Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.9807 Avicennia marina HOM05D000958 ORTHO05D000786 9.2e-95 350.1 167 100.0
Dinv27209 Davidia involucrata HOM05D000958 ORTHO05D011934 2.0e-09 66.6 69 43.5
Dinv27211 Davidia involucrata HOM05D000958 ORTHO05D011934 5.9e-09 65.1 91 35.2
Zm00001eb224730 Zea mays HOM05D000958 ORTHO05D000786 1.7e-08 63.5 149 28.2
Sed0014178 Sechium edule HOM05D000958 ORTHO05D000786 2.2e-08 63.2 108 36.1
CsaV3_4G032200 Cucumis sativus L. HOM05D000958 ORTHO05D000786 3.8e-08 62.4 115 34.8
Sed0015507 Sechium edule HOM05D000958 ORTHO05D000786 3.8e-08 62.4 136 31.6
MSTRG.18040 Avicennia marina HOM05D000958 ORTHO05D011934 6.5e-08 61.6 87 34.5
MELO3C026392.2 Cucumis melo HOM05D000958 ORTHO05D000786 6.5e-08 61.6 76 40.8
DCAR_017710 Daucus carota HOM05D000958 ORTHO05D000786 6.5e-08 61.6 117 31.6
PSO339G4144 Papaver somniferum HOM05D000958 ORTHO05D000786 8.5e-08 61.2 103 33.0
unitig_749.g14270 Utricularia gibba HOM05D000958 ORTHO05D000786 1.5e-07 60.5 81 37.0
Ah.15g092260 Amaranthus hybridus HOM05D000958 ORTHO05D000786 1.9e-07 60.1 74 37.8
GSVIVG01020801001 Vitis vinifera HOM05D000958 ORTHO05D000786 1.9e-07 60.1 106 33.0
CDE08G0303 Ceratophyllum demersum HOM05D000958 ORTHO05D000786 2.5e-07 59.7 93 33.3
Glyma.13G005300 Glycine max HOM05D000958 ORTHO05D000786 2.5e-07 59.7 97 34.0
CARHR080850 Cardamine hirsuta HOM05D000958 ORTHO05D000786 4.2e-07 58.9 82 35.4
Atru.chr3.3637 Acer truncatum HOM05D000958 ORTHO05D000786 5.5e-07 58.5 88 36.4
Aa31LG5G16830 Aethionema arabicum HOM05D000958 ORTHO05D000786 5.5e-07 58.5 89 34.8
vmacro03195 Vaccinium macrocarpon HOM05D000958 ORTHO05D000786 5.5e-07 58.5 84 36.9
Actinidia40031 Actinidia chinensis HOM05D000958 ORTHO05D000786 7.2e-07 58.2 68 41.2
Aqoxy4G00008 Aquilegia oxysepala HOM05D000958 ORTHO05D000786 7.2e-07 58.2 92 31.5
CANSAT64G0153 Cannabis sativa HOM05D000958 ORTHO05D000786 7.2e-07 58.2 94 35.1
Cc01_g11190 Coffea canephora HOM05D000958 ORTHO05D000786 7.2e-07 58.2 89 36.0
PSO384G0883 Papaver somniferum HOM05D000958 ORTHO05D000786 7.2e-07 58.2 78 38.5
Actinidia23415 Actinidia chinensis HOM05D000958 ORTHO05D011934 9.4e-07 57.8 87 35.6
MSTRG.3443 Avicennia marina HOM05D000958 ORTHO05D000786 9.4e-07 57.8 107 32.7
CANSAT78G1229 Cannabis sativa HOM05D000958 ORTHO05D000786 9.4e-07 57.8 90 35.6
Solyc09g007680.4 Solanum lycopersicum HOM05D000958 ORTHO05D000786 9.4e-07 57.8 82 36.6
TWI74G1408 Tripterygium wilfordii HOM05D000958 ORTHO05D000786 9.4e-07 57.8 112 27.7
