Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 8.8e-148 526.9 269 100.0
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 3.2e-89 332.4 273 67.8
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 1.2e-88 330.5 266 67.3
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 1.5e-86 323.6 271 64.2
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 1.6e-85 320.1 265 65.3
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 2.6e-83 312.8 267 65.2
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 3.4e-83 312.4 261 64.0
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 4.5e-83 312.0 267 64.8
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 1.3e-82 310.5 249 64.3
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 1.3e-82 310.5 249 64.3
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 1.3e-82 310.5 213 73.7
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 1.7e-82 310.1 270 64.4
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 1.7e-82 310.1 263 62.7
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 2.9e-82 309.3 267 64.8
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 3.8e-82 308.9 184 80.4
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 8.4e-82 307.8 319 57.4
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 1.1e-81 307.4 184 79.9
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 1.1e-81 307.4 190 82.1
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 1.4e-81 307.0 212 72.6
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 3.2e-81 305.8 212 72.2
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 3.2e-81 305.8 191 78.5
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 4.2e-81 305.4 201 72.6
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 4.2e-81 305.4 213 72.3
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 4.2e-81 305.4 231 68.4
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 4.2e-81 305.4 264 63.3
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 4.2e-81 305.4 266 64.3
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 5.5e-81 305.1 198 75.8
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 5.5e-81 305.1 267 64.4
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 1.2e-80 303.9 193 78.8
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 1.6e-80 303.5 231 66.7
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 2.1e-80 303.1 196 75.5
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 2.7e-80 302.8 258 63.2
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 3.5e-80 302.4 246 62.6
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 6.0e-80 301.6 224 67.9
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 6.0e-80 301.6 268 62.7
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 7.9e-80 301.2 181 78.5
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 7.9e-80 301.2 213 70.9
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 1.0e-79 300.8 267 62.9
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 1.3e-79 300.4 266 62.0
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 1.3e-79 300.4 265 58.9
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 1.3e-79 300.4 267 61.8
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 1.8e-79 300.1 250 62.0
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 2.3e-79 299.7 264 62.9
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 2.3e-79 299.7 191 75.4
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.0e-79 299.3 265 63.0
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 3.9e-79 298.9 268 60.8
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 3.9e-79 298.9 248 64.5
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 5.1e-79 298.5 183 77.6
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 5.1e-79 298.5 264 60.2
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 5.1e-79 298.5 265 63.0
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 6.7e-79 298.1 273 61.5
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 6.7e-79 298.1 196 74.5
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 8.7e-79 297.7 272 61.8
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 8.7e-79 297.7 265 62.6
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 1.1e-78 297.4 268 62.7
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 1.5e-78 297.0 265 59.6
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 1.5e-78 297.0 266 60.2
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 1.5e-78 297.0 266 61.7
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.9e-78 296.6 265 62.6
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.9e-78 296.6 265 62.6
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 1.9e-78 296.6 194 76.8
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 2.5e-78 296.2 270 60.4
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 3.3e-78 295.8 268 60.4
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 4.3e-78 295.4 271 62.0
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 5.7e-78 295.0 222 67.6
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 1.3e-77 293.9 270 58.5
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 1.3e-77 293.9 268 61.6
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 2.1e-77 293.1 183 79.8
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 2.1e-77 293.1 181 77.3
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 2.8e-77 292.7 184 75.5
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 3.7e-77 292.4 267 60.3
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 3.7e-77 292.4 269 58.4
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 4.8e-77 292.0 191 76.4
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 6.3e-77 291.6 254 59.1
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 6.3e-77 291.6 273 59.3
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 1.8e-76 290.0 264 60.2
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 1.8e-76 290.0 267 59.9
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 2.4e-76 289.7 207 68.6
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 2.4e-76 289.7 181 78.5
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 3.1e-76 289.3 271 60.9
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 1.2e-75 287.3 189 74.1
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 2.0e-75 286.6 275 58.5
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 3.4e-75 285.8 272 59.9
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 4.5e-75 285.4 269 59.5
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 4.5e-75 285.4 194 70.1
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 5.9e-75 285.0 271 58.7
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 1.0e-74 284.3 202 71.3
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 1.7e-74 283.5 255 60.0
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 2.2e-74 283.1 266 59.4
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 2.9e-74 282.7 269 60.2
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 5.0e-74 282.0 244 62.3
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 1.4e-73 280.4 259 59.1
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 9.3e-73 277.7 233 59.7
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 9.3e-73 277.7 243 60.5
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 8.7e-71 271.2 201 64.7
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 1.5e-70 270.4 249 56.2
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 3.3e-70 269.2 265 57.7
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.6e-69 266.9 313 52.4
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 6.3e-69 265.0 208 63.9
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 2.4e-68 263.1 204 65.2
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 9.1e-68 261.2 212 64.2
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 2.0e-67 260.0 198 63.1
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 4.5e-67 258.8 321 50.8
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.3e-66 257.3 220 59.5
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 4.2e-65 252.3 220 58.6
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 1.2e-64 250.8 272 54.4
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 2.7e-64 249.6 182 68.1
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 7.9e-64 248.1 272 55.5
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 1.8e-63 246.9 197 62.9
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 2.0e-62 243.4 263 54.8
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 2.0e-59 233.4 201 57.7
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 7.0e-52 208.4 119 84.9
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 1.0e-42 177.9 331 39.9
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 2.2e-37 160.2 181 49.7
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 1.8e-31 140.6 78 83.3
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 2.0e-27 127.1 105 59.0
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 1.0e-26 124.8 170 44.7
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 4.0e-23 112.8 149 46.3
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 6.8e-23 112.1 149 45.6
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 6.4e-21 105.5 94 56.4


User provided reference genes

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