Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 1.9e-248 862.1 442 100.0
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 6.3e-175 617.8 445 72.8
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 2.3e-169 599.4 399 75.4
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 4.7e-162 575.1 435 68.7
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 1.3e-159 567.0 441 68.9
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 1.8e-158 563.1 437 68.0
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 4.1e-158 562.0 430 68.1
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 2.6e-157 559.3 443 67.3
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 1.0e-156 557.4 412 69.9
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 1.9e-155 553.1 446 65.2
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 9.4e-155 550.8 440 64.8
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 1.0e-153 547.4 446 64.3
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 5.2e-153 545.0 440 66.4
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 4.4e-152 542.0 416 68.8
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 7.4e-152 541.2 434 66.6
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 2.2e-151 539.7 450 65.3
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 1.8e-150 536.6 437 67.3
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 7.0e-150 534.6 440 65.0
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 9.1e-150 534.3 426 66.2
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.7e-148 530.0 426 65.7
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 2.9e-148 529.3 424 66.0
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 8.5e-148 527.7 426 65.7
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 1.5e-147 526.9 451 63.0
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 5.5e-147 525.0 428 64.7
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 1.2e-146 523.9 438 63.7
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 1.6e-146 523.5 451 63.2
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 3.6e-146 522.3 439 62.4
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 4.7e-146 521.9 451 62.1
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 4.7e-146 521.9 455 63.1
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 8.0e-146 521.2 430 65.3
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.3e-145 519.6 426 64.3
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 5.7e-144 515.0 448 64.1
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.1e-142 510.8 409 64.3
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 3.1e-142 509.2 434 62.9
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 4.2e-139 498.8 409 65.0
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 1.2e-138 497.3 381 66.7
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 4.7e-138 495.4 415 63.1
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 8.0e-138 494.6 430 60.9
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 1.8e-137 493.4 435 60.0
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 4.0e-137 492.3 403 62.5
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 2.0e-136 490.0 404 62.1
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 3.4e-136 489.2 433 60.5
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 3.4e-136 489.2 441 59.9
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 4.4e-136 488.8 404 61.9
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 4.4e-136 488.8 433 59.8
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 9.8e-136 487.6 401 63.3
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 9.8e-136 487.6 434 59.0
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 2.8e-135 486.1 416 61.1
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 4.8e-135 485.3 422 60.4
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 5.4e-134 481.9 415 60.0
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 1.2e-133 480.7 408 61.8
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 1.2e-133 480.7 413 61.0
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 2.0e-133 479.9 415 60.2
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 3.8e-132 475.7 414 59.7
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 9.5e-131 471.1 427 59.5
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 2.3e-129 466.5 409 59.7
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 3.7e-127 459.1 434 56.0
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 2.4e-126 456.4 426 57.5
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 5.4e-126 455.3 434 55.8
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 3.5e-125 452.6 347 65.4
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 1.1e-123 447.6 362 65.7
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 1.5e-123 447.2 438 53.4
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 4.3e-123 445.7 394 60.9
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 5.6e-123 445.3 437 54.2
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 5.6e-123 445.3 437 54.2
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 2.1e-122 443.4 436 53.0
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 3.6e-122 442.6 435 53.6
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 3.6e-122 442.6 437 53.8
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 4.7e-122 442.2 437 53.5
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 2.3e-121 439.9 406 55.7
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 3.1e-121 439.5 430 53.7
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 3.4e-120 436.0 429 54.1
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 5.8e-120 435.3 443 53.7
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 2.9e-119 433.0 405 55.1
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 3.7e-119 432.6 379 62.5
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 2.8e-114 416.4 343 63.3
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 1.2e-104 384.4 335 60.3
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 2.7e-101 373.2 331 58.9
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 3.6e-98 362.8 379 51.7
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 8.1e-98 361.7 306 61.8
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 5.2e-97 359.0 423 47.8
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 8.7e-92 341.7 409 46.0
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 3.3e-91 339.7 335 56.7
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 6.0e-85 318.9 269 62.1
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 2.3e-84 317.0 395 44.8
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 3.3e-83 313.2 408 41.4
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 3.6e-82 309.7 377 45.1
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 4.6e-77 292.7 431 40.8
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.1e-73 281.6 252 59.9
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 1.7e-71 274.2 301 49.8
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 9.3e-70 268.5 299 49.8
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 5.3e-65 252.7 405 38.3
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 7.4e-59 232.3 602 30.4
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 4.8e-58 229.6 390 38.7
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 3.9e-52 209.9 237 52.3
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 1.1e-43 181.8 247 43.3
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 5.9e-40 169.5 116 70.7
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 3.2e-38 163.7 128 63.3
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 1.8e-33 147.9 134 57.5
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 1.3e-26 125.2 132 52.3
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 1.2e-24 118.6 365 28.8
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 7.7e-24 115.9 84 71.4
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 1.3e-23 115.2 112 58.9
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 1.8e-20 104.8 78 64.1
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 2.8e-18 97.4 82 62.2
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 5.4e-17 93.2 84 59.5
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 3.5e-16 90.5 244 30.7
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 4.5e-16 90.1 65 73.8
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 6.6e-15 86.3 79 51.9
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 8.9e-12 75.9 81 49.4
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 1.1e-09 68.9 37 91.9
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 1.6e-08 65.1 62 54.8
CAN.G46.28 Capsicum annuum HOM05D001997 ORTHO05D004620 1.1e-06 58.9 41 68.3
CAN.G1014.20 Capsicum annuum HOM05D007058 ORTHO05D021411 3.3e-06 57.4 41 70.7
CAN.G1376.1 Capsicum annuum HOM05D004980 ORTHO05D021411 5.6e-06 56.6 137 32.8


User provided reference genes

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