Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 6.5e-128 460.7 223 100.0
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 4.5e-105 384.8 224 84.8
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 9.4e-103 377.1 223 80.3
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 9.4e-103 377.1 223 80.3
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 1.2e-102 376.7 223 81.2
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 9.7e-100 367.1 224 80.4
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 1.3e-99 366.7 228 78.5
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.6e-97 359.0 224 76.8
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.6e-97 359.0 224 76.8
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 7.7e-97 357.5 224 76.8
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 7.7e-97 357.5 224 76.8
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 1.3e-96 356.7 224 76.3
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 1.3e-96 356.7 224 76.3
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 3.8e-96 355.1 259 69.9
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 2.5e-95 352.4 232 75.0
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 4.2e-95 351.7 229 75.5
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 9.4e-95 350.5 228 75.0
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 3.6e-94 348.6 225 74.7
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 3.6e-94 348.6 226 74.8
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 4.7e-94 348.2 231 74.5
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 6.1e-94 347.8 224 73.7
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 1.0e-93 347.1 228 74.1
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 1.0e-93 347.1 230 74.3
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 1.4e-93 346.7 226 72.6
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.8e-93 346.3 223 76.7
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 2.3e-93 345.9 224 74.1
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 3.0e-93 345.5 230 73.9
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 6.7e-93 344.4 230 73.9
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 1.1e-92 343.6 226 75.2
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 1.5e-92 343.2 224 74.6
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 1.5e-92 343.2 226 74.3
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 2.0e-92 342.8 236 69.9
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 2.0e-92 342.8 226 74.3
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 2.6e-92 342.4 221 73.8
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 3.3e-92 342.0 225 72.9
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 4.4e-92 341.7 224 75.0
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 5.7e-92 341.3 226 74.8
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 5.7e-92 341.3 229 72.1
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 1.7e-91 339.7 222 74.8
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.7e-91 339.7 226 72.1
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 4.8e-91 338.2 226 73.5
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 6.3e-91 337.8 221 76.0
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 6.3e-91 337.8 225 72.4
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 1.1e-90 337.0 227 70.9
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 1.8e-90 336.3 225 72.4
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 7.0e-90 334.3 221 73.8
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 7.0e-90 334.3 222 71.6
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 9.1e-90 334.0 228 71.5
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 1.2e-89 333.6 221 71.5
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 1.2e-89 333.6 227 71.8
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 2.0e-89 332.8 225 71.1
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 2.7e-89 332.4 231 69.7
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 3.5e-89 332.0 225 72.0
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 3.5e-89 332.0 225 70.2
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 3.5e-89 332.0 247 67.2
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 4.5e-89 331.6 233 70.0
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 4.5e-89 331.6 226 72.1
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 1.7e-88 329.7 228 68.4
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 2.2e-88 329.3 220 72.7
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 5.0e-88 328.2 223 70.4
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 5.0e-88 328.2 223 70.4
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 6.5e-88 327.8 221 69.7
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 6.5e-88 327.8 221 69.7
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 8.5e-88 327.4 221 69.7
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 8.5e-88 327.4 221 69.7
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 1.1e-87 327.0 224 69.2
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 5.5e-87 324.7 221 69.2
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 5.5e-87 324.7 225 70.7
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 1.2e-86 323.6 223 70.0
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.2e-86 323.6 245 65.7
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 1.6e-86 323.2 231 71.4
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 8.0e-86 320.9 228 71.5
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 5.2e-85 318.2 227 70.0
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 6.8e-85 317.8 246 64.6
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 1.2e-84 317.0 228 68.9
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 4.4e-84 315.1 224 67.4
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 5.7e-84 314.7 227 68.7
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 7.5e-84 314.3 205 74.1
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 9.8e-84 313.9 208 72.1
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 9.8e-84 313.9 211 72.0
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 2.2e-83 312.8 231 65.8
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 6.3e-83 311.2 210 72.4
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 1.4e-82 310.1 229 65.9
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 1.6e-81 306.6 206 71.4
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 7.7e-81 304.3 206 69.9
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 3.2e-79 298.9 207 69.1
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 4.2e-79 298.5 215 68.4
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 3.6e-78 295.4 226 65.9
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 3.6e-78 295.4 226 66.4
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 1.8e-77 293.1 231 65.4
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 1.8e-77 293.1 212 68.9
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.7e-75 286.6 239 61.9
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 1.7e-72 276.6 226 62.8
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 1.6e-70 270.0 231 60.6
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 1.0e-69 267.3 180 67.2
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 1.8e-69 266.5 152 81.6
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 2.3e-69 266.2 177 68.4
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 2.0e-68 263.1 211 64.9
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 2.6e-68 262.7 173 74.0
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 9.2e-66 254.2 225 58.2
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.3e-64 250.4 209 62.7
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 7.3e-63 244.6 226 56.2
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 8.9e-61 237.7 147 74.8
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 8.9e-61 237.7 328 45.1
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 2.0e-60 236.5 227 56.8
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 8.3e-59 231.1 152 71.1
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 2.0e-57 226.5 155 69.7
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 2.7e-57 226.1 162 63.0
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 1.0e-56 224.2 125 83.2
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 8.6e-56 221.1 145 77.2
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 1.2e-52 210.7 143 62.9
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 7.3e-47 191.4 190 52.1
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 1.7e-40 170.2 134 60.4
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 1.8e-37 160.2 159 49.1
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 4.9e-27 125.6 63 87.3
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.0e-24 117.9 86 62.8
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 2.3e-24 116.7 63 79.4
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.1e-23 114.4 90 64.4
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 3.3e-23 112.8 68 80.9
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 9.0e-21 104.8 144 43.1
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 4.9e-19 99.0 118 48.3


User provided reference genes

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