Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G039012 Manihot esculenta HOM05D007305 ORTHO05D009886 1.4e-105 386.3 198 100.0
Manes.15G168650 Manihot esculenta HOM05D007305 ORTHO05D009886 2.9e-95 352.1 197 93.4
Manes.15G035050 Manihot esculenta HOM05D007305 ORTHO05D009886 4.0e-89 331.6 190 90.5
Manes.15G058801 Manihot esculenta HOM05D007305 ORTHO05D009886 1.3e-74 283.5 190 79.5
Manes.09G001301 Manihot esculenta HOM05D007305 ORTHO05D009886 4.8e-66 255.0 198 72.2
Manes.02G211261 Manihot esculenta HOM05D007305 ORTHO05D009886 2.7e-53 212.6 129 84.5
Manes.18G104116 Manihot esculenta HOM05D007305 ORTHO05D009886 1.1e-49 200.7 107 91.6
Manes.13G105340 Manihot esculenta HOM05D007305 ORTHO05D009886 5.3e-49 198.4 151 70.2
CANSAT78G2514 Cannabis sativa HOM05D007305 ORTHO05D009886 1.3e-47 193.7 199 56.3
Manes.13G079525 Manihot esculenta HOM05D007305 ORTHO05D009886 8.5e-47 191.0 114 85.1
Manes.16G035125 Manihot esculenta HOM05D007305 ORTHO05D009886 1.5e-43 180.3 123 74.8
Manes.05G187732 Manihot esculenta HOM05D007305 ORTHO05D009886 8.2e-42 174.5 111 80.2
Manes.08G072166 Manihot esculenta HOM05D007305 ORTHO05D009886 3.2e-38 162.5 116 72.4
Sabra07G0082100 Salix brachista HOM05D007305 ORTHO05D009886 5.5e-38 161.8 196 50.5
Sabra17G0125400 Salix brachista HOM05D007305 ORTHO05D009886 5.5e-38 161.8 196 50.5
Manes.18G035550 Manihot esculenta HOM05D007305 ORTHO05D009886 1.6e-37 160.2 110 75.5
Sabra18G0102700 Salix brachista HOM05D007305 ORTHO05D009886 5.1e-36 155.2 199 49.2
Manes.07G072314 Manihot esculenta HOM05D007305 ORTHO05D009886 8.8e-36 154.5 83 95.2
Manes.06G147450 Manihot esculenta HOM05D007305 ORTHO05D009886 1.2e-32 144.1 96 80.2
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 8.8e-28 127.9 172 47.7
Sabra16G0035300 Salix brachista HOM05D007305 ORTHO05D009886 2.0e-27 126.7 172 47.7
Manes.06G030066 Manihot esculenta HOM05D007305 ORTHO05D009886 1.7e-26 123.6 86 77.9
Sabra06G0016700 Salix brachista HOM05D000027 ORTHO05D000066 1.7e-26 123.6 158 48.1
Sabra04G0080000 Salix brachista HOM05D007305 ORTHO05D009886 2.2e-26 123.2 175 47.4
Manes.02G001425 Manihot esculenta HOM05D000002 ORTHO05D000001 3.2e-22 109.4 69 85.5
SHI20378 Sapria himalayana HOM05D000002 ORTHO05D009886 8.0e-21 104.8 197 37.1
SHI14644 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-20 104.4 193 36.3
TWI73G0357 Tripterygium wilfordii HOM05D023524 ORTHO05D009886 8.8e-20 101.3 227 40.5
SHI21600 Sapria himalayana HOM05D000002 ORTHO05D009886 2.8e-18 96.3 178 39.3
Gorai.006G052700 Gossypium raimondii HOM05D056255 ORTHO05D047221 1.1e-17 94.4 188 37.8
Manes.09G019650 Manihot esculenta HOM05D007305 ORTHO05D009886 1.1e-17 94.4 60 81.7
SHI35106 Sapria himalayana HOM05D007305 ORTHO05D009886 2.4e-17 93.2 168 41.1
SHI07334 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-16 89.7 188 38.8
SHI00069 Sapria himalayana HOM05D000002 ORTHO05D009886 1.3e-15 87.4 197 33.5
Manes.13G089260 Manihot esculenta HOM05D007305 ORTHO05D009886 5.0e-15 85.5 60 78.3
SHI15390 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-14 82.8 195 36.9
SHI22311 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-14 82.4 194 35.1
SHI12340 Sapria himalayana HOM05D000002 ORTHO05D009886 5.5e-14 82.0 104 50.0
Sabra11G0081600 Salix brachista HOM05D007305 ORTHO05D009886 2.7e-13 79.7 123 43.9
SHI09975 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-13 79.3 193 34.2
SHI25917 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-13 79.3 193 34.7
SHI06777 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-13 78.6 197 34.0
SHI23673 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-13 78.6 193 33.7
SHI32183 Sapria himalayana HOM05D000002 ORTHO05D000001 8.0e-13 78.2 193 33.7
SHI32097 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-12 77.8 193 33.2
SHI08885 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-12 77.0 192 33.3
SHI14083 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-12 77.0 187 35.8
SHI11625 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-12 76.6 192 32.8
SHI34552 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-12 76.6 195 35.9
SHI12565 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-12 75.9 193 34.7
SHI21519 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-12 75.9 193 33.7
SHI02940 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-12 75.5 193 36.3
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-12 75.5 193 34.2
SHI14291 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-12 75.1 193 31.6
SHI27632 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-12 75.1 193 32.6
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-12 75.1 194 34.5
Manes.12G129950 Manihot esculenta HOM05D000002 ORTHO05D000001 1.5e-11 73.9 204 31.4
Sed0002096 Sechium edule HOM05D007305 ORTHO05D009886 2.0e-11 73.6 110 40.0
SHI22147 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-11 73.2 193 31.6
SHI23844 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-11 73.2 192 32.3
SHI14921 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-11 72.8 197 34.5
SHI01799 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-11 72.4 193 31.6
SHI32977 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-11 72.4 195 32.8
SHI20242 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-11 71.6 192 32.8
SHI32732 Sapria himalayana HOM05D000002 ORTHO05D000001 9.8e-11 71.2 194 31.4
TWI79G0335 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 9.8e-11 71.2 214 28.5
SHI03307 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-10 70.9 195 32.3
SHI16752 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-10 70.9 194 34.0
Manes.13G009802 Manihot esculenta HOM05D000002 ORTHO05D000001 1.7e-10 70.5 209 30.6
SHI07176 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-10 70.5 193 33.2
SHI11377 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-10 70.5 194 32.0
