145.6 100 67.0
MELO3C016276.2 Cucumis melo HOM05D007361 ORTHO05D009239 3.7e-33 145.6 106 67.0
Sopen08g030820 Solanum pennellii HOM05D007361 ORTHO05D009239 3.7e-33 145.6 110 61.8
Sabra03G0102300 Salix brachista HOM05D007361 ORTHO05D009239 4.8e-33 145.2 72 87.5
Solyc08g082570.4 Solanum lycopersicum HOM05D007361 ORTHO05D009239 4.8e-33 145.2 110 61.8
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 6.3e-33 144.8 78 85.9
RcHm_v2.0_Chr7g0194141 Rosa chinensis HOM05D007361 ORTHO05D009239 8.2e-33 144.4 155 52.9
Hund14207 Selenicereus undatus HOM05D007361 ORTHO05D009239 8.2e-33 144.4 122 58.2
PGSC0003DMG400012265 Solanum tuberosum HOM05D007361 ORTHO05D009239 8.2e-33 144.4 94 69.1
Ca_17469_v3 Cicer arietinum L. HOM05D007361 ORTHO05D009239 1.1e-32 144.1 108 64.8
Nitab4.5_0000798g0080 Nicotiana tabacum HOM05D007361 ORTHO05D009239 1.1e-32 144.1 194 45.9
Actinidia27311 Actinidia chinensis HOM05D007361 ORTHO05D009239 1.4e-32 143.7 71 85.9
ClCG07G011490 Citrullus lanatus HOM05D007361 ORTHO05D009239 1.8e-32 143.3 110 66.4
CsaV3_4G006730 Cucumis sativus L. HOM05D007361 ORTHO05D009239 1.8e-32 143.3 88 76.1
Eucgr.D01759 Eucalyptus grandis HOM05D007361 ORTHO05D009239 2.4e-32 142.9 75 84.0
FvH4_5g04930 Fragaria vesca HOM05D007361 ORTHO05D009239 2.4e-32 142.9 154 62.3
FAN18G1776 Fragaria x ananassa HOM05D007361 ORTHO05D009239 2.4e-32 142.9 154 62.3
THA.LOC104817582 Tarenaya hassleriana HOM05D007361 ORTHO05D009239 3.1e-32 142.5 114 61.4
ATR0602G025 Amborella trichopoda HOM05D007361 ORTHO05D009239 4.1e-32 142.1 135 56.3
Glyma.08G024100 Glycine max HOM05D007361 ORTHO05D009239 4.1e-32 142.1 76 81.6
Os01g0235100 Oryza sativa ssp. japonica HOM05D007361 ORTHO05D009239 5.3e-32 141.7 99 67.7
Phvul.002G299900 Phaseolus vulgaris HOM05D007361 ORTHO05D009239 6.9e-32 141.4 178 48.9
TPR.G3427 Trifolium pratense HOM05D007361 ORTHO05D009239 6.9e-32 141.4 181 48.6
FAN13G1516 Fragaria x ananassa HOM05D007361 ORTHO05D009239 9.0e-32 141.0 154 61.7
HanXRQChr17g0534961 Helianthus annuus HOM05D007361 ORTHO05D009239 1.2e-31 140.6 104 65.4
AUR62019861 Chenopodium quinoa HOM05D007361 ORTHO05D009239 2.0e-31 139.8 172 46.5
FAN18G2902 Fragaria x ananassa HOM05D007361 ORTHO05D009239 2.6e-31 139.4 154 61.7
Glyma.05G218000 Glycine max HOM05D007361 ORTHO05D009239 3.4e-31 139.0 156 48.7
Psat7g024200 Pisum sativum HOM05D007361 ORTHO05D009239 3.4e-31 139.0 86 75.6
Sed0017120 Sechium edule HOM05D007361 ORTHO05D009239 3.4e-31 139.0 104 65.4
vmacro11341 Vaccinium macrocarpon HOM05D007361 ORTHO05D009239 3.4e-31 139.0 72 84.7
Ah.12g052700 Amaranthus hybridus HOM05D007361 ORTHO05D009239 4.5e-31 138.7 99 63.6
CANSAT21G1668 Cannabis sativa HOM05D007361 ORTHO05D009239 5.9e-31 138.3 81 74.1
DCAR_006523 Daucus carota HOM05D007361 ORTHO05D009239 1.0e-30 137.5 150 54.0
Nitab4.5_0008496g0040 Nicotiana tabacum HOM05D007361 ORTHO05D009239 1.3e-30 137.1 90 70.0
Medtr8g099615 Medicago truncatula HOM05D007361 ORTHO05D009239 1.7e-30 136.7 113 58.4
SGA_v2.0_scaffold111G31398 Striga asiatica HOM05D007361 ORTHO05D009239 1.7e-30 136.7 77 76.6
SalBow8G1606 Salvia bowleyana HOM05D007361 ORTHO05D009239 2.2e-30 136.3 73 80.8
