Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.9648 Avicennia marina HOM05D008132 ORTHO05D005763 2.3e-69 265.4 131 100.0
MSTRG.9644 Avicennia marina HOM05D008132 ORTHO05D005763 1.7e-27 126.3 135 59.3
MSTRG.9649 Avicennia marina HOM05D008132 ORTHO05D005763 3.3e-15 85.5 118 55.1
Migut.G00657 Erythranthe guttata HOM05D008132 ORTHO05D005763 1.8e-13 79.7 111 48.6
Migut.G01101 Erythranthe guttata HOM05D008132 ORTHO05D005763 1.8e-13 79.7 111 48.6
Migut.O00629 Erythranthe guttata HOM05D008132 ORTHO05D005763 1.8e-13 79.7 111 48.6
Migut.G01096 Erythranthe guttata HOM05D008132 ORTHO05D005763 2.0e-12 76.3 132 46.2
Migut.G01100 Erythranthe guttata HOM05D008132 ORTHO05D005763 1.7e-11 73.2 115 48.7
MSTRG.9643 Avicennia marina HOM05D008132 ORTHO05D005763 5.0e-11 71.6 137 43.8
Cpa.g.sc132.70 Carica papaya HOM05D008132 ORTHO05D005763 6.5e-11 71.2 123 48.0
Cpa.g.sc132.73 Carica papaya HOM05D008132 ORTHO05D005763 6.5e-11 71.2 123 48.0
Migut.G01155 Erythranthe guttata HOM05D008132 ORTHO05D005763 6.5e-11 71.2 139 44.6
arahy.Tifrunner.gnm1.ann1.5E44W3 Arachis hypogaea HOM05D008132 ORTHO05D005763 2.5e-10 69.3 122 45.1
Migut.G00827 Erythranthe guttata HOM05D008132 ORTHO05D005763 2.5e-10 69.3 142 45.1
Oeu022674.1 Olea europaea HOM05D008132 ORTHO05D005763 3.2e-10 68.9 130 46.2
Nitab4.5_0000037g0280 Nicotiana tabacum HOM05D008132 ORTHO05D005763 7.2e-10 67.8 119 40.3
MSTRG.4386 Avicennia marina HOM05D008132 ORTHO05D005763 1.0e-08 63.9 116 39.7
Medtr5g084330 Medicago truncatula HOM05D009657 ORTHO05D005763 1.3e-08 63.5 136 39.0
Sopen09g035750 Solanum pennellii HOM05D012878 ORTHO05D005763 1.8e-08 63.2 135 39.3
Eucgr.A01080 Eucalyptus grandis HOM05D008132 ORTHO05D005763 2.3e-08 62.8 144 36.8
Migut.G00825 Erythranthe guttata HOM05D008132 ORTHO05D005763 3.9e-08 62.0 164 39.6
MSTRG.9642 Avicennia marina HOM05D008132 ORTHO05D005763 5.1e-08 61.6 132 44.7
Actinidia09763 Actinidia chinensis HOM05D008132 ORTHO05D005763 6.7e-08 61.2 155 38.1
CAN.G2020.3 Capsicum annuum HOM05D012878 ORTHO05D005763 6.7e-08 61.2 123 41.5
Glyma.20G011500 Glycine max HOM05D021502 ORTHO05D005763 1.1e-07 60.5 118 34.7
Nn1g09274 Nelumbo nucifera HOM05D008132 ORTHO05D005763 1.9e-07 59.7 132 41.7
Nitab4.5_0000037g0290 Nicotiana tabacum HOM05D008132 ORTHO05D005763 1.9e-07 59.7 118 37.3
THA.LOC104826607 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 1.9e-07 59.7 129 41.9
EL10Ac9g22778 Beta vulgaris HOM05D008132 ORTHO05D005763 4.3e-07 58.5 133 42.1
PGR042G0640 Punica granatum HOM05D008132 ORTHO05D005763 4.3e-07 58.5 111 45.9
THA.LOC104815348 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 4.3e-07 58.5 109 40.4
CARHR103240 Cardamine hirsuta HOM05D008158 ORTHO05D010323 5.7e-07 58.2 116 42.2
CiPaw.03G275800 Carya illinoinensis HOM05D052008 ORTHO05D005763 5.7e-07 58.2 119 43.7
SGA_v2.0_scaffold308G48098 Striga asiatica HOM05D002768 ORTHO05D002993 5.7e-07 58.2 87 44.8
QL08p029862 Quercus lobata HOM05D008132 ORTHO05D005763 7.4e-07 57.8 135 40.0
Medtr1g033630 Medicago truncatula HOM05D021502 ORTHO05D005763 1.3e-06 57.0 112 42.0
PGR042G2058 Punica granatum HOM05D008132 ORTHO05D005763 1.3e-06 57.0 124 42.7
Cc03_g08950 Coffea canephora HOM05D008132 ORTHO05D005763 4.8e-06 55.1 139 39.6
PGSC0003DMG400031552 Solanum tuberosum HOM05D008132 ORTHO05D005763 4.8e-06 55.1 40 57.5
arahy.Tifrunner.gnm1.ann1.V70XEM Arachis hypogaea HOM05D064469 ORTHO05D005763 8.2e-06 54.3 114 42.1


User provided reference genes

Program Settings