Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.9544 Avicennia marina HOM05D008031 ORTHO05D010063 8.7e-75 283.5 137 100.0
SGA_v2.0_scaffold71G23934 Striga asiatica HOM05D008031 ORTHO05D010063 2.3e-19 99.4 142 47.2
Hma1.2p1_0090F.1_g045750 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 2.8e-17 92.4 143 41.3
Hma1.2p1_2628F.1_g325675 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 2.8e-17 92.4 143 41.3
Oeu019510.1 Olea europaea HOM05D008031 ORTHO05D010063 4.8e-17 91.7 150 44.0
Migut.I01137 Erythranthe guttata HOM05D008031 ORTHO05D010063 2.4e-16 89.4 149 40.9
Peaxi162Scf00038g02327 Petunia axillaris HOM05D008031 ORTHO05D010063 2.4e-16 89.4 152 40.1
Thecc.06G130800 Theobroma cacao HOM05D008031 ORTHO05D010063 1.6e-15 86.7 147 40.1
Oeu053417.1 Olea europaea HOM05D008031 ORTHO05D010063 2.0e-15 86.3 146 41.8
Solyc03g123670.3 Solanum lycopersicum HOM05D008031 ORTHO05D010063 3.5e-15 85.5 148 39.9
Sopen03g041440 Solanum pennellii HOM05D008031 ORTHO05D010063 7.7e-15 84.3 148 39.9
PGSC0003DMG400009151 Solanum tuberosum HOM05D008031 ORTHO05D010063 1.0e-14 84.0 146 39.7
COL.COLO4_30875 Corchorus olitorius HOM05D008031 ORTHO05D010063 3.8e-14 82.0 147 39.5
Duzib235G0155 Durio zibethinus HOM05D008031 ORTHO05D010063 5.0e-14 81.6 139 38.8
Potri.003G073200 Populus trichocarpa HOM05D008031 ORTHO05D010063 6.5e-14 81.3 146 38.4
GSVIVG01016662001 Vitis vinifera HOM05D008031 ORTHO05D010063 6.5e-14 81.3 147 38.1
Ciclev10027015m.g Citrus clementina HOM05D008031 ORTHO05D010063 8.5e-14 80.9 144 38.9
Oeu015468.1 Olea europaea HOM05D008031 ORTHO05D010063 8.5e-14 80.9 137 43.8
Actinidia21841 Actinidia chinensis HOM05D008031 ORTHO05D010063 3.2e-13 79.0 153 40.5
TAR626G1534 Trochodendron aralioides HOM05D008031 ORTHO05D010063 7.2e-13 77.8 141 40.4
Cc04_g00650 Coffea canephora HOM05D008031 ORTHO05D010063 9.4e-13 77.4 142 38.0
Nitab4.5_0006966g0010 Nicotiana tabacum HOM05D008031 ORTHO05D010063 9.4e-13 77.4 113 43.4
Nitab4.5_0006338g0010 Nicotiana tabacum HOM05D008031 ORTHO05D010063 1.6e-12 76.6 151 35.1
Atru.chr1.4161 Acer truncatum HOM05D008031 ORTHO05D010063 2.7e-12 75.9 149 37.6
Gohir.A10G048037 Gossypium hirsutum HOM05D001728 ORTHO05D004321 3.6e-12 75.5 147 39.5
CSS0025062 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004321 4.7e-12 75.1 150 38.7
TWI14G1127 Tripterygium wilfordii HOM05D008031 ORTHO05D010063 4.7e-12 75.1 139 38.1
Gohir.D10G051032 Gossypium hirsutum HOM05D001728 ORTHO05D004321 6.1e-12 74.7 147 38.8
Gorai.011G054900 Gossypium raimondii HOM05D001728 ORTHO05D004321 6.1e-12 74.7 147 38.8
Atru.chr1.4165 Acer truncatum HOM05D008031 ORTHO05D010063 8.0e-12 74.3 149 39.6
CiPaw.02G130600 Carya illinoinensis HOM05D008031 ORTHO05D010063 8.0e-12 74.3 145 38.6
Rhsim08G0245200 Rhododendron simsii HOM05D008031 ORTHO05D010063 8.0e-12 74.3 148 39.2
CANSAT56G3277 Cannabis sativa HOM05D008031 ORTHO05D010063 8.8e-11 70.9 140 36.4
MBI19_g32875_MAGBIO Magnolia biondii HOM05D008031 ORTHO05D010063 8.8e-11 70.9 144 36.1
Lj3g0013752 Lotus japonicus HOM05D008031 ORTHO05D010063 1.2e-10 70.5 148 37.2
Cpa.g.sc25.199 Carica papaya HOM05D008031 ORTHO05D010063 9.8e-10 67.4 142 38.7
CiPaw.01G211000 Carya illinoinensis HOM05D008031 ORTHO05D010063 1.7e-09 66.6 145 37.9
CsaV3_3G031060 Cucumis sativus L. HOM05D008031 ORTHO05D010063 1.7e-09 66.6 140 34.3
FvH4_6g35970 Fragaria vesca HOM05D008031 ORTHO05D010063 2.8e-09 65.9 144 34.7
FAN09G4453 Fragaria x ananassa HOM05D008031 ORTHO05D010063 2.8e-09 65.9 144 34.7
FAN14G4753 Fragaria x ananassa HOM05D008031 ORTHO05D010063 2.8e-09 65.9 144 34.7
Haze_16140 Corylus avellana HOM05D001728 ORTHO05D004321 4.8e-09 65.1 143 36.4
QL05p001111 Quercus lobata HOM05D008031 ORTHO05D010063 1.1e-08 63.9 140 35.0
Actinidia24421 Actinidia chinensis HOM05D001728 ORTHO05D004321 1.4e-08 63.5 151 36.4
Medtr8g023390 Medicago truncatula HOM05D008031 ORTHO05D010063 1.4e-08 63.5 154 32.5
Aqoxy7G04192 Aquilegia oxysepala HOM05D008031 ORTHO05D010063 1.8e-08 63.2 151 33.8
PGR102G3014 Punica granatum HOM05D008031 ORTHO05D010063 3.1e-08 62.4 150 34.0
VMungo0331G1222 Vigna mungo HOM05D008031 ORTHO05D010063 4.1e-08 62.0 152 35.5
MELO3C022708.2 Cucumis melo HOM05D008031 ORTHO05D010063 5.4e-08 61.6 140 32.1
Eucgr.J02592 Eucalyptus grandis HOM05D008031 ORTHO05D010063 2.0e-07 59.7 156 34.0
Sed0024761 Sechium edule HOM05D008031 ORTHO05D010063 2.7e-07 59.3 139 31.7
ClCG07G014260 Citrullus lanatus HOM05D008031 ORTHO05D010063 1.7e-06 56.6 139 30.2


User provided reference genes

Program Settings