Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G049500 Manihot esculenta HOM05D005777 ORTHO05D006854 3.1e-287 991.1 503 100.0
Potri.007G058050 Populus trichocarpa HOM05D005777 ORTHO05D006854 1.2e-86 324.7 582 40.4
CiPaw.11G117200 Carya illinoinensis HOM05D005777 ORTHO05D006854 4.0e-85 319.7 480 44.0
Atru.chr9.1942 Acer truncatum HOM05D005777 ORTHO05D006854 5.4e-82 309.3 291 58.1
TWI60G0567 Tripterygium wilfordii HOM05D005777 ORTHO05D006854 2.1e-81 307.4 299 56.5
Cpa.g.sc79.3 Carica papaya HOM05D005777 ORTHO05D006854 4.7e-78 296.2 542 39.1
Cfa011969 Carpinus fangiana HOM05D005777 ORTHO05D006854 2.7e-73 280.4 309 54.0
RcHm_v2.0_Chr7g0186161 Rosa chinensis HOM05D005777 ORTHO05D006854 2.4e-69 267.3 284 53.2
CSS0003604 Camellia sinensis var. sinensis HOM05D005777 ORTHO05D006854 1.5e-68 264.6 283 53.0
Haze_09107 Corylus avellana HOM05D005777 ORTHO05D006854 3.8e-67 260.0 254 58.3
Prupe.5G124500 Prunus persica HOM05D005777 ORTHO05D006854 1.1e-66 258.5 310 49.7
Glyma.05G218900 Glycine max HOM05D005777 ORTHO05D006854 3.2e-66 256.9 253 56.1
Glyma.08G025000 Glycine max HOM05D005777 ORTHO05D006854 3.2e-66 256.9 254 56.3
Sabra07G0049700 Salix brachista HOM05D005777 ORTHO05D006854 4.2e-66 256.5 283 53.0
Oeu055021.1 Olea europaea HOM05D005777 ORTHO05D006854 1.2e-65 255.0 340 44.1
FAN04G0792 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.6e-65 254.6 310 48.1
FvH4_5g11630 Fragaria vesca HOM05D005777 ORTHO05D006854 2.7e-65 253.8 310 48.1
FAN13G2465 Fragaria x ananassa HOM05D005777 ORTHO05D006854 3.9e-64 250.0 310 47.7
Psat7g024000 Pisum sativum HOM05D005777 ORTHO05D006854 5.1e-64 249.6 273 51.6
QL02p029612 Quercus lobata HOM05D005777 ORTHO05D006854 6.7e-64 249.2 258 55.4
MD06G1111700 Malus domestica HOM05D005777 ORTHO05D006854 9.6e-63 245.4 415 40.7
Nitab4.5_0002793g0030 Nicotiana tabacum HOM05D005777 ORTHO05D006854 9.6e-63 245.4 279 50.9
Eucgr.E00747 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.3e-62 245.0 277 50.9
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 1.6e-62 244.6 273 49.5
Lalb_Chr05g0223951 Lupinus albus HOM05D005777 ORTHO05D006854 6.2e-62 242.7 271 52.8
vmacro13879 Vaccinium macrocarpon HOM05D005777 ORTHO05D006854 6.2e-62 242.7 306 44.8
Eucgr.E00956 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.1e-61 241.9 309 46.9
Phvul.002G300700 Phaseolus vulgaris HOM05D005777 ORTHO05D006854 1.8e-61 241.1 251 54.2
Lj4g0026879 Lotus japonicus HOM05D005777 ORTHO05D006854 5.3e-61 239.6 278 52.2
Nitab4.5_0002367g0090 Nicotiana tabacum HOM05D005777 ORTHO05D006854 6.9e-61 239.2 269 50.9
Eucgr.E00744 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.5e-60 236.5 309 46.3
Migut.E00735 Erythranthe guttata HOM05D005777 ORTHO05D006854 1.3e-59 235.0 274 48.2
Sed0007946 Sechium edule HOM05D005777 ORTHO05D006854 1.3e-59 235.0 250 54.4
CsaV3_5G001940 Cucumis sativus L. HOM05D005777 ORTHO05D006854 2.2e-59 234.2 315 47.6
Medtr8g099725 Medicago truncatula HOM05D005777 ORTHO05D006854 2.2e-59 234.2 272 50.0
Peaxi162Scf00074g00526 Petunia axillaris HOM05D005777 ORTHO05D006854 3.8e-59 233.4 264 51.9
MELO3C033830.2 Cucumis melo HOM05D005777 ORTHO05D006854 4.9e-59 233.0 288 48.3
CANSAT21G0853 Cannabis sativa HOM05D005777 ORTHO05D006854 3.2e-58 230.3 284 46.5
Lj8C204T6 Lonicera japonica HOM05D005777 ORTHO05D006854 3.2e-58 230.3 282 46.8
PGR042G2859 Punica granatum HOM05D005777 ORTHO05D006854 7.9e-57 225.7 525 35.0
Sopen08g030950 Solanum pennellii HOM05D005777 ORTHO05D006854 1.8e-56 224.6 274 49.6
Cc08_g16390 Coffea canephora HOM05D005777 ORTHO05D006854 2.3e-56 224.2 285 47.7
