Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G047215 Manihot esculenta HOM05D006669 ORTHO05D008440 1.3e-114 416.4 200 100.0
Manes.07G077122 Manihot esculenta HOM05D006669 ORTHO05D008440 1.0e-79 300.4 143 100.0
Manes.01G247604 Manihot esculenta HOM05D006669 ORTHO05D008440 1.7e-50 203.4 102 98.0
Potri.007G052400 Populus trichocarpa HOM05D006669 ORTHO05D008440 2.3e-44 183.0 96 82.3
Sabra07G0046000 Salix brachista HOM05D006669 ORTHO05D008440 6.8e-44 181.4 96 80.2
Atru.chr3.203 Acer truncatum HOM05D006669 ORTHO05D008440 3.5e-40 169.1 96 77.1
MD15G1293100 Malus domestica HOM05D006669 ORTHO05D008440 1.3e-39 167.2 96 71.9
Rhsim08G0095700 Rhododendron simsii HOM05D006669 ORTHO05D008440 1.3e-39 167.2 96 74.0
Eucgr.I00723 Eucalyptus grandis HOM05D006669 ORTHO05D008440 2.3e-39 166.4 98 73.5
Cpa.g.sc6.52 Carica papaya HOM05D006669 ORTHO05D008440 6.6e-39 164.9 96 76.0
Ciclev10027520m.g Citrus clementina HOM05D006669 ORTHO05D008440 8.6e-39 164.5 96 74.0
Actinidia16443 Actinidia chinensis HOM05D006669 ORTHO05D008440 1.1e-38 164.1 96 72.9
Actinidia21236 Actinidia chinensis HOM05D006669 ORTHO05D008440 1.1e-38 164.1 96 72.9
QL06p039919 Quercus lobata HOM05D006669 ORTHO05D008440 1.9e-38 163.3 95 71.6
COL.COLO4_11531 Corchorus olitorius HOM05D006669 ORTHO05D008440 3.3e-38 162.5 96 72.9
FAN28G0180 Fragaria x ananassa HOM05D006669 ORTHO05D008440 3.3e-38 162.5 96 70.8
Nitab4.5_0004400g0020 Nicotiana tabacum HOM05D006669 ORTHO05D008440 4.3e-38 162.2 154 52.6
GSVIVG01000155001 Vitis vinifera HOM05D006669 ORTHO05D008440 4.3e-38 162.2 96 70.8
RcHm_v2.0_Chr2g0107341 Rosa chinensis HOM05D006669 ORTHO05D008440 9.5e-38 161.0 96 69.8
Haze_15316 Corylus avellana HOM05D006669 ORTHO05D008440 1.2e-37 160.6 90 74.4
Cc07_g06760 Coffea canephora HOM05D006669 ORTHO05D008440 1.6e-37 160.2 96 69.8
Glyma.01G191500 Glycine max HOM05D006669 ORTHO05D008440 2.1e-37 159.8 95 69.5
Glyma.11G050600 Glycine max HOM05D006669 ORTHO05D008440 2.1e-37 159.8 95 69.5
Duzib147G0464 Durio zibethinus HOM05D006669 ORTHO05D008440 2.8e-37 159.5 96 71.9
Gohir.D03G027000 Gossypium hirsutum HOM05D006669 ORTHO05D008440 2.8e-37 159.5 96 74.0
Gorai.003G028700 Gossypium raimondii HOM05D006669 ORTHO05D008440 2.8e-37 159.5 96 74.0
CANSAT01G1540 Cannabis sativa HOM05D006669 ORTHO05D008440 3.6e-37 159.1 98 68.4
Gohir.A02G153400 Gossypium hirsutum HOM05D006669 ORTHO05D008440 3.6e-37 159.1 96 74.0
CSS0011361 Camellia sinensis var. sinensis HOM05D006669 ORTHO05D008440 6.1e-37 158.3 92 72.8
CSS0012464 Camellia sinensis var. sinensis HOM05D006669 ORTHO05D008440 6.1e-37 158.3 92 72.8
Lalb_Chr09g0323441 Lupinus albus HOM05D006669 ORTHO05D008440 6.1e-37 158.3 96 68.8