SHI40520 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-10 70.5 194 33.0
Sopen11g023560 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-10 70.5 62 62.9
SHI14540 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-10 70.1 193 33.2
SHI24178 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-10 70.1 193 31.6
SHI29361 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-10 70.1 192 33.3
SHI24173 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-10 68.9 192 31.2
SHI09499 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-10 68.6 201 32.3
SHI27844 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-10 68.6 193 34.7
SHI15625 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-10 68.2 194 33.0
SHI27215 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-10 68.2 193 31.6
TWI14G0936 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 8.3e-10 68.2 215 29.3
TWI74G0014 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 8.3e-10 68.2 214 28.5
SHI06859 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-09 67.8 189 30.7
SHI11084 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-09 67.8 193 32.1
SHI25695 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-09 67.8 196 34.2
SHI49787 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-09 67.8 193 32.1
SHI50423 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-09 67.8 192 35.4
SHI03781 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-09 67.4 195 31.3
SHI15483 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-09 67.4 193 31.1
SHI11086 Sapria himalayana HOM05D007305 ORTHO05D009886 1.8e-09 67.0 187 36.4
Cpa.g.sc37.32 Carica papaya HOM05D007305 ORTHO05D009886 3.1e-09 66.2 163 34.4
SHI26413 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-09 66.2 192 32.3
SHI17232 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-09 65.9 193 31.6
SHI23873 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-09 65.9 193 33.2
SHI10616 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-09 65.5 194 32.5
SHI27053 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-09 65.5 193 31.6
SHI36811 Sapria himalayana HOM05D007305 ORTHO05D009886 7.0e-09 65.1 93 40.9
SHI36830 Sapria himalayana HOM05D007305 ORTHO05D009886 7.0e-09 65.1 93 40.9
CAN.G710.25 Capsicum annuum HOM05D000011 ORTHO05D007164 9.2e-09 64.7 192 29.2
SHI10701 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-08 63.9 193 30.6
SHI26358 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-08 63.9 193 32.1
CSS0038420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-08 63.5 219 32.4
SHI21345 Sapria himalayana HOM05D000002 ORTHO05D009886 2.0e-08 63.5 193 31.6
SHI01660 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-08 63.2 177 32.2
CSS0019150 Camellia sinensis var. sinensis HOM05D000936 ORTHO05D005107 3.5e-08 62.8 203 30.5
SHI17479 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-08 62.8 169 33.7
SHI23173 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-08 62.4 192 30.7
Manes.16G056009 Manihot esculenta HOM05D000002 ORTHO05D000001 5.9e-08 62.0 207 29.0
SHI05330 Sapria himalayana HOM05D001596 ORTHO05D000001 5.9e-08 62.0 193 31.6
CSS0002432 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.7e-08 61.6 232 30.6
SHI07494 Sapria himalayana HOM05D000002 ORTHO05D000001 7.7e-08 61.6 192 31.2
Cc10_g11590 Coffea canephora HOM05D002761 ORTHO05D003351 1.0e-07 61.2 56 64.3
SHI14497 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-07 61.2 192 31.2
SHI29161 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-07 60.8 198 28.8
SHI32815 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-07 60.8 193 32.1
Gohir.D09G054350 Gossypium hirsutum HOM05D056255 ORTHO05D047221 1.7e-07 60.5 122 37.7
SHI05993 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-07 60.5 192 31.8
SHI07508 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-07 60.5 192 30.7
SHI04188 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-07 59.7 201 28.4
SHI49078 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-07 59.7 190 32.1
SHI14439 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-07 59.3 188 30.9
SHI30603 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-07 59.3 193 30.6
SHI41210 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-07 59.3 191 31.4
SHI30441 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-07 58.9 193 31.6
SHI33187 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-07 58.9 193 28.5
SHI03814 Sapria himalayana HOM05D000002 ORTHO05D000001 6.6e-07 58.5 193 29.5
SHI22286 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-07 58.2 196 31.6
SHI23559 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-07 58.2 194 33.5
Ah.07g205280 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.1e-06 57.8 207 25.1
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 1.1e-06 57.8 214 27.1
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 1.1e-06 57.8 214 27.1
SHI09366 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-06 57.0 197 29.9
SHI31578 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-06 56.2 83 44.6
SHI34296 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-06 55.8 193 30.1
SHI00649 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-06 55.5 188 33.0
SHI12381 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-06 55.5 51 54.9
Oeu056823.1 Olea europaea HOM05D023524 ORTHO05D009886 7.3e-06 55.1 113 32.7
SHI11777 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-06 55.1 146 34.2
SHI29753 Sapria himalayana HOM05D001030 ORTHO05D000001 7.3e-06 55.1 174 31.6
SHI03492 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-06 54.7 197 32.0
SHI16988 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-06 54.7 58 56.9
SHI21665 Sapria himalayana HOM05D000105 ORTHO05D000023 9.5e-06 54.7 82 48.8


User provided reference genes

Program Settings