Solyc08g082720.4 Solanum lycopersicum HOM05D005777 ORTHO05D006854 3.0e-56 223.8 274 49.6
PGSC0003DMG400012134 Solanum tuberosum HOM05D005777 ORTHO05D006854 3.9e-56 223.4 275 48.7
TAR629G1222 Trochodendron aralioides HOM05D005777 ORTHO05D006854 8.7e-56 222.2 283 46.6
Sc01g0010430 Simmondsia chinensis HOM05D005777 ORTHO05D006854 1.5e-55 221.5 291 46.4
Migut.E01651 Erythranthe guttata HOM05D005777 ORTHO05D006854 5.6e-55 219.5 281 47.0
Gohir.A02G088000 Gossypium hirsutum HOM05D005777 ORTHO05D006854 1.6e-54 218.0 411 37.7
CAN.G567.32 Capsicum annuum HOM05D005777 ORTHO05D006854 2.1e-54 217.6 273 47.3
Eucgr.E00762 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.4e-53 214.2 295 45.1
Gorai.005G117300 Gossypium raimondii HOM05D005777 ORTHO05D006854 9.0e-53 212.2 370 38.9
Eucgr.E00939 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.5e-52 211.5 221 53.4
Lsat_1_v5_gn_6_83361 Lactuca sativa HOM05D005777 ORTHO05D006854 1.0e-51 208.8 270 47.0
EL10Ac5g12951 Beta vulgaris HOM05D005777 ORTHO05D006854 1.3e-51 208.4 292 44.5
Ah.12g052840 Amaranthus hybridus HOM05D005777 ORTHO05D006854 1.7e-51 208.0 269 46.1
Hund14203 Selenicereus undatus HOM05D005777 ORTHO05D006854 1.7e-51 208.0 278 42.4
ECA240G0322 Erigeron canadensis HOM05D005777 ORTHO05D006854 2.2e-51 207.6 271 45.8
HanXRQChr03g0083721 Helianthus annuus HOM05D005777 ORTHO05D006854 4.9e-51 206.5 267 46.1
TPR.G3378 Trifolium pratense HOM05D005777 ORTHO05D006854 1.4e-50 204.9 331 40.8
Ca_17460_v3 Cicer arietinum L. HOM05D005777 ORTHO05D006854 1.6e-49 201.4 390 37.7
Eucgr.E00752 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.1e-49 201.1 378 36.2
Duzib116G0305 Durio zibethinus HOM05D005777 ORTHO05D006854 1.8e-48 198.0 393 37.7
FAN18G2480 Fragaria x ananassa HOM05D005777 ORTHO05D006854 5.7e-47 193.0 313 39.3
MBI07_g24771_MAGBIO Magnolia biondii HOM05D005777 ORTHO05D006854 5.7e-47 193.0 253 45.1
Nn1g00296 Nelumbo nucifera HOM05D005777 ORTHO05D006854 6.3e-46 189.5 265 42.6
Thecc.08G166000 Theobroma cacao HOM05D005777 ORTHO05D006854 1.8e-45 188.0 449 33.4
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 1.0e-43 182.2 262 42.4
Aqoxy5G04312 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 5.0e-43 179.9 273 44.3
PSO170G4328 Papaver somniferum HOM05D005777 ORTHO05D006854 1.4e-42 178.3 252 42.9
AUR62019875 Chenopodium quinoa HOM05D005777 ORTHO05D006854 2.5e-39 167.5 249 41.4
VMungo0251G0419 Vigna mungo HOM05D003100 ORTHO05D003533 2.5e-39 167.5 267 39.3
Ciclev10023944m.g Citrus clementina HOM05D005777 ORTHO05D006854 3.3e-39 167.2 238 42.4
GSVIVG01019597001 Vitis vinifera HOM05D005777 ORTHO05D006854 2.2e-38 164.5 134 63.4
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 4.8e-38 163.3 356 35.7
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 1.1e-37 162.2 265 41.1
Ciclev10023874m.g Citrus clementina HOM05D005777 ORTHO05D006854 1.5e-36 158.3 184 52.2
Eucgr.E00749 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.6e-33 148.3 175 49.7
Eucgr.E00969 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.6e-33 148.3 175 49.7
ATR0602G092 Amborella trichopoda HOM05D005777 ORTHO05D006854 1.0e-32 145.6 278 36.3
Eucgr.E00900 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.4e-32 145.2 175 48.6
Eucgr.E01013 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.8e-32 144.8 175 49.1
Eucgr.E00726 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.5e-31 141.7 145 54.5
FAN18G2579 Fragaria x ananassa HOM05D005777 ORTHO05D006854 2.0e-31 141.4 302 33.8
DCAR_006511 Daucus carota HOM05D005777 ORTHO05D006854 1.7e-30 138.3 273 34.4