THA.LOC104807621 Tarenaya hassleriana HOM05D006669 ORTHO05D008440 6.1e-37 158.3 95 70.5
Psat0s1712g0160 Pisum sativum HOM05D006669 ORTHO05D008440 1.0e-36 157.5 94 70.2
TWI53G1681 Tripterygium wilfordii HOM05D006669 ORTHO05D008440 1.0e-36 157.5 94 69.1
Solyc02g064740.3 Solanum lycopersicum HOM05D006669 ORTHO05D008440 1.4e-36 157.1 95 68.4
Sopen02g014840 Solanum pennellii HOM05D006669 ORTHO05D008440 2.3e-36 156.4 95 68.4
PGSC0003DMG402013020 Solanum tuberosum HOM05D006669 ORTHO05D008440 5.2e-36 155.2 95 67.4
Medtr5g016110 Medicago truncatula HOM05D006669 ORTHO05D008440 6.8e-36 154.8 94 68.1
FAN26G1063 Fragaria x ananassa HOM05D006669 ORTHO05D008440 1.2e-35 154.1 96 66.7
CAN.G1290.5 Capsicum annuum HOM05D006669 ORTHO05D008440 1.5e-35 153.7 95 67.4
Phvul.002G013400 Phaseolus vulgaris HOM05D006669 ORTHO05D008440 2.0e-35 153.3 95 67.4
HanXRQChr12g0376911 Helianthus annuus HOM05D006669 ORTHO05D008440 2.6e-35 152.9 96 62.5
ClCG01G017320 Citrullus lanatus HOM05D006669 ORTHO05D008440 3.4e-35 152.5 96 65.6
Lj2g0024438 Lotus japonicus HOM05D006669 ORTHO05D008440 3.4e-35 152.5 94 67.0
Lj4C159G4 Lonicera japonica HOM05D006669 ORTHO05D008440 4.4e-35 152.1 96 70.8
TPR.G20965 Trifolium pratense HOM05D006669 ORTHO05D008440 1.7e-34 150.2 94 66.0
arahy.Tifrunner.gnm1.ann1.37Y375 Arachis hypogaea HOM05D006669 ORTHO05D008440 2.2e-34 149.8 96 63.5
arahy.Tifrunner.gnm1.ann1.QDP4K1 Arachis hypogaea HOM05D006669 ORTHO05D008440 2.2e-34 149.8 96 63.5
Sed0019482 Sechium edule HOM05D006669 ORTHO05D008440 2.2e-34 149.8 94 67.0
Ca_24710_v3 Cicer arietinum L. HOM05D006669 ORTHO05D008440 2.9e-34 149.4 90 67.8
AL7G13310 Arabidopsis lyrata HOM05D006669 ORTHO05D008440 6.4e-34 148.3 95 63.2
Sp7g35160 Schrenkiella parvula HOM05D006669 ORTHO05D008440 8.3e-34 147.9 95 63.2
AUR62040277 Chenopodium quinoa HOM05D006669 ORTHO05D008440 1.4e-33 147.1 93 64.5
AT4G37480 Arabidopsis thaliana HOM05D006669 ORTHO05D008440 1.8e-33 146.7 95 62.1
Nitab4.5_0001772g0050 Nicotiana tabacum HOM05D006669 ORTHO05D008440 1.8e-33 146.7 84 72.6
Oeu040598.1 Olea europaea HOM05D006669 ORTHO05D008440 1.8e-33 146.7 91 71.4
CARHR245880 Cardamine hirsuta HOM05D006669 ORTHO05D008440 2.4e-33 146.4 95 62.1
FAN19G2999 Fragaria x ananassa HOM05D006669 ORTHO05D008440 2.4e-33 146.4 95 63.2
Aqoxy6G02742 Aquilegia oxysepala HOM05D006669 ORTHO05D008440 5.4e-33 145.2 95 64.2
EL10Ac6g15658 Beta vulgaris HOM05D006669 ORTHO05D008440 1.2e-32 144.1 96 62.5
C03p79320 Brassica napus HOM05D006669 ORTHO05D008440 1.2e-32 144.1 95 62.1
CsaV3_6G043850 Cucumis sativus L. HOM05D006669 ORTHO05D008440 1.2e-32 144.1 97 66.0
Thhalv10024891m.g Eutrema salsugineum HOM05D006669 ORTHO05D008440 1.2e-32 144.1 95 63.2
