Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 1.7e-177 625.9 327 100.0
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 4.4e-117 425.2 288 79.2
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 4.6e-114 415.2 288 78.1
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 1.3e-113 413.7 287 76.3
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 1.9e-112 409.8 288 75.3
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 5.6e-112 408.3 287 74.9
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 7.3e-112 407.9 287 75.6
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 9.5e-112 407.5 287 74.6
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 2.1e-111 406.4 287 76.0
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 4.7e-111 405.2 290 75.2
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 2.2e-108 396.4 287 73.9
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 8.3e-108 394.4 288 72.9
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 2.4e-107 392.9 287 73.9
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 7.1e-107 391.3 283 73.1
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 1.6e-106 390.2 288 74.7
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 1.6e-106 390.2 292 72.9
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 2.7e-106 389.4 287 73.2
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 6.0e-106 388.3 287 72.8
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.7e-105 386.7 298 71.1
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 1.5e-104 383.6 291 70.1
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 1.9e-104 383.3 289 71.6
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 4.7e-103 378.6 287 70.0
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 4.7e-103 378.6 288 69.8
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 8.1e-103 377.9 286 69.6
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 1.4e-102 377.1 274 73.7
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 1.8e-102 376.7 288 71.2
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 3.1e-102 375.9 286 71.7
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.2e-101 374.0 287 71.8
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 2.6e-101 372.9 284 70.1
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 5.8e-101 371.7 289 65.7
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 6.4e-100 368.2 288 70.8
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 1.1e-99 367.5 287 68.3
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 1.4e-99 367.1 288 69.1
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 2.4e-99 366.3 274 71.2
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 7.1e-99 364.8 288 67.4
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 2.1e-98 363.2 287 67.6
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 2.7e-98 362.8 287 67.6
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 3.5e-98 362.5 289 67.8
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 3.9e-97 359.0 288 67.4
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 3.9e-97 359.0 290 68.6
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 5.1e-97 358.6 295 68.8
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 5.1e-97 358.6 287 66.6
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 6.6e-97 358.2 287 66.9
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 6.6e-97 358.2 287 66.9
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 1.9e-96 356.7 287 64.5
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 4.3e-96 355.5 287 66.2
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 4.3e-96 355.5 288 67.0
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 5.6e-96 355.1 287 65.5
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 2.1e-95 353.2 283 65.0
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 6.2e-95 351.7 288 64.2
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 3.1e-94 349.4 288 67.0
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 4.0e-94 349.0 290 69.0
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 5.2e-94 348.6 284 65.1
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 1.5e-93 347.1 288 68.8
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 2.6e-93 346.3 288 68.4
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 2.6e-93 346.3 287 66.2
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 2.6e-93 346.3 274 68.2
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 5.8e-93 345.1 289 67.8
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 7.6e-93 344.7 289 68.5
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 7.6e-93 344.7 288 65.6
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 9.9e-93 344.4 288 65.6
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 1.3e-92 344.0 288 67.7
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 3.8e-92 342.4 298 64.1
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 8.4e-92 341.3 288 64.9
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 1.1e-91 340.9 327 59.0
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 3.2e-91 339.3 287 65.2
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 4.2e-91 339.0 272 69.1
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 5.4e-91 338.6 292 66.1
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 5.4e-91 338.6 284 64.4
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 7.1e-91 338.2 289 66.4
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 7.1e-91 338.2 289 66.4
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 1.2e-90 337.4 288 66.7
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 1.6e-90 337.0 290 67.9
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 2.7e-90 336.3 283 66.4
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 2.7e-90 336.3 360 58.9
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 2.7e-90 336.3 290 67.6
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 2.7e-90 336.3 290 63.1
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 7.8e-90 334.7 290 67.2
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 1.3e-89 334.0 290 64.1
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 1.7e-89 333.6 226 75.2
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 1.3e-87 327.4 331 58.3
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 4.8e-87 325.5 287 61.3
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 1.5e-85 320.5 289 60.2
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 5.8e-85 318.5 310 57.4
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 6.4e-84 315.1 237 71.7
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 8.4e-84 314.7 293 59.0
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 2.7e-82 309.7 323 56.0
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 1.9e-80 303.5 316 54.7
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 2.8e-79 299.7 288 60.4
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 1.5e-77 293.9 223 68.2
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 2.6e-77 293.1 262 63.0
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 1.3e-76 290.8 290 57.6
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 2.9e-76 289.7 222 69.4
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 1.2e-74 284.3 289 55.7
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 5.6e-72 275.4 248 62.1
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 5.8e-69 265.4 296 53.7
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 7.6e-69 265.0 212 65.6
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 1.9e-67 260.4 203 71.9
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 3.7e-63 246.1 203 61.6
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 6.2e-63 245.4 156 82.1
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 8.4e-60 235.0 207 58.0
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 3.2e-59 233.0 227 62.6
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 7.1e-59 231.9 227 62.6
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 2.7e-58 229.9 221 61.1
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 2.3e-57 226.9 173 75.1
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 9.7e-56 221.5 227 55.5
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 1.1e-54 218.0 211 53.1
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 5.3e-46 189.1 213 47.4
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 1.5e-45 187.6 151 66.2
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 1.7e-44 184.1 205 59.0
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 2.9e-44 183.3 174 55.2
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 6.1e-42 175.6 230 47.4
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 7.0e-30 135.6 209 41.1
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 5.0e-28 129.4 218 35.8
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 2.9e-20 103.6 62 77.4
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 1.5e-19 101.3 186 38.2
CBR_g50304 Chara braunii HOM05D020303 ORTHO05D021299 2.4e-14 84.0 155 33.5
MD13G1066100 Malus domestica HOM05D002318 ORTHO05D008744 3.3e-11 73.6 76 51.3
Lsat_1_v5_gn_5_151580 Lactuca sativa HOM05D002318 ORTHO05D008744 8.0e-10 68.9 56 66.1
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 1.8e-09 67.8 45 66.7
Cfa025736 Carpinus fangiana HOM05D020303 ORTHO05D021299 5.4e-06 56.2 70 38.6


User provided reference genes

Program Settings