Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 2.0e-107 392.5 208 100.0
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 1.4e-68 263.5 221 69.7
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 2.5e-57 226.1 223 62.3
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 2.3e-55 219.5 221 59.7
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 1.7e-53 213.4 200 61.0
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 7.8e-51 204.5 226 60.6
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 3.1e-47 192.6 221 54.8
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 9.8e-46 187.6 217 54.8
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 2.9e-45 186.0 217 54.8
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 1.1e-44 184.1 223 53.8
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 9.2e-44 181.0 214 54.2
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 4.6e-43 178.7 216 51.9
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 6.6e-42 174.9 214 53.7
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 1.5e-41 173.7 221 52.9
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 7.3e-41 171.4 218 52.8
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 5.2e-39 165.2 213 51.6
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 1.2e-38 164.1 217 50.7
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 5.8e-38 161.8 213 49.8
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 7.5e-38 161.4 216 49.1
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 2.9e-37 159.5 224 51.8
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 2.9e-37 159.5 216 52.8
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 3.7e-37 159.1 214 50.5
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 8.3e-37 157.9 223 50.2
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 4.1e-36 155.6 215 50.2
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 5.4e-36 155.2 211 48.8
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 7.1e-36 154.8 208 50.5
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 1.6e-35 153.7 213 46.5
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 2.1e-35 153.3 215 51.2
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 1.3e-34 150.6 213 46.0
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 3.0e-34 149.4 215 50.7
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 3.0e-34 149.4 215 48.4
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 6.6e-34 148.3 216 47.2
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 1.1e-33 147.5 215 48.4
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 1.5e-33 147.1 182 54.4
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 3.3e-33 146.0 209 45.0
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 5.6e-33 145.2 201 48.3
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 5.6e-33 145.2 213 48.4
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 7.3e-33 144.8 215 47.9
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 1.2e-32 144.1 212 46.2
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.6e-32 143.7 192 52.1
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 1.6e-32 143.7 215 47.4
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 3.6e-32 142.5 215 45.6
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 8.1e-32 141.4 210 45.7
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 1.1e-31 141.0 194 47.4
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 1.1e-31 141.0 217 45.2
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 2.4e-31 139.8 193 45.6
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 3.1e-31 139.4 214 46.3
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 4.0e-31 139.0 221 47.1
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 4.0e-31 139.0 211 46.4
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 8.9e-31 137.9 199 47.7
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.2e-30 137.5 199 47.7
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 1.2e-30 137.5 199 47.7
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.5e-30 137.1 203 48.8
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 2.6e-30 136.3 219 47.0
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 1.7e-29 133.7 207 44.0
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.7e-29 133.7 219 46.1
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 1.7e-29 133.7 196 49.0
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.7e-29 133.7 193 49.2
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 2.2e-29 133.3 213 43.7
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 2.9e-29 132.9 212 44.3
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 3.8e-29 132.5 209 45.9
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 6.4e-29 131.7 208 44.2
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 8.4e-29 131.3 223 43.5
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 1.4e-28 130.6 202 49.0
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.9e-28 130.2 193 48.2
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 2.4e-28 129.8 187 46.5
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 7.1e-28 128.3 190 47.9
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 7.1e-28 128.3 210 45.7
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 9.2e-28 127.9 203 45.8
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 9.2e-28 127.9 230 46.1
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.6e-27 127.1 197 47.2
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 2.7e-27 126.3 206 44.7
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 4.6e-27 125.6 195 47.2
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 6.0e-27 125.2 191 46.1
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 7.8e-27 124.8 197 46.7
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 1.0e-26 124.4 196 45.9
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 2.3e-26 123.2 222 45.5
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 2.3e-26 123.2 212 43.4
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 5.1e-26 122.1 187 43.3
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 5.1e-26 122.1 187 43.3
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 6.6e-26 121.7 185 45.9
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 8.7e-26 121.3 215 41.9
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 8.7e-26 121.3 220 47.3
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 1.1e-25 120.9 185 50.3
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 4.3e-25 119.0 175 50.3
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 7.3e-25 118.2 203 43.3
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 1.2e-24 117.5 152 48.7
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 1.2e-24 117.5 209 41.6
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 6.2e-24 115.2 216 39.8
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 3.1e-23 112.8 208 41.3
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 3.1e-23 112.8 200 44.0
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 5.3e-23 112.1 211 41.2
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 9.0e-23 111.3 198 40.9
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 1.5e-22 110.5 216 44.0
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 2.9e-21 106.3 193 39.4
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 3.8e-21 105.9 221 37.1
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 4.2e-20 102.4 188 42.0
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 9.3e-20 101.3 226 38.9
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 9.3e-20 101.3 196 39.8
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 1.2e-19 100.9 224 39.7
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 1.2e-19 100.9 188 42.0
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 1.6e-19 100.5 197 41.6
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 2.1e-19 100.1 215 40.9
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 1.0e-18 97.8 188 41.0
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 1.3e-18 97.4 211 39.3
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 1.7e-18 97.1 244 38.1
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 3.0e-18 96.3 187 39.6
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 3.0e-18 96.3 187 39.6
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 6.6e-18 95.1 190 40.0
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 6.6e-18 95.1 190 40.0
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 6.6e-18 95.1 159 42.1
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 1.5e-17 94.0 202 39.1
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 8.1e-16 88.2 202 39.6
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 8.1e-16 88.2 121 46.3
AUR62036861 Chenopodium quinoa HOM05D005571 ORTHO05D006919 4.9e-13 79.0 210 33.3
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 1.4e-12 77.4 184 35.3
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 3.2e-12 76.3 170 34.7
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 3.2e-12 76.3 170 34.7
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 3.2e-12 76.3 170 34.7
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 4.2e-12 75.9 109 48.6
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 6.0e-11 72.0 204 33.3
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 3.9e-10 69.3 79 48.1
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 3.9e-10 69.3 177 32.2
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 1.6e-08 63.9 129 41.1
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 1.6e-08 63.9 129 41.1
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 3.7e-08 62.8 128 39.8
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 3.7e-08 62.8 128 39.8
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 3.7e-08 62.8 135 39.3
HPP92_021048 Vanilla planifolia HOM05D005571 ORTHO05D006919 8.1e-08 61.6 159 37.1
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 6.9e-07 58.5 152 35.5
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 6.9e-07 58.5 78 44.9
ECA238G3056 Erigeron canadensis HOM05D002204 ORTHO05D002875 1.5e-06 57.4 112 41.1


User provided reference genes

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