Thhalv10028849m.g Eutrema salsugineum HOM05D005777 ORTHO05D006854 1.7e-30 138.3 177 48.0
FAN08G0729 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.7e-30 138.3 283 35.0
HPP92_024143 Vanilla planifolia HOM05D005777 ORTHO05D006854 1.7e-30 138.3 252 37.3
SGA_v2.0_scaffold74G24601 Striga asiatica HOM05D005777 ORTHO05D006854 1.8e-29 134.8 277 32.1
THA.LOC104813047 Tarenaya hassleriana HOM05D005777 ORTHO05D006854 7.0e-29 132.9 180 46.7
Eucgr.E00696 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.5e-28 131.7 147 49.0
FAN04G0565 Fragaria x ananassa HOM05D005777 ORTHO05D006854 7.7e-28 129.4 100 66.0
Lsat_1_v5_gn_9_112141 Lactuca sativa HOM05D005777 ORTHO05D006854 1.2e-25 122.1 150 50.0
Eucgr.E00912 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.6e-25 121.7 117 55.6
Eucgr.E00895 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.4e-24 118.6 125 48.8
Sp6g06640 Schrenkiella parvula HOM05D005777 ORTHO05D006854 1.8e-24 118.2 388 31.2
CARHR255730 Cardamine hirsuta HOM05D005777 ORTHO05D006854 3.0e-24 117.5 180 45.0
Carub.0006s2962 Capsella rubella HOM05D005777 ORTHO05D006854 2.0e-23 114.8 175 43.4
AUR62007011 Chenopodium quinoa HOM05D005777 ORTHO05D006854 4.4e-23 113.6 412 29.6
AL6G44960 Arabidopsis lyrata HOM05D005777 ORTHO05D006854 1.3e-22 112.1 175 41.7
AT4G10890 Arabidopsis thaliana HOM05D005777 ORTHO05D006854 2.2e-22 111.3 176 41.5
BraA09t38398Z Brassica rapa HOM05D005777 ORTHO05D006854 2.2e-22 111.3 177 41.2
BcaB01g01556 Brassica carinata HOM05D005777 ORTHO05D006854 4.8e-22 110.2 180 42.8
C09p35860 Brassica napus HOM05D005777 ORTHO05D006854 6.3e-22 109.8 177 42.9
Os09g0363400 Oryza sativa ssp. japonica HOM05D005777 ORTHO05D006854 3.1e-21 107.5 301 29.6
Eucgr.E00894 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.3e-21 106.7 91 58.2
BolC9t56419H Brassica oleracea HOM05D005777 ORTHO05D006854 7.0e-21 106.3 177 42.4
Gohir.D02G103200 Gossypium hirsutum HOM05D005777 ORTHO05D006854 1.6e-20 105.1 289 31.1
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 1.6e-20 105.1 109 52.3
Aa31LG9G11240 Aethionema arabicum HOM05D005777 ORTHO05D006854 2.6e-20 104.4 109 55.0
BcaC04g21086 Brassica carinata HOM05D005777 ORTHO05D006854 2.6e-20 104.4 177 41.2
CDE03G0022 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 2.2e-19 101.3 94 53.2
Actinidia27306 Actinidia chinensis HOM05D005777 ORTHO05D006854 3.8e-19 100.5 66 68.2
A09p28290 Brassica napus HOM05D005777 ORTHO05D006854 3.8e-19 100.5 177 39.5
Eucgr.E00686 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.2e-18 97.4 89 52.8
Lsat_1_v5_gn_5_82800 Lactuca sativa HOM05D005777 ORTHO05D006854 5.5e-18 96.7 202 35.6
Eucgr.H03743 Eucalyptus grandis HOM05D005777 ORTHO05D006854 9.7e-15 85.9 79 58.2
SHI06955 Sapria himalayana HOM05D005777 ORTHO05D006854 1.3e-14 85.5 107 45.8
QL06p042986 Quercus lobata HOM05D000529 ORTHO05D000472 2.8e-14 84.3 106 46.2
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis HOM05D005777 ORTHO05D006854 4.7e-09 67.0 82 51.2
Hma1.2p1_0338F.1_g129700 Hydrangea macrophylla HOM05D005777 ORTHO05D006854 6.8e-08 63.2 69 52.2
SHI06954 Sapria himalayana HOM05D000023 ORTHO05D000014 6.8e-08 63.2 109 42.2
Eucgr.H03760 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.4e-07 60.8 59 55.9
Lsat_1_v5_gn_3_40061 Lactuca sativa HOM05D005777 ORTHO05D006854 3.4e-07 60.8 39 66.7
PSO063G6181 Papaver somniferum HOM05D005777 ORTHO05D006854 4.4e-07 60.5 42 57.1
FAN18G0036 Fragaria x ananassa HOM05D005777 ORTHO05D006854 5.7e-07 60.1 31 83.9


User provided reference genes

Program Settings