HPP92_002926 Vanilla planifolia HOM05D007361 ORTHO05D009239 2.2e-30 136.3 65 87.7
Aa31LG9G130 Aethionema arabicum HOM05D007361 ORTHO05D009239 3.8e-30 135.6 92 68.5
Migut.E01281 Erythranthe guttata HOM05D007361 ORTHO05D009239 5.0e-30 135.2 91 67.0
CSS0025387 Camellia sinensis var. sinensis HOM05D007361 ORTHO05D009239 8.5e-30 134.4 84 77.4
CAN.G567.14 Capsicum annuum HOM05D007361 ORTHO05D009239 8.5e-30 134.4 96 65.6
AT5G42070 Arabidopsis thaliana HOM05D007361 ORTHO05D009239 1.1e-29 134.0 104 63.5
CDE10G0162 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 1.4e-29 133.7 106 57.5
Thhalv10026457m.g Eutrema salsugineum HOM05D007361 ORTHO05D009239 1.4e-29 133.7 86 72.1
SEGI_33878 Sequoiadendron giganteum HOM05D007361 ORTHO05D009239 1.9e-29 133.3 69 84.1
Carub.0007s3327 Capsella rubella HOM05D007361 ORTHO05D009239 4.2e-29 132.1 99 62.6
EL10Ac5g12938 Beta vulgaris HOM05D007361 ORTHO05D009239 7.2e-29 131.3 88 69.3
CDE10G0255 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 7.2e-29 131.3 65 83.1
CARHR212500 Cardamine hirsuta HOM05D007361 ORTHO05D009239 1.6e-28 130.2 91 64.8
BcaB02g07865 Brassica carinata HOM05D007361 ORTHO05D009239 3.6e-28 129.0 92 65.2
BcaC02g08893 Brassica carinata HOM05D007361 ORTHO05D009239 3.6e-28 129.0 92 67.4
C04p49390 Brassica napus HOM05D007361 ORTHO05D009239 3.6e-28 129.0 92 67.4
BolC4t26525H Brassica oleracea HOM05D000331 ORTHO05D000732 4.6e-28 128.6 92 67.4
BcaC08g44581 Brassica carinata HOM05D007361 ORTHO05D009239 6.1e-28 128.3 92 65.2
C06p20480 Brassica napus HOM05D007361 ORTHO05D009239 6.1e-28 128.3 92 65.2
BolC6t37229H Brassica oleracea HOM05D000331 ORTHO05D000732 6.1e-28 128.3 92 65.2
Sp7g00060 Schrenkiella parvula HOM05D007361 ORTHO05D009239 6.1e-28 128.3 88 69.3
AagrBONN_evm.TU.Sc2ySwM_362.1194 Anthoceros agrestis HOM05D007361 ORTHO05D009239 1.0e-27 127.5 107 58.9
A07p21120 Brassica napus HOM05D007361 ORTHO05D009239 1.0e-27 127.5 75 74.7
BraA07t29798Z Brassica rapa HOM05D007361 ORTHO05D009239 1.0e-27 127.5 75 74.7
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 1.1e-26 124.0 98 61.2
unitig_0.g323 Utricularia gibba HOM05D007361 ORTHO05D009239 1.5e-26 123.6 100 59.0
A04p15160 Brassica napus HOM05D007361 ORTHO05D009239 4.3e-26 122.1 67 79.1
Mapoly0039s0013 Marchantia polymorpha HOM05D007361 ORTHO05D009239 4.3e-26 122.1 68 77.9
SMO340G0222 Selaginella moellendorffii HOM05D007361 ORTHO05D009239 6.3e-25 118.2 91 62.6
Pp3c20_23090 Physcomitrium patens HOM05D007361 ORTHO05D009239 2.0e-23 113.2 83 59.0
Lsat_1_v5_gn_3_11260 Lactuca sativa HOM05D007361 ORTHO05D009239 1.3e-22 110.5 94 58.5
CBR_g8730 Chara braunii HOM05D003343 ORTHO05D003787 6.5e-22 108.2 65 69.2
MCO14G090 Micromonas commoda HOM05D007361 ORTHO05D009239 1.3e-14 84.0 70 52.9
Cre02.g074100 Chlamydomonas reinhardtii HOM05D007361 ORTHO05D009239 1.4e-13 80.5 78 44.9
PRCOL_00001131 Prasinoderma coloniale HOM05D007361 ORTHO05D009239 1.1e-08 64.3 76 40.8
MBI06_g44793_MAGBIO Magnolia biondii HOM05D007361 ORTHO05D009239 2.9e-06 56.2 125 33.6


User provided reference genes

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