Migut.G00733 Erythranthe guttata HOM05D000958 ORTHO05D011934 1.2e-06 57.4 71 36.6
HPP92_002161 Vanilla planifolia HOM05D000958 ORTHO05D000786 1.2e-06 57.4 64 40.6
BcaB04g21328 Brassica carinata HOM05D000958 ORTHO05D000786 1.6e-06 57.0 92 31.5
ECA248G2166 Erigeron canadensis HOM05D004008 ORTHO05D005383 1.6e-06 57.0 78 35.9
Lalb_Chr24g0394591 Lupinus albus HOM05D000958 ORTHO05D000786 1.6e-06 57.0 146 27.4
CAN.G888.11 Capsicum annuum HOM05D000958 ORTHO05D000786 2.1e-06 56.6 102 33.3
Haze_01040 Corylus avellana HOM05D000958 ORTHO05D000786 2.1e-06 56.6 91 30.8
DCAR_009829 Daucus carota HOM05D000958 ORTHO05D000786 2.1e-06 56.6 80 35.0
ECA246G3184 Erigeron canadensis HOM05D000351 ORTHO05D000250 2.1e-06 56.6 87 33.3
Thhalv10020737m.g Eutrema salsugineum HOM05D000958 ORTHO05D000786 2.1e-06 56.6 81 33.3
Lj6g0021547 Lotus japonicus HOM05D000958 ORTHO05D000786 2.1e-06 56.6 92 33.7
PGSC0003DMG400001776 Solanum tuberosum HOM05D000958 ORTHO05D000786 2.1e-06 56.6 120 30.8
CANSAT54G2392 Cannabis sativa HOM05D000958 ORTHO05D000786 3.6e-06 55.8 64 39.1
Cfa015510 Carpinus fangiana HOM05D000958 ORTHO05D000786 3.6e-06 55.8 91 30.8
AUR62040361 Chenopodium quinoa HOM05D000958 ORTHO05D000786 3.6e-06 55.8 73 38.4
AUR62043145 Chenopodium quinoa HOM05D000958 ORTHO05D000786 3.6e-06 55.8 73 38.4
HanXRQChr17g0537201 Helianthus annuus HOM05D000958 ORTHO05D000786 3.6e-06 55.8 93 32.3
Migut.J00554 Erythranthe guttata HOM05D000958 ORTHO05D000786 4.7e-06 55.5 64 40.6
Sopen09g002570 Solanum pennellii HOM05D000958 ORTHO05D000786 4.7e-06 55.5 82 36.6
ATR1098G056 Amborella trichopoda HOM05D000958 ORTHO05D000786 6.1e-06 55.1 92 31.5
EL10Ac7g16539 Beta vulgaris HOM05D000958 ORTHO05D000786 6.1e-06 55.1 98 29.6
Eucgr.K03240 Eucalyptus grandis HOM05D000958 ORTHO05D000786 6.1e-06 55.1 64 40.6
CiPaw.09G177200 Carya illinoinensis HOM05D000958 ORTHO05D000786 8.0e-06 54.7 73 34.2
Ciclev10011512m.g Citrus clementina HOM05D000958 ORTHO05D000786 8.0e-06 54.7 64 40.6
ECA238G3013 Erigeron canadensis HOM05D000958 ORTHO05D000786 8.0e-06 54.7 81 34.6
HanXRQChr14g0452901 Helianthus annuus HOM05D000958 ORTHO05D000786 8.0e-06 54.7 69 37.7
Nitab4.5_0001843g0160 Nicotiana tabacum HOM05D000958 ORTHO05D000786 8.0e-06 54.7 64 37.5
Nitab4.5_0006724g0030 Nicotiana tabacum HOM05D000958 ORTHO05D000786 8.0e-06 54.7 64 37.5
Phvul.006G160100 Phaseolus vulgaris HOM05D000958 ORTHO05D000786 8.0e-06 54.7 64 40.6
SalBow3G2824 Salvia bowleyana HOM05D000958 ORTHO05D000786 8.0e-06 54.7 135 29.6


User provided reference genes

Program Settings