BcaC01g00401 Brassica carinata HOM05D006669 ORTHO05D008440 1.6e-32 143.7 95 61.1
A08p22660 Brassica napus HOM05D006669 ORTHO05D008440 1.6e-32 143.7 95 61.1
BraA08t34233Z Brassica rapa HOM05D006669 ORTHO05D008440 1.6e-32 143.7 95 61.1
ATR0030G057 Amborella trichopoda HOM05D006669 ORTHO05D008440 2.0e-32 143.3 101 62.4
BolC3t20175H Brassica oleracea HOM05D006669 ORTHO05D008440 2.0e-32 143.3 95 60.0
Carub.0007s0280 Capsella rubella HOM05D006669 ORTHO05D008440 2.7e-32 142.9 95 63.2
Hma1.2p1_1506F.1_g287550 Hydrangea macrophylla HOM05D006669 ORTHO05D008440 3.5e-32 142.5 86 73.3
Migut.H00372 Erythranthe guttata HOM05D006669 ORTHO05D008440 1.0e-31 141.0 94 61.7
BcaB03g12341 Brassica carinata HOM05D006669 ORTHO05D008440 1.3e-31 140.6 95 60.0
ECA246G2447 Erigeron canadensis HOM05D006669 ORTHO05D008440 1.7e-31 140.2 96 60.4
Aa31LG6G14350 Aethionema arabicum HOM05D006669 ORTHO05D008440 3.0e-31 139.4 105 60.0
SGA_v2.0_scaffold15G07411 Striga asiatica HOM05D006669 ORTHO05D008440 3.3e-30 136.0 96 61.5
AUR62003969 Chenopodium quinoa HOM05D006669 ORTHO05D008440 1.6e-29 133.7 89 62.9
SalBow6G5653 Salvia bowleyana HOM05D006669 ORTHO05D008440 1.6e-29 133.7 93 61.3
Os03g0761700 Oryza sativa ssp. japonica HOM05D006669 ORTHO05D008440 6.2e-29 131.7 94 61.7
HPP92_000758 Vanilla planifolia HOM05D006669 ORTHO05D008440 5.2e-28 128.6 96 57.3
VMungo1215G2631 Vigna mungo HOM05D006669 ORTHO05D008440 1.5e-27 127.1 82 65.9
Lsat_1_v5_gn_3_88261 Lactuca sativa HOM05D006669 ORTHO05D008440 2.2e-26 123.2 84 58.3
MELO3C007610.2 Cucumis melo HOM05D006669 ORTHO05D008440 3.2e-25 119.4 96 54.2
unitig_62.g23421 Utricularia gibba HOM05D006669 ORTHO05D008440 3.2e-25 119.4 94 57.4
Manes.12G112200 Manihot esculenta HOM05D006669 ORTHO05D008440 1.7e-23 113.6 50 96.0
SEGI_19371 Sequoiadendron giganteum HOM05D006669 ORTHO05D008440 1.1e-22 110.9 147 41.5
SEGI_27298 Sequoiadendron giganteum HOM05D006669 ORTHO05D008440 2.1e-21 106.7 110 47.3
CiPaw.02G004600 Carya illinoinensis HOM05D006669 ORTHO05D008440 5.8e-19 98.6 51 78.4
TAR381G0156 Trochodendron aralioides HOM05D006669 ORTHO05D008440 2.9e-18 96.3 76 57.9
Mapoly0045s0047 Marchantia polymorpha HOM05D006669 ORTHO05D008440 7.3e-14 81.6 84 48.8
Nn1g04622 Nelumbo nucifera HOM05D006669 ORTHO05D008440 9.5e-14 81.3 48 72.9
AagrBONN_evm.TU.Sc2ySwM_228.5150 Anthoceros agrestis HOM05D006669 ORTHO05D008440 4.7e-13 79.0 102 38.2
Dinv26898 Davidia involucrata HOM05D006669 ORTHO05D008440 5.2e-12 75.5 52 65.4
Pp3c5_10140 Physcomitrium patens HOM05D006669 ORTHO05D008440 2.2e-10 70.1 98 38.8
Peaxi162Scf01526g00017 Petunia axillaris HOM05D006669 ORTHO05D008440 4.9e-10 68.9 48 60.4


User provided reference genes

Program Settings